| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is queF [H]
Identifier: 103488539
GI number: 103488539
Start: 3214550
End: 3215020
Strand: Direct
Name: queF [H]
Synonym: Sala_3063
Alternate gene names: 103488539
Gene position: 3214550-3215020 (Clockwise)
Preceding gene: 103488533
Following gene: 103488540
Centisome position: 96.1
GC content: 66.45
Gene sequence:
>471_bases ATGACCGATTCCACCCCCACGCCGCTGGTGCCCAAACATCTTGGCCAATCGAGCGAACTGCCTGCCTCGCCCGAGGCCGC CGTGCTCGACTATGTGCCCAATCCGCGCGCGGGCGAGCTTTATCTCGTCCGCTTCGCCGCGCCCGAGTTCACCTCGCTCT GCCCGGTGACCGGCCAGCCCGATTTCGCGCATCTGGTGATCGACTATGCGCCCGGCGAAACGATCGTCGAATCGAAGAGC CTCAAGCTGTTCCTCGGTTCTTTCCGCAACCATGCCGGTTTTCACGAGGATTGCACCGTCGGCATCGGCCGCCGCCTGTT CGACGAGATGCAGCCGCAATGGCTGCGCATCGGCGGTTACTGGTATCCGCGCGGGGGCATCCCGATCGACGTTTTCTGGC AGTCGGGCCCGCCGCCTGCCGGACTGTGGCTCCCCGACCAGGGCGTCGCGCCCTATCGCGGGCGGGGGTGA
Upstream 100 bases:
>100_bases TATCCATATCTCGCCTGCGCCGGTGAATTGGCGCTGAACCCGGCGACATTCGCCTCACGAGGTCGATGACATCGACCGCG CTGCGCACTAGAGCGATTCC
Downstream 100 bases:
>100_bases TATTTCATCTTTCCGTCACATTTTGTTGACACTAGTGTAAACGATATGGCGACAGCCTCGCTCCCGCACGATCATCCCAT TGCCGTCGGCGCCGACGCCA
Product: 7-cyano-7-deazaguanine reductase
Products: NA
Alternate protein names: 7-cyano-7-carbaguanine reductase; NADPH-dependent nitrile oxidoreductase; PreQ(0) reductase [H]
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTDSTPTPLVPKHLGQSSELPASPEAAVLDYVPNPRAGELYLVRFAAPEFTSLCPVTGQPDFAHLVIDYAPGETIVESKS LKLFLGSFRNHAGFHEDCTVGIGRRLFDEMQPQWLRIGGYWYPRGGIPIDVFWQSGPPPAGLWLPDQGVAPYRGRG
Sequences:
>Translated_156_residues MTDSTPTPLVPKHLGQSSELPASPEAAVLDYVPNPRAGELYLVRFAAPEFTSLCPVTGQPDFAHLVIDYAPGETIVESKS LKLFLGSFRNHAGFHEDCTVGIGRRLFDEMQPQWLRIGGYWYPRGGIPIDVFWQSGPPPAGLWLPDQGVAPYRGRG >Mature_155_residues TDSTPTPLVPKHLGQSSELPASPEAAVLDYVPNPRAGELYLVRFAAPEFTSLCPVTGQPDFAHLVIDYAPGETIVESKSL KLFLGSFRNHAGFHEDCTVGIGRRLFDEMQPQWLRIGGYWYPRGGIPIDVFWQSGPPPAGLWLPDQGVAPYRGRG
Specific function: Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) [H]
COG id: COG0780
COG function: function code R; Enzyme related to GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016856 - InterPro: IPR020602 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =1.7.1.13 [H]
Molecular weight: Translated: 17134; Mature: 17002
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSTPTPLVPKHLGQSSELPASPEAAVLDYVPNPRAGELYLVRFAAPEFTSLCPVTGQP CCCCCCCCCCHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCC DFAHLVIDYAPGETIVESKSLKLFLGSFRNHAGFHEDCTVGIGRRLFDEMQPQWLRIGGY CEEEEEEEECCCCEEECCCCEEEEEEHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEECCE WYPRGGIPIDVFWQSGPPPAGLWLPDQGVAPYRGRG EECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TDSTPTPLVPKHLGQSSELPASPEAAVLDYVPNPRAGELYLVRFAAPEFTSLCPVTGQP CCCCCCCCCHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCC DFAHLVIDYAPGETIVESKSLKLFLGSFRNHAGFHEDCTVGIGRRLFDEMQPQWLRIGGY CEEEEEEEECCCCEEECCCCEEEEEEHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEECCE WYPRGGIPIDVFWQSGPPPAGLWLPDQGVAPYRGRG EECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA