The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

Click here to switch to the map view.

The map label for this gene is fadB1 [H]

Identifier: 103488531

GI number: 103488531

Start: 3205657

End: 3206439

Strand: Direct

Name: fadB1 [H]

Synonym: Sala_3055

Alternate gene names: 103488531

Gene position: 3205657-3206439 (Clockwise)

Preceding gene: 103488530

Following gene: 103488532

Centisome position: 95.83

GC content: 64.5

Gene sequence:

>783_bases
ATGACCTACGAAACCCTCCTCGTCGAAACGCGCGGCGCCGTCACCTTGGTGACGCTCAACCGCCCGCAGGCGCTGAATGC
GCTCAATTCGGGCGTGCTCGACGACCTCATCGCCGCCTTCGCGGCGTTCGAGGCCGATGAGAGCCAGCGTTGCGCGGTGC
TCACCGGATCGGGCGACAAGGCGTTCGCCGCAGGCGCTGACATCAAGGAGATGGCCGACAAGCCCGCCGCCGATTTCTAC
CTCGAAGATTTCTTCTCGAAATGGACGAGCGATTTCGTGAAAAAGGTGCGCAAGCCGTGGATCGCGGCGGTCAACGGCTT
CGCGCTCGGCGGCGGCTGCGAACTGGCGATGATGGCCGATTTCATCATCGCGTCGGACAGGGCCAAATTCGGCCAGCCCG
AAATCAAGCTTGGCGTCGCGCCGGGCATGGGCGGATCGCAGCGGCTGACGCGCGCGATCGGCAAGGCGAAGGCGATGGAA
ATGTGCCTGACCGGGCGGATGATGGACGCCGAGGAAGCCGAACGGTCGGGCCTCGTCGCGCGCGTGGTCCAGCACGAGAG
CCTCGTCGATGAAGCCGTGAAGACCGCGACGCTGATCGCATCGATGCCGCCGATGGCCGCAATGGTGAACAAGGATATGG
TCAACGCCGCGTTCGAAACGACGCTCGACCAGGGGCTGATCTACGAACGCCGCCTGTTCCAGATCCTCGCCGCGACCGAG
GACAAGGCCGAAGGCATGGCGGCCTTTATCGAAAAGCGCGAAGGCGTGTGGAAGGGGCGGTGA

Upstream 100 bases:

>100_bases
CGAGACATGGACCCCTCTAACTTGAACCGTCACCCCGGCGAAGGCCGGGGTTCACCGTCGAGATTCCGGCCTTCGCCGGA
ATGACGAAGGAGATTGCCAA

Downstream 100 bases:

>100_bases
CCTTCTAAGCCCTCTCCCCTTCAGGGGAGAGGGTTGGGAGAGGGGGGCGCGGGCAGAGCTGCACGTCGTACCCCTCTCCA
ACTAGGGCTAGGCGCTTCGC

Product: enoyl-CoA hydratase/isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MTYETLLVETRGAVTLVTLNRPQALNALNSGVLDDLIAAFAAFEADESQRCAVLTGSGDKAFAAGADIKEMADKPAADFY
LEDFFSKWTSDFVKKVRKPWIAAVNGFALGGGCELAMMADFIIASDRAKFGQPEIKLGVAPGMGGSQRLTRAIGKAKAME
MCLTGRMMDAEEAERSGLVARVVQHESLVDEAVKTATLIASMPPMAAMVNKDMVNAAFETTLDQGLIYERRLFQILAATE
DKAEGMAAFIEKREGVWKGR

Sequences:

>Translated_260_residues
MTYETLLVETRGAVTLVTLNRPQALNALNSGVLDDLIAAFAAFEADESQRCAVLTGSGDKAFAAGADIKEMADKPAADFY
LEDFFSKWTSDFVKKVRKPWIAAVNGFALGGGCELAMMADFIIASDRAKFGQPEIKLGVAPGMGGSQRLTRAIGKAKAME
MCLTGRMMDAEEAERSGLVARVVQHESLVDEAVKTATLIASMPPMAAMVNKDMVNAAFETTLDQGLIYERRLFQILAATE
DKAEGMAAFIEKREGVWKGR
>Mature_259_residues
TYETLLVETRGAVTLVTLNRPQALNALNSGVLDDLIAAFAAFEADESQRCAVLTGSGDKAFAAGADIKEMADKPAADFYL
EDFFSKWTSDFVKKVRKPWIAAVNGFALGGGCELAMMADFIIASDRAKFGQPEIKLGVAPGMGGSQRLTRAIGKAKAMEM
CLTGRMMDAEEAERSGLVARVVQHESLVDEAVKTATLIASMPPMAAMVNKDMVNAAFETTLDQGLIYERRLFQILAATED
KAEGMAAFIEKREGVWKGR

Specific function: Could possibly oxidize fatty acids using specific components [H]

COG id: COG1024

COG function: function code I; Enoyl-CoA hydratase/carnithine racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]

Homologues:

Organism=Homo sapiens, GI194097323, Length=260, Percent_Identity=50.7692307692308, Blast_Score=249, Evalue=2e-66,
Organism=Homo sapiens, GI4502327, Length=257, Percent_Identity=35.7976653696498, Blast_Score=112, Evalue=3e-25,
Organism=Homo sapiens, GI70995211, Length=267, Percent_Identity=31.4606741573034, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI37594471, Length=227, Percent_Identity=28.6343612334802, Blast_Score=105, Evalue=5e-23,
Organism=Homo sapiens, GI37594469, Length=227, Percent_Identity=28.6343612334802, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI31542718, Length=252, Percent_Identity=29.7619047619048, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI260274832, Length=221, Percent_Identity=31.6742081447964, Blast_Score=98, Evalue=7e-21,
Organism=Homo sapiens, GI45643119, Length=221, Percent_Identity=31.6742081447964, Blast_Score=98, Evalue=8e-21,
Organism=Homo sapiens, GI260275230, Length=221, Percent_Identity=31.6742081447964, Blast_Score=98, Evalue=8e-21,
Organism=Homo sapiens, GI68989263, Length=282, Percent_Identity=27.3049645390071, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI20127408, Length=183, Percent_Identity=35.5191256830601, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI25453481, Length=258, Percent_Identity=25.968992248062, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI51538573, Length=258, Percent_Identity=25.968992248062, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI150378541, Length=251, Percent_Identity=30.2788844621514, Blast_Score=88, Evalue=6e-18,
Organism=Homo sapiens, GI4757966, Length=256, Percent_Identity=26.171875, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI51538581, Length=256, Percent_Identity=26.171875, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI4757968, Length=259, Percent_Identity=25.4826254826255, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI49355787, Length=259, Percent_Identity=25.4826254826255, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI221136756, Length=255, Percent_Identity=25.4901960784314, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI221136753, Length=255, Percent_Identity=25.4901960784314, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI221307494, Length=255, Percent_Identity=25.4901960784314, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI261878539, Length=185, Percent_Identity=28.1081081081081, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI157694516, Length=232, Percent_Identity=24.1379310344828, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI213417737, Length=232, Percent_Identity=24.1379310344828, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI62530384, Length=202, Percent_Identity=25.7425742574257, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI116235487, Length=202, Percent_Identity=26.2376237623762, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI1787659, Length=255, Percent_Identity=42.7450980392157, Blast_Score=200, Evalue=7e-53,
Organism=Escherichia coli, GI221142681, Length=265, Percent_Identity=39.622641509434, Blast_Score=167, Evalue=7e-43,
Organism=Escherichia coli, GI1787660, Length=262, Percent_Identity=35.1145038167939, Blast_Score=120, Evalue=7e-29,
Organism=Escherichia coli, GI1788597, Length=249, Percent_Identity=34.136546184739, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI87082183, Length=263, Percent_Identity=31.1787072243346, Blast_Score=111, Evalue=6e-26,
Organism=Escherichia coli, GI1790281, Length=184, Percent_Identity=34.7826086956522, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1788682, Length=189, Percent_Identity=31.7460317460317, Blast_Score=89, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17554946, Length=247, Percent_Identity=49.7975708502024, Blast_Score=236, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI25145438, Length=244, Percent_Identity=50, Blast_Score=229, Evalue=8e-61,
Organism=Caenorhabditis elegans, GI17560910, Length=252, Percent_Identity=37.3015873015873, Blast_Score=140, Evalue=7e-34,
Organism=Caenorhabditis elegans, GI17540714, Length=225, Percent_Identity=33.3333333333333, Blast_Score=124, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI25144160, Length=194, Percent_Identity=31.4432989690722, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI25144157, Length=194, Percent_Identity=31.4432989690722, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17540306, Length=235, Percent_Identity=30.6382978723404, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17558304, Length=234, Percent_Identity=27.7777777777778, Blast_Score=94, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17549921, Length=214, Percent_Identity=29.9065420560748, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI25144276, Length=232, Percent_Identity=29.3103448275862, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17508951, Length=232, Percent_Identity=29.3103448275862, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17508953, Length=232, Percent_Identity=29.3103448275862, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17535521, Length=231, Percent_Identity=28.1385281385281, Blast_Score=87, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17536985, Length=241, Percent_Identity=28.2157676348548, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI25141363, Length=205, Percent_Identity=29.2682926829268, Blast_Score=65, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6320241, Length=194, Percent_Identity=26.8041237113402, Blast_Score=81, Evalue=2e-16,
Organism=Drosophila melanogaster, GI20129971, Length=240, Percent_Identity=53.75, Blast_Score=252, Evalue=1e-67,
Organism=Drosophila melanogaster, GI24653477, Length=240, Percent_Identity=53.75, Blast_Score=252, Evalue=1e-67,
Organism=Drosophila melanogaster, GI24653139, Length=256, Percent_Identity=33.203125, Blast_Score=128, Evalue=3e-30,
Organism=Drosophila melanogaster, GI24650670, Length=239, Percent_Identity=33.4728033472803, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI21357171, Length=249, Percent_Identity=30.9236947791165, Blast_Score=118, Evalue=4e-27,
Organism=Drosophila melanogaster, GI19920382, Length=266, Percent_Identity=30.8270676691729, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI28571729, Length=179, Percent_Identity=29.608938547486, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI28571730, Length=179, Percent_Identity=30.1675977653631, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI19922422, Length=275, Percent_Identity=28.7272727272727, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24654903, Length=219, Percent_Identity=26.9406392694064, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24583165, Length=250, Percent_Identity=26, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI19921000, Length=174, Percent_Identity=33.9080459770115, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24583077, Length=174, Percent_Identity=33.9080459770115, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24583079, Length=174, Percent_Identity=33.9080459770115, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014748
- InterPro:   IPR001753
- InterPro:   IPR018376 [H]

Pfam domain/function: PF00378 ECH [H]

EC number: =4.2.1.17 [H]

Molecular weight: Translated: 28075; Mature: 27943

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00166 ENOYL_COA_HYDRATASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MTYETLLVETRGAVTLVTLNRPQALNALNSGVLDDLIAAFAAFEADESQRCAVLTGSGDK
CCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
AFAAGADIKEMADKPAADFYLEDFFSKWTSDFVKKVRKPWIAAVNGFALGGGCELAMMAD
CEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEECCCCHHHHHHH
FIIASDRAKFGQPEIKLGVAPGMGGSQRLTRAIGKAKAMEMCLTGRMMDAEEAERSGLVA
HHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
RVVQHESLVDEAVKTATLIASMPPMAAMVNKDMVNAAFETTLDQGLIYERRLFQILAATE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DKAEGMAAFIEKREGVWKGR
HHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TYETLLVETRGAVTLVTLNRPQALNALNSGVLDDLIAAFAAFEADESQRCAVLTGSGDK
CCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
AFAAGADIKEMADKPAADFYLEDFFSKWTSDFVKKVRKPWIAAVNGFALGGGCELAMMAD
CEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEECCCCHHHHHHH
FIIASDRAKFGQPEIKLGVAPGMGGSQRLTRAIGKAKAMEMCLTGRMMDAEEAERSGLVA
HHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
RVVQHESLVDEAVKTATLIASMPPMAAMVNKDMVNAAFETTLDQGLIYERRLFQILAATE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DKAEGMAAFIEKREGVWKGR
HHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7751302; 11481430 [H]