| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
Click here to switch to the map view.
The map label for this gene is uxaC
Identifier: 103488522
GI number: 103488522
Start: 3196593
End: 3198005
Strand: Direct
Name: uxaC
Synonym: Sala_3046
Alternate gene names: 103488522
Gene position: 3196593-3198005 (Clockwise)
Preceding gene: 103488521
Following gene: 103488523
Centisome position: 95.56
GC content: 65.46
Gene sequence:
>1413_bases GTGCCGCGTCCGCTGTACCTGTCACCCGACCGCCTCTTCCCGTCCGACCCGGCGCAGCGCGACATCGCGCGCCGGCTGTA TAAGGCGGTCGCAGGTCTGCCGATCGTCAGCCCGCACGGCCACACCGATCCGGCATGGTTCGCGGGCGATGCGCCGTTCG GCAATGCTGCGGAGCTGCTGCTCCATCCCGATCATTATGTGTTCCGCATGCTCTATTCGCAGGGGGTGTCGCTCGACGCG CTCGGGATCGGCAACGCCGACGCCGACCCGCGCGAGAGCTGGCGGCTGTTCGCTGAAAACTACCATCTCTTCCGCGCCAC CCCGTCACGGATGTGGATGGACTGGGTGTTCGCCGAGGTGTTTGGCTTCGACGTGCAATTATCGGCAGAGACGTCGGACC TTTATTACGACCGCATCACCGAAGCACTGGCGATCGACGCCTTTCGCCCGCGCGCGCTGTTTGACCGCTTCGGGATCGAG GTGATCGCGACGACCGAAAGCCCGCTCGACAGCCTCGACCATCACGCCGTCATCCGCGCCGCCAACGCCAGCGGCGAGTG GGGCGGGCGCGTTATTACGGCCTATCGCCCCGATCCCGTGGTCGATCCCGAATTTGAAGGATTCCGCGACAATCTTGCGC GTTTCTCCAACCTGTCGGGCGAGGATGCATTCAGCTATTCGGGCTATCTCGCGGCACATCGCAAGCGCCGCGCCTTCTTC GCCAGCATGGGTGCGACCTCGACCGATCACGGGCACCCGAGCGCGGCGACCGCCGATCTGTCGGAGACGCAAGCCGAGGC GCTGTTCGCGCGCGTTACGGGCGAGGATATGAGCGCCGCCGACGCCGAGCTGTTCCGCGCGCATATGCTGACGGTGATGG CGGGGATGAGCCTCGACGACGGCCTCGTCATGCAGATCCACCCCGGCGCCTTCCGCAACCACAACCCCTGGTTGTTCGCG AATCATGGCCGCGACAAGGGCGCCGACATCCCGACCGCAACCGATTATGTCCACGCGCTGCGCCCGCTGCTTGGGCGTTA TGGCAATGAGGCGGATCTGACGATCATCCTCTTCACGCTCGACGAGACGAGCTATGCGCGCGAACTCGCGCCGCTCGCCG GCCATTATCCGGCGCTGAAGCTGGGTCCGGCGTGGTGGTTCCACGACAGTCCCGAAGGGATGCGGCGCTTCCGGTCGCAG ATGACCGAGACCGCGGGCTTCTACAACACCGTCGGTTTCAACGACGACACGCGCGCCTTCCTGTCGATCCCCGCGCGGCA CGATGTCGCGCGGCGCATCGACTGCGGCTTTTTGGCCCAACTCGTTTCCGAGCACCGGCTCGAGGAATGGGAGGCCGCCG AACTCGCGGCCGATCTCAGCTACAATCTCGCCAAGGCGTCCTACAAACTGTGA
Upstream 100 bases:
>100_bases TTCGCCGCCTGCACCACCGTCTATTTCCTCGCGGTGCTCGCGGTGCATATCCTCAGCCCGCGCCTCGCGCCGGTCAGCGT CGAAGGCGCGAAATAGGCCC
Downstream 100 bases:
>100_bases GGCTTGGTCCCGACACGCCGCTCCCGGCCTCGGTGCAGGCGCCGGGCTACGACCGCGCCGCGCAGGCCGCCGGTATCGTT CATATCGGCATCGGCGCCTT
Product: glucuronate isomerase
Products: NA
Alternate protein names: Glucuronate isomerase; Uronic isomerase
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MPRPLYLSPDRLFPSDPAQRDIARRLYKAVAGLPIVSPHGHTDPAWFAGDAPFGNAAELLLHPDHYVFRMLYSQGVSLDA LGIGNADADPRESWRLFAENYHLFRATPSRMWMDWVFAEVFGFDVQLSAETSDLYYDRITEALAIDAFRPRALFDRFGIE VIATTESPLDSLDHHAVIRAANASGEWGGRVITAYRPDPVVDPEFEGFRDNLARFSNLSGEDAFSYSGYLAAHRKRRAFF ASMGATSTDHGHPSAATADLSETQAEALFARVTGEDMSAADAELFRAHMLTVMAGMSLDDGLVMQIHPGAFRNHNPWLFA NHGRDKGADIPTATDYVHALRPLLGRYGNEADLTIILFTLDETSYARELAPLAGHYPALKLGPAWWFHDSPEGMRRFRSQ MTETAGFYNTVGFNDDTRAFLSIPARHDVARRIDCGFLAQLVSEHRLEEWEAAELAADLSYNLAKASYKL
Sequences:
>Translated_470_residues MPRPLYLSPDRLFPSDPAQRDIARRLYKAVAGLPIVSPHGHTDPAWFAGDAPFGNAAELLLHPDHYVFRMLYSQGVSLDA LGIGNADADPRESWRLFAENYHLFRATPSRMWMDWVFAEVFGFDVQLSAETSDLYYDRITEALAIDAFRPRALFDRFGIE VIATTESPLDSLDHHAVIRAANASGEWGGRVITAYRPDPVVDPEFEGFRDNLARFSNLSGEDAFSYSGYLAAHRKRRAFF ASMGATSTDHGHPSAATADLSETQAEALFARVTGEDMSAADAELFRAHMLTVMAGMSLDDGLVMQIHPGAFRNHNPWLFA NHGRDKGADIPTATDYVHALRPLLGRYGNEADLTIILFTLDETSYARELAPLAGHYPALKLGPAWWFHDSPEGMRRFRSQ MTETAGFYNTVGFNDDTRAFLSIPARHDVARRIDCGFLAQLVSEHRLEEWEAAELAADLSYNLAKASYKL >Mature_469_residues PRPLYLSPDRLFPSDPAQRDIARRLYKAVAGLPIVSPHGHTDPAWFAGDAPFGNAAELLLHPDHYVFRMLYSQGVSLDAL GIGNADADPRESWRLFAENYHLFRATPSRMWMDWVFAEVFGFDVQLSAETSDLYYDRITEALAIDAFRPRALFDRFGIEV IATTESPLDSLDHHAVIRAANASGEWGGRVITAYRPDPVVDPEFEGFRDNLARFSNLSGEDAFSYSGYLAAHRKRRAFFA SMGATSTDHGHPSAATADLSETQAEALFARVTGEDMSAADAELFRAHMLTVMAGMSLDDGLVMQIHPGAFRNHNPWLFAN HGRDKGADIPTATDYVHALRPLLGRYGNEADLTIILFTLDETSYARELAPLAGHYPALKLGPAWWFHDSPEGMRRFRSQM TETAGFYNTVGFNDDTRAFLSIPARHDVARRIDCGFLAQLVSEHRLEEWEAAELAADLSYNLAKASYKL
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG1904
COG function: function code G; Glucuronate isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uronate isomerase family
Homologues:
Organism=Escherichia coli, GI2367192, Length=450, Percent_Identity=29.3333333333333, Blast_Score=171, Evalue=9e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UXAC_SPHAL (Q1GNM2)
Other databases:
- EMBL: CP000356 - RefSeq: YP_618083.1 - ProteinModelPortal: Q1GNM2 - SMR: Q1GNM2 - GeneID: 4083054 - GenomeReviews: CP000356_GR - KEGG: sal:Sala_3046 - NMPDR: fig|317655.9.peg.2900 - HOGENOM: HBG293306 - OMA: AWAKTVP - ProtClustDB: PRK02925 - BioCyc: SALA317655:SALA_3046-MONOMER - BRENDA: 5.3.1.12 - HAMAP: MF_00675 - InterPro: IPR003766 - InterPro: IPR023177 - Gene3D: G3DSA:1.10.2020.10
Pfam domain/function: PF02614 UxaC
EC number: =5.3.1.12
Molecular weight: Translated: 52409; Mature: 52278
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRPLYLSPDRLFPSDPAQRDIARRLYKAVAGLPIVSPHGHTDPAWFAGDAPFGNAAELL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCEECCCCCCCCCEEEE LHPDHYVFRMLYSQGVSLDALGIGNADADPRESWRLFAENYHLFRATPSRMWMDWVFAEV ECCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCEEEEEECHHHHHHHHHHHHH FGFDVQLSAETSDLYYDRITEALAIDAFRPRALFDRFGIEVIATTESPLDSLDHHAVIRA HCCCEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEEECCCCHHHCCCCEEEEE ANASGEWGGRVITAYRPDPVVDPEFEGFRDNLARFSNLSGEDAFSYSGYLAAHRKRRAFF CCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH ASMGATSTDHGHPSAATADLSETQAEALFARVTGEDMSAADAELFRAHMLTVMAGMSLDD HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC GLVMQIHPGAFRNHNPWLFANHGRDKGADIPTATDYVHALRPLLGRYGNEADLTIILFTL CEEEEECCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEE DETSYARELAPLAGHYPALKLGPAWWFHDSPEGMRRFRSQMTETAGFYNTVGFNDDTRAF CCHHHHHHHHHHHCCCCCEEECCEEEECCCHHHHHHHHHHHHHHCCCCEECCCCCCCCEE LSIPARHDVARRIDCGFLAQLVSEHRLEEWEAAELAADLSYNLAKASYKL EECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PRPLYLSPDRLFPSDPAQRDIARRLYKAVAGLPIVSPHGHTDPAWFAGDAPFGNAAELL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCEECCCCCCCCCEEEE LHPDHYVFRMLYSQGVSLDALGIGNADADPRESWRLFAENYHLFRATPSRMWMDWVFAEV ECCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCEEEEEECHHHHHHHHHHHHH FGFDVQLSAETSDLYYDRITEALAIDAFRPRALFDRFGIEVIATTESPLDSLDHHAVIRA HCCCEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEEECCCCHHHCCCCEEEEE ANASGEWGGRVITAYRPDPVVDPEFEGFRDNLARFSNLSGEDAFSYSGYLAAHRKRRAFF CCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH ASMGATSTDHGHPSAATADLSETQAEALFARVTGEDMSAADAELFRAHMLTVMAGMSLDD HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC GLVMQIHPGAFRNHNPWLFANHGRDKGADIPTATDYVHALRPLLGRYGNEADLTIILFTL CEEEEECCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEE DETSYARELAPLAGHYPALKLGPAWWFHDSPEGMRRFRSQMTETAGFYNTVGFNDDTRAF CCHHHHHHHHHHHCCCCCEEECCEEEECCCHHHHHHHHHHHHHHCCCCEECCCCCCCCEE LSIPARHDVARRIDCGFLAQLVSEHRLEEWEAAELAADLSYNLAKASYKL EECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA