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The map label for this gene is yagH [H]

Identifier: 103488518

GI number: 103488518

Start: 3191320

End: 3192933

Strand: Direct

Name: yagH [H]

Synonym: Sala_3042

Alternate gene names: 103488518

Gene position: 3191320-3192933 (Clockwise)

Preceding gene: 103488517

Following gene: 103488520

Centisome position: 95.4

GC content: 65.99

Gene sequence:

>1614_bases
ATGACCGACCGCCGCGATTTGCTCAAACTGGCCGGTACCGGCCTCGTCGCGACGGGGCTTTCGGGCGTTGCGGGTCCGGC
CGCGCTGGGGCAGGCCGCGTGTGCATCCCGGCCGTCGGTGCCGGCGTGGGCCAAGGGTTTCGATGGCCAGCGTATCGCCG
ACCTTGGCGACGGGCGCTTCCTCAATCCGATCATGGCGGGCGATCATCCCGACCCGTCGATCCTGAAGGACGGCGCCGAT
TATTATATGACCTTTTCGACCTTCGACAGCTATCCGGGGCTGGTCATCTGGCATTCGCGCGATCTGGTGAACTGGCGCCC
GGTCGGGCCCGCGCTGCACCGGAATATCGGGTCGGTCTGGGCACCCGAACTCTGCAAGCATGGCGGGCGCTTCTATCTCT
ACATTCCCACGAAAGGGCCGAACACGAGCTGGGTGATCTGGGCCGACCGGATCGAGGGACCGTGGAGCGATCCGGTCGAC
CTGAACCTGCCCAACCACATCGACCCCGGCCATGCGGTCGGCGAGGACGGGTCGCGCTGGCTGTTCCTGTCGGGCGGCGA
CCGCGTGCGGCTGTCGGACGATGGGTGCAAGCGCATCGGCGAACCCGAACATGTCTATGACCCGTGGCGCTATCCATCCG
ACTGGGTGGTCGAAGGCTTCGCGCCCGAAGGGCCAAAGATCACGCGGCATGGCGACTATTATTATATGATCACCGCGGTC
GGCGGCACCGCAGGCCCGCCGACCGGCCATATGGTGATCGCCGCGCGCTCGACATCGATCGACGGGCCGTGGGAAAATTG
CCCGGCGAACCCGCTCGTCCGCACGGTGTCGGCCGCCGAAAAATGGTGGTCGCGCGGCCATGCGACGCTTGTCGAGGGGC
CTGCGGGCGACTGGTGGGCGGTCTATCACGGCTATGAGAATGGCTTTTGGACCCTGGGGCGGCAGGCCTTGCTCGACCCC
GTCGAATGGACCGACGATGGCTGGTTGCGCATGACGGGCGGCGATTTGTCGCAGCCGATCGCCAAGCCGAAAGGCGGCAG
CGTCGCGGGGCCGCATGGTATGGCGCTGTCGGACGATTTTTCGTCGCTCGCGCTCGGCGCCAAGTGGAACTTCTTCAAGC
CCGCGTCGGACGAACACCGTCGCGCGCGTGTCGAGGACGGCGCGCTGGTGCTGACGGCGCGCGGGGAGGCACCGGTCGAT
TCATCGCCGCTGCTGCTGATCGCGGGCGACCATGCGTATCGTTTCGAATGCGATATCGAGATCGCGCCCGGCGGCACCGC
GGGGCTGATCCTTTTCTATGACGAGAAACTCTATTGCGGACTCGGCTTTGACCGCGATCGCTTCGTGACGCATCAATATG
GCATCGAACGCGCGCGGCCGGTCAATCCGCACGGGACACGGATGCGGATGCGCGTCACCAACGACCGGCATATCGTGACT
TATGACACCAGCGGCGACGGCGGACGGACCTGGGTGCGCTTCGACCGGGGGATGGAGGTGTCGGGATACCACCATAATGT
GCGCGGCGGCTTCCTGATGCTGCGCCCCGGCCTCTATTCGGCGGGCGCCGGCGAGGCGCGCTTTCGCAATTTCACCTTCC
GCGCGCTCGATTAA

Upstream 100 bases:

>100_bases
TGCGCGCGTCAAGATCTGACGCCGAAGATCGATCCTGGAGAGGGCCCGGCCTGCGGTTGCGGGGGCCGGGCCTTTTCTTT
CATGAAAGAGGGAAAGGCCG

Downstream 100 bases:

>100_bases
AGCGTCACGCCCGATTTCCAGATCGCGATGTCGCGCTCCTCATTTGCTTCGGCTTTGGTCGGGGCGCCCGAAGCGGTGGC
GGCGATCAGGTCGAGCAGGG

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: 1,4-beta-D-xylan xylohydrolase; Xylan 1,4-beta-xylosidase [H]

Number of amino acids: Translated: 537; Mature: 536

Protein sequence:

>537_residues
MTDRRDLLKLAGTGLVATGLSGVAGPAALGQAACASRPSVPAWAKGFDGQRIADLGDGRFLNPIMAGDHPDPSILKDGAD
YYMTFSTFDSYPGLVIWHSRDLVNWRPVGPALHRNIGSVWAPELCKHGGRFYLYIPTKGPNTSWVIWADRIEGPWSDPVD
LNLPNHIDPGHAVGEDGSRWLFLSGGDRVRLSDDGCKRIGEPEHVYDPWRYPSDWVVEGFAPEGPKITRHGDYYYMITAV
GGTAGPPTGHMVIAARSTSIDGPWENCPANPLVRTVSAAEKWWSRGHATLVEGPAGDWWAVYHGYENGFWTLGRQALLDP
VEWTDDGWLRMTGGDLSQPIAKPKGGSVAGPHGMALSDDFSSLALGAKWNFFKPASDEHRRARVEDGALVLTARGEAPVD
SSPLLLIAGDHAYRFECDIEIAPGGTAGLILFYDEKLYCGLGFDRDRFVTHQYGIERARPVNPHGTRMRMRVTNDRHIVT
YDTSGDGGRTWVRFDRGMEVSGYHHNVRGGFLMLRPGLYSAGAGEARFRNFTFRALD

Sequences:

>Translated_537_residues
MTDRRDLLKLAGTGLVATGLSGVAGPAALGQAACASRPSVPAWAKGFDGQRIADLGDGRFLNPIMAGDHPDPSILKDGAD
YYMTFSTFDSYPGLVIWHSRDLVNWRPVGPALHRNIGSVWAPELCKHGGRFYLYIPTKGPNTSWVIWADRIEGPWSDPVD
LNLPNHIDPGHAVGEDGSRWLFLSGGDRVRLSDDGCKRIGEPEHVYDPWRYPSDWVVEGFAPEGPKITRHGDYYYMITAV
GGTAGPPTGHMVIAARSTSIDGPWENCPANPLVRTVSAAEKWWSRGHATLVEGPAGDWWAVYHGYENGFWTLGRQALLDP
VEWTDDGWLRMTGGDLSQPIAKPKGGSVAGPHGMALSDDFSSLALGAKWNFFKPASDEHRRARVEDGALVLTARGEAPVD
SSPLLLIAGDHAYRFECDIEIAPGGTAGLILFYDEKLYCGLGFDRDRFVTHQYGIERARPVNPHGTRMRMRVTNDRHIVT
YDTSGDGGRTWVRFDRGMEVSGYHHNVRGGFLMLRPGLYSAGAGEARFRNFTFRALD
>Mature_536_residues
TDRRDLLKLAGTGLVATGLSGVAGPAALGQAACASRPSVPAWAKGFDGQRIADLGDGRFLNPIMAGDHPDPSILKDGADY
YMTFSTFDSYPGLVIWHSRDLVNWRPVGPALHRNIGSVWAPELCKHGGRFYLYIPTKGPNTSWVIWADRIEGPWSDPVDL
NLPNHIDPGHAVGEDGSRWLFLSGGDRVRLSDDGCKRIGEPEHVYDPWRYPSDWVVEGFAPEGPKITRHGDYYYMITAVG
GTAGPPTGHMVIAARSTSIDGPWENCPANPLVRTVSAAEKWWSRGHATLVEGPAGDWWAVYHGYENGFWTLGRQALLDPV
EWTDDGWLRMTGGDLSQPIAKPKGGSVAGPHGMALSDDFSSLALGAKWNFFKPASDEHRRARVEDGALVLTARGEAPVDS
SPLLLIAGDHAYRFECDIEIAPGGTAGLILFYDEKLYCGLGFDRDRFVTHQYGIERARPVNPHGTRMRMRVTNDRHIVTY
DTSGDGGRTWVRFDRGMEVSGYHHNVRGGFLMLRPGLYSAGAGEARFRNFTFRALD

Specific function: Unknown

COG id: COG3507

COG function: function code G; Beta-xylosidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 43 family [H]

Homologues:

Organism=Escherichia coli, GI1786467, Length=509, Percent_Identity=26.5225933202358, Blast_Score=129, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008985
- InterPro:   IPR013320
- InterPro:   IPR009784
- InterPro:   IPR006710 [H]

Pfam domain/function: PF07081 DUF1349; PF04616 Glyco_hydro_43 [H]

EC number: =3.2.1.37 [H]

Molecular weight: Translated: 59016; Mature: 58885

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDRRDLLKLAGTGLVATGLSGVAGPAALGQAACASRPSVPAWAKGFDGQRIADLGDGRF
CCCHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCCEEEECCCCCE
LNPIMAGDHPDPSILKDGADYYMTFSTFDSYPGLVIWHSRDLVNWRPVGPALHRNIGSVW
ECHHHCCCCCCHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCCEECCCHHHHHCCCCCC
APELCKHGGRFYLYIPTKGPNTSWVIWADRIEGPWSDPVDLNLPNHIDPGHAVGEDGSRW
CHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCEE
LFLSGGDRVRLSDDGCKRIGEPEHVYDPWRYPSDWVVEGFAPEGPKITRHGDYYYMITAV
EEEECCCEEEECCCHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCEEEECCCEEEEEEEE
GGTAGPPTGHMVIAARSTSIDGPWENCPANPLVRTVSAAEKWWSRGHATLVEGPAGDWWA
CCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCEEE
VYHGYENGFWTLGRQALLDPVEWTDDGWLRMTGGDLSQPIAKPKGGSVAGPHGMALSDDF
EEECCCCCEEECCHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCH
SSLALGAKWNFFKPASDEHRRARVEDGALVLTARGEAPVDSSPLLLIAGDHAYRFECDIE
HHEEECCCCCCCCCCCCHHHHEECCCCEEEEEECCCCCCCCCCEEEEECCCEEEEEEEEE
IAPGGTAGLILFYDEKLYCGLGFDRDRFVTHQYGIERARPVNPHGTRMRMRVTNDRHIVT
ECCCCCEEEEEEECCEEEEECCCCCCEEEHHHHCCCCCCCCCCCCCEEEEEECCCCEEEE
YDTSGDGGRTWVRFDRGMEVSGYHHNVRGGFLMLRPGLYSAGAGEARFRNFTFRALD
EECCCCCCEEEEEECCCCEECCEEEECCCCEEEECCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure 
TDRRDLLKLAGTGLVATGLSGVAGPAALGQAACASRPSVPAWAKGFDGQRIADLGDGRF
CCHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCCEEEECCCCCE
LNPIMAGDHPDPSILKDGADYYMTFSTFDSYPGLVIWHSRDLVNWRPVGPALHRNIGSVW
ECHHHCCCCCCHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCCEECCCHHHHHCCCCCC
APELCKHGGRFYLYIPTKGPNTSWVIWADRIEGPWSDPVDLNLPNHIDPGHAVGEDGSRW
CHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCEE
LFLSGGDRVRLSDDGCKRIGEPEHVYDPWRYPSDWVVEGFAPEGPKITRHGDYYYMITAV
EEEECCCEEEECCCHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCEEEECCCEEEEEEEE
GGTAGPPTGHMVIAARSTSIDGPWENCPANPLVRTVSAAEKWWSRGHATLVEGPAGDWWA
CCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCEEE
VYHGYENGFWTLGRQALLDPVEWTDDGWLRMTGGDLSQPIAKPKGGSVAGPHGMALSDDF
EEECCCCCEEECCHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCH
SSLALGAKWNFFKPASDEHRRARVEDGALVLTARGEAPVDSSPLLLIAGDHAYRFECDIE
HHEEECCCCCCCCCCCCHHHHEECCCCEEEEEECCCCCCCCCCEEEEECCCEEEEEEEEE
IAPGGTAGLILFYDEKLYCGLGFDRDRFVTHQYGIERARPVNPHGTRMRMRVTNDRHIVT
ECCCCCEEEEEEECCEEEEECCCCCCEEEHHHHCCCCCCCCCCCCCEEEEEECCCCEEEE
YDTSGDGGRTWVRFDRGMEVSGYHHNVRGGFLMLRPGLYSAGAGEARFRNFTFRALD
EECCCCCCEEEEEECCCCEECCEEEECCCCEEEECCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]