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The map label for this gene is cirA [C]

Identifier: 103488517

GI number: 103488517

Start: 3188443

End: 3191238

Strand: Direct

Name: cirA [C]

Synonym: Sala_3041

Alternate gene names: 103488517

Gene position: 3188443-3191238 (Clockwise)

Preceding gene: 103488513

Following gene: 103488518

Centisome position: 95.31

GC content: 60.26

Gene sequence:

>2796_bases
ATGTCAATTCAAGCAATGCGGAGCGTTCGCACTTTGACCCGGCTGGCGTGCGGGGCCTCGCTTGCCGTGCTGGCGGCGTC
GCCGGTGTGGGCGCAGGATGCTGCTGAAGAGGCGGTCGCCAGCGAAGACGAGATCGTCGTCACCGGCTTTCGCGCCTCGC
TCGACGAAGCACTCAACCAGAAACGCGATTCGATCTCGGCTGTCGACGTCATCGTGGCGGAGGACATTGCGAAATTCCCG
GATCAGAATCTGGCTGAATCGCTGCAACGCATTCCCGGCATCTCCATCCAGCGCGACGCTGGCGAAGGCCGCGCGATCAC
GGTTCGCGGGCTTGGCGCACAGTTCACGCGCGTTCGCCTGAACGGCATGGAAACCATCGCGACGTCGACCGACGGCGCCG
CGGCGAACCGCGACCGCGCGTTCGATTTCAACGTCTTTGCCTCCGAACTCTTCACCTCGCTGGTGGTCCATAAGACCGCC
TCGGCCTCGCTCGACGAAGGCTCGCTGGGGGCAGTGGTCGATCTCAACACCGGCAATCCGCTGGGCGGCAAGGAAGGGCT
GACGCTCGTTGGCTCGGCGCAGGCGCGTTACAACGACCTCACCGAAAATGTCGATCCGCGGCTGGCAGGCCTGATCGCCT
GGACCGACGCCGATCGCACCTTCGGCGTTTCGGCGTCGGTCGCCTGGTCCGATTATACGACGGACGAACTGGGCAATAAC
AGCGTTCGCTGGGCGCAGGCGCCGTTCCGCAGTGTAGATGGTGTAACTTGCCTTTCGGGCTCCAGTTTCGTCGCAAATCC
CTCGGCCGGCTGTATCGAGGTTGCCGAAGCGTTCCACCCGCGCATCCCGCGTTACGGCCTGGTGCGGCATGAACGCGAAC
GGCTGGGTGCGACCGCCTCGATCCAGTTCGAGCCAAGCGAGAATACGAAGATTTCGATCGACGGGCTATATTCGCGGTTC
AAGGAAGTGCGCGACGAATATTGGGGCGAAGTGCTGTTGCGCAGCGAAGAGCGCGGCATCGATGTGTCCAACTACACGAT
CGATGAAGACAACAATCTGATCGCGGCGGATCTCGATAATGTGTACATCCGCACCGAACGCTATTCGCGTGAGAGCGAGA
CCGAATTCTACCAATTGTCGGGGCGCCTGGAACAGCGGCTGACCGACACGTTCAAGATCAATCTGCTTGGCGGTTTTTCG
AAGTCGCAGGCCGATATCCCGATCGAAACGACGCTGGCGTTCGACGACCGGGACGGCACCGGGTATCGCTATGATTATAC
GAACATGAAGTTCCCGGTTCTCAGCTTCGGTCCGGGCATCGAGGATCCTTCGTCGTTCGTGCTCGCCGAATTCCGCGATC
GCCCGTCGTTCCTGACCAACAAGTTCAAGACGGTGTCGCTCGATTTCGACTGGGACGTGGCCGACCGGTTCAAGCTGCTT
GGCGGCGGTTTCTATCGTCAGTTCGATTTCGATACGGTCGGCTTCCGCCGCGACAGCACCTATTGTGCCGCCTTCACCTG
CGCGCCCGGTACCACCGGCCTGCCGGTAACGGCTGACATTGCCGAACTGTTCAAGCTGGGCAAAGCGGGGCAGCCATCGG
GCAATACCAACGCCTGGATCGTGCCAGATCTCGATGCGGGGACGGCGCTGATCGACCTCTACAACCGTCCGGCCGTCCTT
CAGCAAGGTGAACAGCGCGCAGTCACCGAAAAAACCTATGGCGGCTGGTTTATGACCGAGTTCGAAACCGAACTCGCCGG
GATGCGGCTGACCGGTAATGCCGGCGTGCGCTATGCCAAAACCGAGCAATCGTCTTCGGGTTTCACAAGCGGAACATTCG
TTACGGTCGACCGGACCTATGACGACTGGTTGCCGTCGTTCAACCTGAACCTGCATCCGACCGAGAACATCATTCTGCGC
GGGGCGATCGCGAAGGTGATCACGCGCCCCACGCTCGGCAATCTGTCGCCGGGCGGTGCCGTCGATCAGTTTAATTTCCG
GATCACCTCGGGTAACCCGTTCCTCGATCCGTTCCGCGCGACGACTTTCGATCTGGCCGCCGAATGGTATTTCGCACCGG
GAGCACTCGCTTCGGTGGCTTTGTTCGCCAAGGATATCGAAAGCTTCCCCATTTCTACTTCACTTCAGGGGACATATGCC
GACAGCGGCCTGCCGCTCTCGCTTCTGACGCCGGGAACCCCGGCTTATGATGCTGTCGTGGGCGGTTCGAACCCCAACCG
GCAGTTCGAGTTCCGTACGACCGGAAACGGCCCCGGCGCGAGCCTCAAGGGCATGGAATTGTCGCTCCAGCTACCATTCT
CTGTGTTCTCGGACTCGTTGCGTCACTTTGGCGTGCTCGGCAATGCGACGTTCGTAAAAAGCAATGTCGACTACACGATT
GCCGGGCCCTTGGCATATGATCCTGTCGATAACCGGCTCGAGGCACAGCCAGCGGGCGTCTATACCCAGCCGCTGCTCAA
CCTTGCCAAGCGGGCGTGGAATGCCACCGTCTATTACGACGACGGCAAATTCTCGGCGCGTACGTCGGCGGCATGGCGCA
GCGGCTATAATGACGGCACCAGCGGCAACGGCAATGTGTTCGAAGGTTATGGCAGTTCGTTCAACGTCGATGCGTCGATC
CGTTATGCGATCACCGAAAATATCGAACTGTCGATCGAGGGGACGAACCTTACGGACGATTATCGCTATCGCTTCACCGA
CCTCGAAGCGAATCGCAACTATGAGAACAACCACTACGGCCGCACCTTCCTGTTCGGTGCGCGCGTCAAGATCTGA

Upstream 100 bases:

>100_bases
TCGATGGACAGCATGGCGCTCCGCGCCATTGTGTCGAGTAAAGTAACCGGTGTCATTTCTTGCGCGAGCGAGGATGCGGG
GCGATTAAGGGAGGATGGAA

Downstream 100 bases:

>100_bases
CGCCGAAGATCGATCCTGGAGAGGGCCCGGCCTGCGGTTGCGGGGGCCGGGCCTTTTCTTTCATGAAAGAGGGAAAGGCC
GATGACCGACCGCCGCGATT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: Nb-Dependent Receptor; NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Nb-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor Subfamily; Outer Membrane Protein; NB-Dependent Receptor Subfamily Protein; NB-Dependent Outer Membrane Receptor Protein; NB Dependent Receptor-Related Protein; NB-Dependent Receptor-Like Protein; Outer Membrane Insertion C-Terminal Signal; Nucleoside Diphosphate Kinase; NB-Dependent Maltose Outer Membrane Transporter MalA; NB Dependent Receptor For Iron Chelates; 50S Ribosomal Protein L; NB-Dependent Outer Membrane Ferripyoverdine Receptor; 3-Dehydroquinate Synthase; NB Dependent Receptor Protein; Argininosuccinate Synthase

Number of amino acids: Translated: 931; Mature: 930

Protein sequence:

>931_residues
MSIQAMRSVRTLTRLACGASLAVLAASPVWAQDAAEEAVASEDEIVVTGFRASLDEALNQKRDSISAVDVIVAEDIAKFP
DQNLAESLQRIPGISIQRDAGEGRAITVRGLGAQFTRVRLNGMETIATSTDGAAANRDRAFDFNVFASELFTSLVVHKTA
SASLDEGSLGAVVDLNTGNPLGGKEGLTLVGSAQARYNDLTENVDPRLAGLIAWTDADRTFGVSASVAWSDYTTDELGNN
SVRWAQAPFRSVDGVTCLSGSSFVANPSAGCIEVAEAFHPRIPRYGLVRHERERLGATASIQFEPSENTKISIDGLYSRF
KEVRDEYWGEVLLRSEERGIDVSNYTIDEDNNLIAADLDNVYIRTERYSRESETEFYQLSGRLEQRLTDTFKINLLGGFS
KSQADIPIETTLAFDDRDGTGYRYDYTNMKFPVLSFGPGIEDPSSFVLAEFRDRPSFLTNKFKTVSLDFDWDVADRFKLL
GGGFYRQFDFDTVGFRRDSTYCAAFTCAPGTTGLPVTADIAELFKLGKAGQPSGNTNAWIVPDLDAGTALIDLYNRPAVL
QQGEQRAVTEKTYGGWFMTEFETELAGMRLTGNAGVRYAKTEQSSSGFTSGTFVTVDRTYDDWLPSFNLNLHPTENIILR
GAIAKVITRPTLGNLSPGGAVDQFNFRITSGNPFLDPFRATTFDLAAEWYFAPGALASVALFAKDIESFPISTSLQGTYA
DSGLPLSLLTPGTPAYDAVVGGSNPNRQFEFRTTGNGPGASLKGMELSLQLPFSVFSDSLRHFGVLGNATFVKSNVDYTI
AGPLAYDPVDNRLEAQPAGVYTQPLLNLAKRAWNATVYYDDGKFSARTSAAWRSGYNDGTSGNGNVFEGYGSSFNVDASI
RYAITENIELSIEGTNLTDDYRYRFTDLEANRNYENNHYGRTFLFGARVKI

Sequences:

>Translated_931_residues
MSIQAMRSVRTLTRLACGASLAVLAASPVWAQDAAEEAVASEDEIVVTGFRASLDEALNQKRDSISAVDVIVAEDIAKFP
DQNLAESLQRIPGISIQRDAGEGRAITVRGLGAQFTRVRLNGMETIATSTDGAAANRDRAFDFNVFASELFTSLVVHKTA
SASLDEGSLGAVVDLNTGNPLGGKEGLTLVGSAQARYNDLTENVDPRLAGLIAWTDADRTFGVSASVAWSDYTTDELGNN
SVRWAQAPFRSVDGVTCLSGSSFVANPSAGCIEVAEAFHPRIPRYGLVRHERERLGATASIQFEPSENTKISIDGLYSRF
KEVRDEYWGEVLLRSEERGIDVSNYTIDEDNNLIAADLDNVYIRTERYSRESETEFYQLSGRLEQRLTDTFKINLLGGFS
KSQADIPIETTLAFDDRDGTGYRYDYTNMKFPVLSFGPGIEDPSSFVLAEFRDRPSFLTNKFKTVSLDFDWDVADRFKLL
GGGFYRQFDFDTVGFRRDSTYCAAFTCAPGTTGLPVTADIAELFKLGKAGQPSGNTNAWIVPDLDAGTALIDLYNRPAVL
QQGEQRAVTEKTYGGWFMTEFETELAGMRLTGNAGVRYAKTEQSSSGFTSGTFVTVDRTYDDWLPSFNLNLHPTENIILR
GAIAKVITRPTLGNLSPGGAVDQFNFRITSGNPFLDPFRATTFDLAAEWYFAPGALASVALFAKDIESFPISTSLQGTYA
DSGLPLSLLTPGTPAYDAVVGGSNPNRQFEFRTTGNGPGASLKGMELSLQLPFSVFSDSLRHFGVLGNATFVKSNVDYTI
AGPLAYDPVDNRLEAQPAGVYTQPLLNLAKRAWNATVYYDDGKFSARTSAAWRSGYNDGTSGNGNVFEGYGSSFNVDASI
RYAITENIELSIEGTNLTDDYRYRFTDLEANRNYENNHYGRTFLFGARVKI
>Mature_930_residues
SIQAMRSVRTLTRLACGASLAVLAASPVWAQDAAEEAVASEDEIVVTGFRASLDEALNQKRDSISAVDVIVAEDIAKFPD
QNLAESLQRIPGISIQRDAGEGRAITVRGLGAQFTRVRLNGMETIATSTDGAAANRDRAFDFNVFASELFTSLVVHKTAS
ASLDEGSLGAVVDLNTGNPLGGKEGLTLVGSAQARYNDLTENVDPRLAGLIAWTDADRTFGVSASVAWSDYTTDELGNNS
VRWAQAPFRSVDGVTCLSGSSFVANPSAGCIEVAEAFHPRIPRYGLVRHERERLGATASIQFEPSENTKISIDGLYSRFK
EVRDEYWGEVLLRSEERGIDVSNYTIDEDNNLIAADLDNVYIRTERYSRESETEFYQLSGRLEQRLTDTFKINLLGGFSK
SQADIPIETTLAFDDRDGTGYRYDYTNMKFPVLSFGPGIEDPSSFVLAEFRDRPSFLTNKFKTVSLDFDWDVADRFKLLG
GGFYRQFDFDTVGFRRDSTYCAAFTCAPGTTGLPVTADIAELFKLGKAGQPSGNTNAWIVPDLDAGTALIDLYNRPAVLQ
QGEQRAVTEKTYGGWFMTEFETELAGMRLTGNAGVRYAKTEQSSSGFTSGTFVTVDRTYDDWLPSFNLNLHPTENIILRG
AIAKVITRPTLGNLSPGGAVDQFNFRITSGNPFLDPFRATTFDLAAEWYFAPGALASVALFAKDIESFPISTSLQGTYAD
SGLPLSLLTPGTPAYDAVVGGSNPNRQFEFRTTGNGPGASLKGMELSLQLPFSVFSDSLRHFGVLGNATFVKSNVDYTIA
GPLAYDPVDNRLEAQPAGVYTQPLLNLAKRAWNATVYYDDGKFSARTSAAWRSGYNDGTSGNGNVFEGYGSSFNVDASIR
YAITENIELSIEGTNLTDDYRYRFTDLEANRNYENNHYGRTFLFGARVKI

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 101773; Mature: 101642

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQAMRSVRTLTRLACGASLAVLAASPVWAQDAAEEAVASEDEIVVTGFRASLDEALNQ
CCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHH
KRDSISAVDVIVAEDIAKFPDQNLAESLQRIPGISIQRDAGEGRAITVRGLGAQFTRVRL
HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCEEEEEEE
NGMETIATSTDGAAANRDRAFDFNVFASELFTSLVVHKTASASLDEGSLGAVVDLNTGNP
CCCEEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCC
LGGKEGLTLVGSAQARYNDLTENVDPRLAGLIAWTDADRTFGVSASVAWSDYTTDELGNN
CCCCCCEEEEECCCHHHHHHHCCCCCCEEEEEEEECCCCEECCEEEEEECCCCHHHCCCC
SVRWAQAPFRSVDGVTCLSGSSFVANPSAGCIEVAEAFHPRIPRYGLVRHERERLGATAS
CEEEECCCCCCCCCEEEECCCCEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCEEE
IQFEPSENTKISIDGLYSRFKEVRDEYWGEVLLRSEERGIDVSNYTIDEDNNLIAADLDN
EEECCCCCCEEEEHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEECCCCCEEEEECCC
VYIRTERYSRESETEFYQLSGRLEQRLTDTFKINLLGGFSKSQADIPIETTLAFDDRDGT
EEEEEHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCC
GYRYDYTNMKFPVLSFGPGIEDPSSFVLAEFRDRPSFLTNKFKTVSLDFDWDVADRFKLL
CEEEECCCCEEEEEECCCCCCCCCHHHHEECCCCCCHHHCCEEEEEEECCCCHHHHHHHH
GGGFYRQFDFDTVGFRRDSTYCAAFTCAPGTTGLPVTADIAELFKLGKAGQPSGNTNAWI
CCCEEEEECCCCCCEECCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEE
VPDLDAGTALIDLYNRPAVLQQGEQRAVTEKTYGGWFMTEFETELAGMRLTGNAGVRYAK
EECCCCCCEEEEECCCCHHHHCCCHHHHHHHCCCCEEEEEEHHHHCCEEEECCCCEEEEE
TEQSSSGFTSGTFVTVDRTYDDWLPSFNLNLHPTENIILRGAIAKVITRPTLGNLSPGGA
CCCCCCCCCCCEEEEEECCHHHCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCC
VDQFNFRITSGNPFLDPFRATTFDLAAEWYFAPGALASVALFAKDIESFPISTSLQGTYA
CEEEEEEEECCCCCCCCHHCCEEHHEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCEEC
DSGLPLSLLTPGTPAYDAVVGGSNPNRQFEFRTTGNGPGASLKGMELSLQLPFSVFSDSL
CCCCCEEEECCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEECCHHHHHHHH
RHFGVLGNATFVKSNVDYTIAGPLAYDPVDNRLEAQPAGVYTQPLLNLAKRAWNATVYYD
HHCEEECCCEEEECCCCEEEECCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEE
DGKFSARTSAAWRSGYNDGTSGNGNVFEGYGSSFNVDASIRYAITENIELSIEGTNLTDD
CCCCCCCCHHHHHCCCCCCCCCCCCEEECCCCCEEECCEEEEEEECCEEEEEECCCCCCC
YRYRFTDLEANRNYENNHYGRTFLFGARVKI
CEEEEEEEECCCCCCCCCCCEEEEEEEEEEC
>Mature Secondary Structure 
SIQAMRSVRTLTRLACGASLAVLAASPVWAQDAAEEAVASEDEIVVTGFRASLDEALNQ
CHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHH
KRDSISAVDVIVAEDIAKFPDQNLAESLQRIPGISIQRDAGEGRAITVRGLGAQFTRVRL
HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCEEEEEEE
NGMETIATSTDGAAANRDRAFDFNVFASELFTSLVVHKTASASLDEGSLGAVVDLNTGNP
CCCEEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCC
LGGKEGLTLVGSAQARYNDLTENVDPRLAGLIAWTDADRTFGVSASVAWSDYTTDELGNN
CCCCCCEEEEECCCHHHHHHHCCCCCCEEEEEEEECCCCEECCEEEEEECCCCHHHCCCC
SVRWAQAPFRSVDGVTCLSGSSFVANPSAGCIEVAEAFHPRIPRYGLVRHERERLGATAS
CEEEECCCCCCCCCEEEECCCCEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCEEE
IQFEPSENTKISIDGLYSRFKEVRDEYWGEVLLRSEERGIDVSNYTIDEDNNLIAADLDN
EEECCCCCCEEEEHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEECCCCCEEEEECCC
VYIRTERYSRESETEFYQLSGRLEQRLTDTFKINLLGGFSKSQADIPIETTLAFDDRDGT
EEEEEHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCC
GYRYDYTNMKFPVLSFGPGIEDPSSFVLAEFRDRPSFLTNKFKTVSLDFDWDVADRFKLL
CEEEECCCCEEEEEECCCCCCCCCHHHHEECCCCCCHHHCCEEEEEEECCCCHHHHHHHH
GGGFYRQFDFDTVGFRRDSTYCAAFTCAPGTTGLPVTADIAELFKLGKAGQPSGNTNAWI
CCCEEEEECCCCCCEECCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEE
VPDLDAGTALIDLYNRPAVLQQGEQRAVTEKTYGGWFMTEFETELAGMRLTGNAGVRYAK
EECCCCCCEEEEECCCCHHHHCCCHHHHHHHCCCCEEEEEEHHHHCCEEEECCCCEEEEE
TEQSSSGFTSGTFVTVDRTYDDWLPSFNLNLHPTENIILRGAIAKVITRPTLGNLSPGGA
CCCCCCCCCCCEEEEEECCHHHCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCC
VDQFNFRITSGNPFLDPFRATTFDLAAEWYFAPGALASVALFAKDIESFPISTSLQGTYA
CEEEEEEEECCCCCCCCHHCCEEHHEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCEEC
DSGLPLSLLTPGTPAYDAVVGGSNPNRQFEFRTTGNGPGASLKGMELSLQLPFSVFSDSL
CCCCCEEEECCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEECCHHHHHHHH
RHFGVLGNATFVKSNVDYTIAGPLAYDPVDNRLEAQPAGVYTQPLLNLAKRAWNATVYYD
HHCEEECCCEEEECCCCEEEECCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEE
DGKFSARTSAAWRSGYNDGTSGNGNVFEGYGSSFNVDASIRYAITENIELSIEGTNLTDD
CCCCCCCCHHHHHCCCCCCCCCCCCEEECCCCCEEECCEEEEEEECCEEEEEECCCCCCC
YRYRFTDLEANRNYENNHYGRTFLFGARVKI
CEEEEEEEECCCCCCCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA