| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488485
Identifier: 103488485
GI number: 103488485
Start: 3149664
End: 3149927
Strand: Reverse
Name: 103488485
Synonym: Sala_3008
Alternate gene names: NA
Gene position: 3149927-3149664 (Counterclockwise)
Preceding gene: 103488487
Following gene: 103488484
Centisome position: 94.16
GC content: 71.59
Gene sequence:
>264_bases GTGCTTGAGGACGACGCGGCACTGGCGCTCCATGCGCTCGGCTGGATTTTGAGCGACGAGCCGCGCGCCGGGCGATTGCT CGCGCTCACCGGCCTTGCGCCGGGCGAACTGCGCGCCTCGCTCGGCGAGCGCGCGACGCTCGCGGCGATCCTGTCGTTCC TCACCGCCCATGAAAACGACCTTGTCGCCTGCGCCGATGCGTTGCAGGTGCCCCCCGCCGGCCTCGCCGCCGCGGCCCTC AGACTCGAAGGATCCCCTGCATGA
Upstream 100 bases:
>100_bases TGGTCTTGCCCATGTGCGTTCCGTTCCCCACCTTGCGTGCGCGGCCCGTTTAGGCGAATCGGGCGCATGACACAATTGCA TCGCGGCGAAGGGGTCTGAC
Downstream 100 bases:
>100_bases CCCGCCCGCTCGTCATCACCGATTGCGACGAGGTGCTGATGCACATGGTCGTGCCCTTCGCCGAATGGGTCGACGCCGAA CATGGCGTGATCTTTCGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MLEDDAALALHALGWILSDEPRAGRLLALTGLAPGELRASLGERATLAAILSFLTAHENDLVACADALQVPPAGLAAAAL RLEGSPA
Sequences:
>Translated_87_residues MLEDDAALALHALGWILSDEPRAGRLLALTGLAPGELRASLGERATLAAILSFLTAHENDLVACADALQVPPAGLAAAAL RLEGSPA >Mature_87_residues MLEDDAALALHALGWILSDEPRAGRLLALTGLAPGELRASLGERATLAAILSFLTAHENDLVACADALQVPPAGLAAAAL RLEGSPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8837; Mature: 8837
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEDDAALALHALGWILSDEPRAGRLLALTGLAPGELRASLGERATLAAILSFLTAHEND CCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHCCCCC LVACADALQVPPAGLAAAALRLEGSPA EEEHHHHHCCCCCCHHHHHEECCCCCC >Mature Secondary Structure MLEDDAALALHALGWILSDEPRAGRLLALTGLAPGELRASLGERATLAAILSFLTAHEND CCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHCCCCC LVACADALQVPPAGLAAAALRLEGSPA EEEHHHHHCCCCCCHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA