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The map label for this gene is yngJ [H]

Identifier: 103488487

GI number: 103488487

Start: 3150547

End: 3151710

Strand: Reverse

Name: yngJ [H]

Synonym: Sala_3010

Alternate gene names: 103488487

Gene position: 3151710-3150547 (Counterclockwise)

Preceding gene: 103488488

Following gene: 103488485

Centisome position: 94.22

GC content: 63.4

Gene sequence:

>1164_bases
ATGACCAACGCAGGCATGGACGCCGACATCTACGGCGCCTTTATCGAGCAGCTGCAACGCTATGTCCGCGAACGGCTGAT
CCCCGCCGAGGACCAGCTCGAAGAACTCGGCCGCGTTCCCGACGATATCCTCGCCGAAATGCGCGACATGGGGCTGTTCG
GCGTGACGATGCCCGAAGAATATGGCGGCGCGGGCATGAACATCAGCCAATATGTCGGCTTCATTCGCGAGCTCGCCTAT
GCCGCGCCCGCCTATCGCTCGATCGTGTCGATCAACATCGGCATGGTGTGCAAATCGATCCTCGGGTTCGGCACCGAGCA
GCAGAAAGCGCATTGGCTGCCCAAGCTGGCGAGCGGCAGCATCGCCGCCTTCGGCCTCACCGAGCCCGACAGCGGCTCGG
ACAGCGCGGCGATGAAGACGCGCGCGGTGCCGAGCGGCAACGGCTATGTGCTCAATGGCACCAAACGCTATATCACCAAC
GCGCCCTTTGCCGACGTCATCCTCGTCATGGCGCGCACCAATGCCGAGGCGCTGCCAAAGAATGCGCATGTCAGCGCTTT
CCTCGTGCCCAGAGACGCCCCCGGCGTCTCGATCGGCAAGCCCGACGGCAAGATGGGCCAGGCCGGATCGCAGATCGCCG
ACGTGATCCTCGAGGATGTGCATGTCGACGGCGACGCGCTGCTCGGCGGCGAGGAAGGCATCGGCTTTCGCGCCGCGATG
CAGAGCCTCGACAACGGGCGCCTGTCGGTCGCCGCGGCGAGCGTCGGCTATGCCAAAAGGATGCTCGACACGGGGCTTCG
ATATGCGATGGAACGCAAGGCGTTCGGCGAACCCATCGCCAGTTTCCAGCTGATCCAGGCGATGCTCGCCGACAGCAAGG
CCGAAATCTACGCCGCCGACTGCATGCTCAACGACGCCTGCGCGCGCGCCGACCGCGGCGAAAAGATCCTTGTCGAAGCC
GCCGCGACCAAGATGTTCGCGAGTGAAATGTGCGGCCGCGTCGCCGACCGCGTGGTGCAGATTCATGGCGGCGCGGGCTA
TCTCAAGGAATATCTCGCCGAACGCTTCTATCGCGACTGTCGCATTTACCGCATTTATGAAGGGACGACGCAGATACAGC
AGCTGGTGATCGCGAAGAACATGATCCGCGATTATGCGGGCTAG

Upstream 100 bases:

>100_bases
TCTGGCGCCCCGACATCGATATCGACGAGCGCGAACAATTGACGCGCATCTTCGCGGCGATCGACACCTATGGCGAACAA
TAGACAGGAACGGGAAGACG

Downstream 100 bases:

>100_bases
CTGTTTAGAGCGCGATGGCATGTGATGGTGTAGCGTCCTATTGAAGATATCCGGCTTGGATTTCCAGAGTTCTTCGATGG
CTTCACAGGGCGTCCTGAAG

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MTNAGMDADIYGAFIEQLQRYVRERLIPAEDQLEELGRVPDDILAEMRDMGLFGVTMPEEYGGAGMNISQYVGFIRELAY
AAPAYRSIVSINIGMVCKSILGFGTEQQKAHWLPKLASGSIAAFGLTEPDSGSDSAAMKTRAVPSGNGYVLNGTKRYITN
APFADVILVMARTNAEALPKNAHVSAFLVPRDAPGVSIGKPDGKMGQAGSQIADVILEDVHVDGDALLGGEEGIGFRAAM
QSLDNGRLSVAAASVGYAKRMLDTGLRYAMERKAFGEPIASFQLIQAMLADSKAEIYAADCMLNDACARADRGEKILVEA
AATKMFASEMCGRVADRVVQIHGGAGYLKEYLAERFYRDCRIYRIYEGTTQIQQLVIAKNMIRDYAG

Sequences:

>Translated_387_residues
MTNAGMDADIYGAFIEQLQRYVRERLIPAEDQLEELGRVPDDILAEMRDMGLFGVTMPEEYGGAGMNISQYVGFIRELAY
AAPAYRSIVSINIGMVCKSILGFGTEQQKAHWLPKLASGSIAAFGLTEPDSGSDSAAMKTRAVPSGNGYVLNGTKRYITN
APFADVILVMARTNAEALPKNAHVSAFLVPRDAPGVSIGKPDGKMGQAGSQIADVILEDVHVDGDALLGGEEGIGFRAAM
QSLDNGRLSVAAASVGYAKRMLDTGLRYAMERKAFGEPIASFQLIQAMLADSKAEIYAADCMLNDACARADRGEKILVEA
AATKMFASEMCGRVADRVVQIHGGAGYLKEYLAERFYRDCRIYRIYEGTTQIQQLVIAKNMIRDYAG
>Mature_386_residues
TNAGMDADIYGAFIEQLQRYVRERLIPAEDQLEELGRVPDDILAEMRDMGLFGVTMPEEYGGAGMNISQYVGFIRELAYA
APAYRSIVSINIGMVCKSILGFGTEQQKAHWLPKLASGSIAAFGLTEPDSGSDSAAMKTRAVPSGNGYVLNGTKRYITNA
PFADVILVMARTNAEALPKNAHVSAFLVPRDAPGVSIGKPDGKMGQAGSQIADVILEDVHVDGDALLGGEEGIGFRAAMQ
SLDNGRLSVAAASVGYAKRMLDTGLRYAMERKAFGEPIASFQLIQAMLADSKAEIYAADCMLNDACARADRGEKILVEAA
ATKMFASEMCGRVADRVVQIHGGAGYLKEYLAERFYRDCRIYRIYEGTTQIQQLVIAKNMIRDYAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=378, Percent_Identity=38.3597883597884, Blast_Score=259, Evalue=2e-69,
Organism=Homo sapiens, GI76496475, Length=372, Percent_Identity=37.9032258064516, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI4557235, Length=372, Percent_Identity=37.9032258064516, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI4501859, Length=368, Percent_Identity=33.9673913043478, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI187960098, Length=370, Percent_Identity=34.5945945945946, Blast_Score=220, Evalue=1e-57,
Organism=Homo sapiens, GI4557231, Length=375, Percent_Identity=34.4, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI21361497, Length=355, Percent_Identity=37.1830985915493, Blast_Score=219, Evalue=2e-57,
Organism=Homo sapiens, GI226958412, Length=373, Percent_Identity=31.3672922252011, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI226958414, Length=373, Percent_Identity=32.4396782841823, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI4501857, Length=377, Percent_Identity=33.6870026525199, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI7656849, Length=366, Percent_Identity=30.8743169398907, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI4503943, Length=376, Percent_Identity=32.7127659574468, Blast_Score=166, Evalue=3e-41,
Organism=Homo sapiens, GI7669494, Length=364, Percent_Identity=32.6923076923077, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI48976061, Length=388, Percent_Identity=27.0618556701031, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI211971008, Length=388, Percent_Identity=27.0618556701031, Blast_Score=122, Evalue=7e-28,
Organism=Homo sapiens, GI38505218, Length=396, Percent_Identity=24.7474747474747, Blast_Score=112, Evalue=4e-25,
Organism=Escherichia coli, GI87081958, Length=352, Percent_Identity=32.1022727272727, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1786223, Length=348, Percent_Identity=29.0229885057471, Blast_Score=144, Evalue=9e-36,
Organism=Escherichia coli, GI87081702, Length=365, Percent_Identity=29.3150684931507, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI87082384, Length=290, Percent_Identity=25.5172413793103, Blast_Score=69, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17534899, Length=372, Percent_Identity=35.4838709677419, Blast_Score=226, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI17506239, Length=372, Percent_Identity=33.8709677419355, Blast_Score=223, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI17508101, Length=362, Percent_Identity=34.2541436464088, Blast_Score=221, Evalue=4e-58,
Organism=Caenorhabditis elegans, GI17569725, Length=374, Percent_Identity=34.2245989304813, Blast_Score=218, Evalue=3e-57,
Organism=Caenorhabditis elegans, GI17538396, Length=383, Percent_Identity=32.8981723237598, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17570075, Length=372, Percent_Identity=33.8709677419355, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI71985184, Length=352, Percent_Identity=36.6477272727273, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17533517, Length=371, Percent_Identity=28.5714285714286, Blast_Score=179, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI17534353, Length=368, Percent_Identity=30.4347826086957, Blast_Score=171, Evalue=5e-43,
Organism=Caenorhabditis elegans, GI71990804, Length=291, Percent_Identity=32.3024054982818, Blast_Score=159, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI71985192, Length=299, Percent_Identity=35.1170568561873, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI32563615, Length=232, Percent_Identity=36.2068965517241, Blast_Score=153, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17505929, Length=372, Percent_Identity=29.5698924731183, Blast_Score=153, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17551932, Length=372, Percent_Identity=29.3010752688172, Blast_Score=151, Evalue=5e-37,
Organism=Caenorhabditis elegans, GI71982178, Length=269, Percent_Identity=33.457249070632, Blast_Score=150, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI17531909, Length=242, Percent_Identity=32.2314049586777, Blast_Score=114, Evalue=9e-26,
Organism=Caenorhabditis elegans, GI17562446, Length=334, Percent_Identity=29.3413173652695, Blast_Score=108, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI17531913, Length=178, Percent_Identity=29.2134831460674, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI86563381, Length=283, Percent_Identity=26.5017667844523, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI86563383, Length=283, Percent_Identity=26.5017667844523, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI21356377, Length=368, Percent_Identity=37.2282608695652, Blast_Score=238, Evalue=4e-63,
Organism=Drosophila melanogaster, GI24660351, Length=368, Percent_Identity=36.4130434782609, Blast_Score=234, Evalue=6e-62,
Organism=Drosophila melanogaster, GI24646207, Length=363, Percent_Identity=38.2920110192837, Blast_Score=226, Evalue=3e-59,
Organism=Drosophila melanogaster, GI24666513, Length=373, Percent_Identity=34.3163538873995, Blast_Score=222, Evalue=4e-58,
Organism=Drosophila melanogaster, GI281363737, Length=357, Percent_Identity=37.2549019607843, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI21355753, Length=368, Percent_Identity=29.6195652173913, Blast_Score=182, Evalue=4e-46,
Organism=Drosophila melanogaster, GI19920834, Length=368, Percent_Identity=32.3369565217391, Blast_Score=163, Evalue=2e-40,
Organism=Drosophila melanogaster, GI24652780, Length=348, Percent_Identity=22.1264367816092, Blast_Score=72, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 41846; Mature: 41715

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNAGMDADIYGAFIEQLQRYVRERLIPAEDQLEELGRVPDDILAEMRDMGLFGVTMPEE
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCEEECCCCHH
YGGAGMNISQYVGFIRELAYAAPAYRSIVSINIGMVCKSILGFGTEQQKAHWLPKLASGS
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHCCCC
IAAFGLTEPDSGSDSAAMKTRAVPSGNGYVLNGTKRYITNAPFADVILVMARTNAEALPK
EEEEECCCCCCCCCCHHHHCCCCCCCCCEEECCCHHHHCCCCHHHHHHHHCCCCHHHCCC
NAHVSAFLVPRDAPGVSIGKPDGKMGQAGSQIADVILEDVHVDGDALLGGEEGIGFRAAM
CCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHH
QSLDNGRLSVAAASVGYAKRMLDTGLRYAMERKAFGEPIASFQLIQAMLADSKAEIYAAD
HHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEHH
CMLNDACARADRGEKILVEAAATKMFASEMCGRVADRVVQIHGGAGYLKEYLAERFYRDC
HHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHCC
RIYRIYEGTTQIQQLVIAKNMIRDYAG
EEEEEECCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TNAGMDADIYGAFIEQLQRYVRERLIPAEDQLEELGRVPDDILAEMRDMGLFGVTMPEE
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCEEECCCCHH
YGGAGMNISQYVGFIRELAYAAPAYRSIVSINIGMVCKSILGFGTEQQKAHWLPKLASGS
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHCCCC
IAAFGLTEPDSGSDSAAMKTRAVPSGNGYVLNGTKRYITNAPFADVILVMARTNAEALPK
EEEEECCCCCCCCCCHHHHCCCCCCCCCEEECCCHHHHCCCCHHHHHHHHCCCCHHHCCC
NAHVSAFLVPRDAPGVSIGKPDGKMGQAGSQIADVILEDVHVDGDALLGGEEGIGFRAAM
CCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHH
QSLDNGRLSVAAASVGYAKRMLDTGLRYAMERKAFGEPIASFQLIQAMLADSKAEIYAAD
HHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEHH
CMLNDACARADRGEKILVEAAATKMFASEMCGRVADRVVQIHGGAGYLKEYLAERFYRDC
HHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHCC
RIYRIYEGTTQIQQLVIAKNMIRDYAG
EEEEEECCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]