Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488451

Identifier: 103488451

GI number: 103488451

Start: 3118362

End: 3118868

Strand: Reverse

Name: 103488451

Synonym: Sala_2974

Alternate gene names: NA

Gene position: 3118868-3118362 (Counterclockwise)

Preceding gene: 103488454

Following gene: 103488448

Centisome position: 93.23

GC content: 71.99

Gene sequence:

>507_bases
GTGAAACGGTGTCTTTTCCTGCTCGCAGCCCTCTTTTTCGGCGCGCCGCCGGCCGCCGCGCAATGTCTGCTCTGCGCGCA
GGATGCGGCGGCGGGTCAGGGGCGCAAGGCCGAAACGCCGCTGCGCATCGACGTCGAAACGCGGCTCGACATGGGCCGGA
TCGCAGTCGGCGCGATGGGTGGCGAGGTCGAGATCGATCCCGCCTCCGGCGCGCGGCGGCTGCGCGGCGACCTCGTCGAC
CTCGGCGGCTTTGCGCTGTCGGGCACCGTGACGGTGCGCGGCGAGCCAGGCGCCGAAGTGCGCGTGATCCTGCCCGCCAG
CGTCGACCTGACCAGCGGCCACGGCCGCACCGCGCGCGTTACCGGGCTGGTGACCGACCTGTCGGCGGCGCCGCGGCTCG
GCGCCGATGGCCGCCTGCAATTCCGCTTTGGCGGCCGTTTGCAGGTCGCGGCGCTCGACGACGGCGATTATCGCGGCCGC
ATTCCGGTGACGGTCGAGTATCAATAG

Upstream 100 bases:

>100_bases
TTCTTCGCCTTCATATCGGAGCGGTGCGGCGCGGCAACAAGGGGGCAATCGGCGCAACGGCTTTACGCCGAATTAACCCT
GTTTGACGCATGAAAGCCGC

Downstream 100 bases:

>100_bases
GTCAGGCGGCTTTGGGGTGGGGAACCGACGTCTATTTGTCCAGCGTCGTCATCGCGGACTTGATCCGCGATTCACTGCGG
CGCTGAAGTCATGAACCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MKRCLFLLAALFFGAPPAAAQCLLCAQDAAAGQGRKAETPLRIDVETRLDMGRIAVGAMGGEVEIDPASGARRLRGDLVD
LGGFALSGTVTVRGEPGAEVRVILPASVDLTSGHGRTARVTGLVTDLSAAPRLGADGRLQFRFGGRLQVAALDDGDYRGR
IPVTVEYQ

Sequences:

>Translated_168_residues
MKRCLFLLAALFFGAPPAAAQCLLCAQDAAAGQGRKAETPLRIDVETRLDMGRIAVGAMGGEVEIDPASGARRLRGDLVD
LGGFALSGTVTVRGEPGAEVRVILPASVDLTSGHGRTARVTGLVTDLSAAPRLGADGRLQFRFGGRLQVAALDDGDYRGR
IPVTVEYQ
>Mature_168_residues
MKRCLFLLAALFFGAPPAAAQCLLCAQDAAAGQGRKAETPLRIDVETRLDMGRIAVGAMGGEVEIDPASGARRLRGDLVD
LGGFALSGTVTVRGEPGAEVRVILPASVDLTSGHGRTARVTGLVTDLSAAPRLGADGRLQFRFGGRLQVAALDDGDYRGR
IPVTVEYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17546; Mature: 17546

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRCLFLLAALFFGAPPAAAQCLLCAQDAAAGQGRKAETPLRIDVETRLDMGRIAVGAMG
CHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCEEEEEECC
GEVEIDPASGARRLRGDLVDLGGFALSGTVTVRGEPGAEVRVILPASVDLTSGHGRTARV
CEEEEECCCCCHHHCCCEEECCCEEEEEEEEEECCCCCEEEEEEECCEEEECCCCCEEEE
TGLVTDLSAAPRLGADGRLQFRFGGRLQVAALDDGDYRGRIPVTVEYQ
EEEEECCCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCEEEEEC
>Mature Secondary Structure
MKRCLFLLAALFFGAPPAAAQCLLCAQDAAAGQGRKAETPLRIDVETRLDMGRIAVGAMG
CHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCEEEEEECC
GEVEIDPASGARRLRGDLVDLGGFALSGTVTVRGEPGAEVRVILPASVDLTSGHGRTARV
CEEEEECCCCCHHHCCCEEECCCEEEEEEEEEECCCCCEEEEEEECCEEEECCCCCEEEE
TGLVTDLSAAPRLGADGRLQFRFGGRLQVAALDDGDYRGRIPVTVEYQ
EEEEECCCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA