Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488448

Identifier: 103488448

GI number: 103488448

Start: 3114575

End: 3115075

Strand: Reverse

Name: 103488448

Synonym: Sala_2971

Alternate gene names: NA

Gene position: 3115075-3114575 (Counterclockwise)

Preceding gene: 103488451

Following gene: 103488439

Centisome position: 93.12

GC content: 71.66

Gene sequence:

>501_bases
ATGCCGCTCTCGGCCTTCGCGCGACGGGCGTTGCACCCCCGCGCGGCGACCGCTAGTTTCATGGCCATGAAACATGTCCT
CGTTGTCCCCGCCGCCGTCCTGCTCGCCGTGTCGCTTGCCGCGTGCAACCAGCCCGCGCCGCCGCCCGACAACGCCCCCG
AGGTCGCGGGCGAACCGCTCGCGACGCGCGCGGTGATGATCGGCACCGAGGGGCCAAGCCTGCCCGCCTGTTCGAGCATC
AGCCGGGTCAAGGACGGCGGCACCGACGTCTATTGGGCGCCGAACGAGACGCGCGCGGTGAAGGCGAAGCTGGCCGGCGG
CGCGCGCGTGTCGCTGTGCGAAGCGGCGGAGAATGACGCCTGGTTCGGCATCGTCTTTGCCGCGCCCGGCACCGATCCCG
ACATGTGCGGCGTCGGCAGGTCGGTGCCGAATGCCCGCGAATATCAGGGGCCGTGCCGCTGGGGCTGGATTCGCGGCGGA
ACGGTGCAGCTGGGGGGCTAA

Upstream 100 bases:

>100_bases
TTGGCGTTGGGCTGTTTTGCGGCGCCTTCGGGCGCGCTGTTCTCGGGGGTGTCTGTCATGTCGATTATATAGGGTCGGCG
CGCATAAAACCCAAGCGAAA

Downstream 100 bases:

>100_bases
CGCGGAGCGGTGGGGCGCCGTTATGGTGAGTTTGGCCGATTGCGGACATAATAAGATCCTCCCCATCGCAAGTCGATGGG
GAGGATCATCAACGGCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MPLSAFARRALHPRAATASFMAMKHVLVVPAAVLLAVSLAACNQPAPPPDNAPEVAGEPLATRAVMIGTEGPSLPACSSI
SRVKDGGTDVYWAPNETRAVKAKLAGGARVSLCEAAENDAWFGIVFAAPGTDPDMCGVGRSVPNAREYQGPCRWGWIRGG
TVQLGG

Sequences:

>Translated_166_residues
MPLSAFARRALHPRAATASFMAMKHVLVVPAAVLLAVSLAACNQPAPPPDNAPEVAGEPLATRAVMIGTEGPSLPACSSI
SRVKDGGTDVYWAPNETRAVKAKLAGGARVSLCEAAENDAWFGIVFAAPGTDPDMCGVGRSVPNAREYQGPCRWGWIRGG
TVQLGG
>Mature_165_residues
PLSAFARRALHPRAATASFMAMKHVLVVPAAVLLAVSLAACNQPAPPPDNAPEVAGEPLATRAVMIGTEGPSLPACSSIS
RVKDGGTDVYWAPNETRAVKAKLAGGARVSLCEAAENDAWFGIVFAAPGTDPDMCGVGRSVPNAREYQGPCRWGWIRGGT
VQLGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17165; Mature: 17034

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSAFARRALHPRAATASFMAMKHVLVVPAAVLLAVSLAACNQPAPPPDNAPEVAGEPL
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
ATRAVMIGTEGPSLPACSSISRVKDGGTDVYWAPNETRAVKAKLAGGARVSLCEAAENDA
CCEEEEEECCCCCCCCCHHHHHHCCCCCEEEECCCCCEEEEEECCCCCEEEEECCCCCCC
WFGIVFAAPGTDPDMCGVGRSVPNAREYQGPCRWGWIRGGTVQLGG
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEECC
>Mature Secondary Structure 
PLSAFARRALHPRAATASFMAMKHVLVVPAAVLLAVSLAACNQPAPPPDNAPEVAGEPL
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
ATRAVMIGTEGPSLPACSSISRVKDGGTDVYWAPNETRAVKAKLAGGARVSLCEAAENDA
CCEEEEEECCCCCCCCCHHHHHHCCCCCEEEECCCCCEEEEEECCCCCEEEEECCCCCCC
WFGIVFAAPGTDPDMCGVGRSVPNAREYQGPCRWGWIRGGTVQLGG
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA