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The map label for this gene is rlpA [C]

Identifier: 103488450

GI number: 103488450

Start: 3117794

End: 3118198

Strand: Direct

Name: rlpA [C]

Synonym: Sala_2973

Alternate gene names: 103488450

Gene position: 3117794-3118198 (Clockwise)

Preceding gene: 103488449

Following gene: 103488452

Centisome position: 93.2

GC content: 67.16

Gene sequence:

>405_bases
ATGCGGGCCTTTTCAGCCATGCTGCTTCCGCTTCTGCTGACGGCGTCAGCCGCGGCGCAGGAAGTCCCGATCGTCGATGA
GGCGCTTGCCGAGATCGTACCGGAAACCGAGATCGTCGGCGGCGTCGCAAGCTATTATGGCAATGAACTTGCGGGCAACC
GCACCGCGAGCGGCGAACGCTTCGATCCCGGCCAGCTCACCGCGGCGCACCGCACCTTGCCCTTCGGCTCGATGGTGCGC
GTCACCAATGTCGCCACCGGCGACAGCGTCGTCGTGCGGATCAACGACCGCGGACCCTTTGCCCATGGCCGGGTGATCGA
CGTCAGCCACGCCGCCGCGCGCGAAATCGGTCTGCACCGCAGCGGCACCGCGCGCGTGAAACTGGCGCTGCTCGCCGACG
ATTGA

Upstream 100 bases:

>100_bases
ACGCACATCCGGCCGCAAATAGGGTTCGATTGGACGCGCGGCGGCTTGCCTCGGCACGCCGCCGCTGCTTTGGGCGCTTC
CTCTGACAAGAGGATGTGTC

Downstream 100 bases:

>100_bases
GCAGGGAGGTTGCTCCATTGACCGGTTTCGGTCGCCGCTTTCACCGTCACCCCGGACCTGATCCGGGGTTCATGACTTCA
GCGCCGCAGTGAATCGCGGA

Product: rare lipoprotein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MRAFSAMLLPLLLTASAAAQEVPIVDEALAEIVPETEIVGGVASYYGNELAGNRTASGERFDPGQLTAAHRTLPFGSMVR
VTNVATGDSVVVRINDRGPFAHGRVIDVSHAAAREIGLHRSGTARVKLALLADD

Sequences:

>Translated_134_residues
MRAFSAMLLPLLLTASAAAQEVPIVDEALAEIVPETEIVGGVASYYGNELAGNRTASGERFDPGQLTAAHRTLPFGSMVR
VTNVATGDSVVVRINDRGPFAHGRVIDVSHAAAREIGLHRSGTARVKLALLADD
>Mature_134_residues
MRAFSAMLLPLLLTASAAAQEVPIVDEALAEIVPETEIVGGVASYYGNELAGNRTASGERFDPGQLTAAHRTLPFGSMVR
VTNVATGDSVVVRINDRGPFAHGRVIDVSHAAAREIGLHRSGTARVKLALLADD

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=94, Percent_Identity=50, Blast_Score=94, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR012997 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 14076; Mature: 14076

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAFSAMLLPLLLTASAAAQEVPIVDEALAEIVPETEIVGGVASYYGNELAGNRTASGER
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCC
FDPGQLTAAHRTLPFGSMVRVTNVATGDSVVVRINDRGPFAHGRVIDVSHAAAREIGLHR
CCCCCEEEHHCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCEEECCHHHHHHHCCCC
SGTARVKLALLADD
CCCCEEEEEEEECC
>Mature Secondary Structure
MRAFSAMLLPLLLTASAAAQEVPIVDEALAEIVPETEIVGGVASYYGNELAGNRTASGER
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCC
FDPGQLTAAHRTLPFGSMVRVTNVATGDSVVVRINDRGPFAHGRVIDVSHAAAREIGLHR
CCCCCEEEHHCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCEEECCHHHHHHHCCCC
SGTARVKLALLADD
CCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]