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The map label for this gene is msrB [H]

Identifier: 103488452

GI number: 103488452

Start: 3118996

End: 3119403

Strand: Direct

Name: msrB [H]

Synonym: Sala_2975

Alternate gene names: 103488452

Gene position: 3118996-3119403 (Clockwise)

Preceding gene: 103488450

Following gene: 103488453

Centisome position: 93.24

GC content: 67.16

Gene sequence:

>408_bases
ATGACCGACCCGAAAACCGACAAGCCGCTCGACCCCATGGCCCATCATGTGCTGCGCGAGGGCGGCACCGAACGCGCCTT
CACCGGCAAATATACCGACCATAAGGGCGATGGCATCTATCGCTGCGCGGGTTGCGGCGCGCCGCTGTTCGACAGCCGCA
CCAAATATGACAGCGGGTCGGGCTGGCCAAGCTATACGGCGCCTGCAAACGAAGCGGCGGTGACCGAACATCGCGACGCG
AGCCACGGGATGATCCGCACCGAAGTGCGCTGCGCGACGTGCGAGGGCCACCTCGGCCATGTGTTCCCCGACGGCCCCGG
ACCGACCGGCCTGCGCTATTGCATCAACAGCGCGGCGCTTGACTTCGCCGACCGCGCGCCGGATGAGGCGTCAACCGGCG
AGGGCTGA

Upstream 100 bases:

>100_bases
ATTCGGCGTAAAGCCGTTGCGCCGATTGCCCCCTTGTTGCCGCGCCGCACCGCTCCGATATGAAGGCGAAGAAGCGCGAC
GCGCCCGCTGGAGACCGCCG

Downstream 100 bases:

>100_bases
ACCCTTCGCGGACTGACGCATCAGGGGCGCAGTGAGAGAAGGAATACGGGCTTTGCGCCGCGAGAGACAGCAAGCTTCGT
CGAATAAATCGTCATCGCCC

Product: protein-methionine-S-oxide reductase

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MTDPKTDKPLDPMAHHVLREGGTERAFTGKYTDHKGDGIYRCAGCGAPLFDSRTKYDSGSGWPSYTAPANEAAVTEHRDA
SHGMIRTEVRCATCEGHLGHVFPDGPGPTGLRYCINSAALDFADRAPDEASTGEG

Sequences:

>Translated_135_residues
MTDPKTDKPLDPMAHHVLREGGTERAFTGKYTDHKGDGIYRCAGCGAPLFDSRTKYDSGSGWPSYTAPANEAAVTEHRDA
SHGMIRTEVRCATCEGHLGHVFPDGPGPTGLRYCINSAALDFADRAPDEASTGEG
>Mature_134_residues
TDPKTDKPLDPMAHHVLREGGTERAFTGKYTDHKGDGIYRCAGCGAPLFDSRTKYDSGSGWPSYTAPANEAAVTEHRDAS
HGMIRTEVRCATCEGHLGHVFPDGPGPTGLRYCINSAALDFADRAPDEASTGEG

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI301336164, Length=135, Percent_Identity=53.3333333333333, Blast_Score=146, Evalue=6e-36,
Organism=Homo sapiens, GI301336162, Length=135, Percent_Identity=53.3333333333333, Blast_Score=146, Evalue=6e-36,
Organism=Homo sapiens, GI73089054, Length=135, Percent_Identity=53.3333333333333, Blast_Score=146, Evalue=6e-36,
Organism=Homo sapiens, GI37620216, Length=128, Percent_Identity=56.25, Blast_Score=145, Evalue=8e-36,
Organism=Homo sapiens, GI117606353, Length=132, Percent_Identity=47.7272727272727, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI1788077, Length=129, Percent_Identity=51.937984496124, Blast_Score=144, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17553450, Length=114, Percent_Identity=48.2456140350877, Blast_Score=109, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI115532676, Length=114, Percent_Identity=48.2456140350877, Blast_Score=109, Evalue=5e-25,
Organism=Saccharomyces cerevisiae, GI6319816, Length=128, Percent_Identity=41.40625, Blast_Score=102, Evalue=2e-23,
Organism=Drosophila melanogaster, GI45553335, Length=125, Percent_Identity=52.8, Blast_Score=137, Evalue=2e-33,
Organism=Drosophila melanogaster, GI21356369, Length=125, Percent_Identity=52.8, Blast_Score=137, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24645799, Length=125, Percent_Identity=52.8, Blast_Score=137, Evalue=3e-33,
Organism=Drosophila melanogaster, GI221378664, Length=120, Percent_Identity=53.3333333333333, Blast_Score=136, Evalue=3e-33,
Organism=Drosophila melanogaster, GI221378662, Length=127, Percent_Identity=50.3937007874016, Blast_Score=134, Evalue=1e-32,
Organism=Drosophila melanogaster, GI24645804, Length=136, Percent_Identity=48.5294117647059, Blast_Score=132, Evalue=6e-32,
Organism=Drosophila melanogaster, GI24645801, Length=136, Percent_Identity=48.5294117647059, Blast_Score=132, Evalue=8e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 14412; Mature: 14281

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPKTDKPLDPMAHHVLREGGTERAFTGKYTDHKGDGIYRCAGCGAPLFDSRTKYDSGS
CCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
GWPSYTAPANEAAVTEHRDASHGMIRTEVRCATCEGHLGHVFPDGPGPTGLRYCINSAAL
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
DFADRAPDEASTGEG
HHHHCCCCCCCCCCC
>Mature Secondary Structure 
TDPKTDKPLDPMAHHVLREGGTERAFTGKYTDHKGDGIYRCAGCGAPLFDSRTKYDSGS
CCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
GWPSYTAPANEAAVTEHRDASHGMIRTEVRCATCEGHLGHVFPDGPGPTGLRYCINSAAL
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
DFADRAPDEASTGEG
HHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA