| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is fliG [H]
Identifier: 103488412
GI number: 103488412
Start: 3079315
End: 3080346
Strand: Reverse
Name: fliG [H]
Synonym: Sala_2935
Alternate gene names: 103488412
Gene position: 3080346-3079315 (Counterclockwise)
Preceding gene: 103488413
Following gene: 103488411
Centisome position: 92.08
GC content: 66.28
Gene sequence:
>1032_bases GTGCCTGATGCCGCCGAACTCGACGCCGCGCCCCAGAAGCCCGCGATCGACGGATCGGCGGCCGCGGCGATCCTGCTGAT GCTGCTCGACGAGAGCGAGGCCGCGACGATCCTGAAGCATCTCGGCCCCGAAGAAGTGCGCCAGCTGGCGAAAGCGATGT TCGACACCGCCAACGCCAGCGAGCAGGAGATCGGACTGGCGCTCGAACAGTTCGTGATGCGCAGCCGCGACGTCAGCGCG CTCGCGATCGGCGCCGACACGCGCATCCGCACGGTGGTGACGCAGGCGGTCGGCAACGTCCGCGCCGACAATATCCTGGC CGCCGTCGCGCCGCAACGCAGCGCCGCCTCGCTCGAAATGCTGCGCTGGATGGACGTCGATGCGATCAGCGCGCTGCTTG CCAGCGAGCATCCGCAGGTCGGCGCGCTCATTCTCTCGGTGCTCGTCCCCGACGTCGCCGCGCGCGCGATCGAGACGCTC GACGAAGTTCTGCAGGCCGATCTCGTGCTGCGCGCCGCAATGCTGACCTCTGTCCCGGCCGCCGCGATCGAGGATCTGGA GGCGGTGCTCGCGAGCGCCAATGTCGACGGCCAGCGCGTCGCCAAGCAGGCGATCGGCGGGCCAAGCGACGTCGCCAAGA TCATGAAGAAGATGCCGAAGCAGCTCAGCGAACGCACGCTGCGTTCGCTCAAGAAGCACGACCGCATCCTCGCGCAGACG ATCGAGGAAGAGATGTTCATCTTCGAAAATCTCCGCGACCTCGACAAGAAGAGCCTCAGCAGCGTGCTGCGCTCGGTCGA TGCGGCACAGCTCGCGATCGCACTCAAGGGCGCCGACGAGGATATGGTCGACATGTGCCTCGCCACCATGTCGCAGCGCG CCGCCGAAACCATCCGCGACGAGATGGCCGAAATGACGATGGTCAAGCGCGCCGACGTCGAGGATGCGCAAAAGAGCGTG ATGCAGATCGTCCGCCAGATGGCGGCGAATGGCGAAATCATGATCGCGGGCGGGGGCGACGATTATGTCTGA
Upstream 100 bases:
>100_bases CCAAGCTATGAAGCGCGCGCCAATCTCGTGCGCGCCTTTGTCCGCCAGGATTCGGCACGCGCCGCGCTCGTCGTGCGCCA CCTGATGCAGGAGGGCGCCC
Downstream 100 bases:
>100_bases CCTCGCCGCCGAAACGGGCTTTGCCCCTGTCAGCCTGGCCGACGCGATGGCGCGGCGCAGCGGCTTTCGCCCGCTGTCCT TCGCCCGCGCCGCTGAAACC
Product: flagellar motor switch protein FliG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MPDAAELDAAPQKPAIDGSAAAAILLMLLDESEAATILKHLGPEEVRQLAKAMFDTANASEQEIGLALEQFVMRSRDVSA LAIGADTRIRTVVTQAVGNVRADNILAAVAPQRSAASLEMLRWMDVDAISALLASEHPQVGALILSVLVPDVAARAIETL DEVLQADLVLRAAMLTSVPAAAIEDLEAVLASANVDGQRVAKQAIGGPSDVAKIMKKMPKQLSERTLRSLKKHDRILAQT IEEEMFIFENLRDLDKKSLSSVLRSVDAAQLAIALKGADEDMVDMCLATMSQRAAETIRDEMAEMTMVKRADVEDAQKSV MQIVRQMAANGEIMIAGGGDDYV
Sequences:
>Translated_343_residues MPDAAELDAAPQKPAIDGSAAAAILLMLLDESEAATILKHLGPEEVRQLAKAMFDTANASEQEIGLALEQFVMRSRDVSA LAIGADTRIRTVVTQAVGNVRADNILAAVAPQRSAASLEMLRWMDVDAISALLASEHPQVGALILSVLVPDVAARAIETL DEVLQADLVLRAAMLTSVPAAAIEDLEAVLASANVDGQRVAKQAIGGPSDVAKIMKKMPKQLSERTLRSLKKHDRILAQT IEEEMFIFENLRDLDKKSLSSVLRSVDAAQLAIALKGADEDMVDMCLATMSQRAAETIRDEMAEMTMVKRADVEDAQKSV MQIVRQMAANGEIMIAGGGDDYV >Mature_342_residues PDAAELDAAPQKPAIDGSAAAAILLMLLDESEAATILKHLGPEEVRQLAKAMFDTANASEQEIGLALEQFVMRSRDVSAL AIGADTRIRTVVTQAVGNVRADNILAAVAPQRSAASLEMLRWMDVDAISALLASEHPQVGALILSVLVPDVAARAIETLD EVLQADLVLRAAMLTSVPAAAIEDLEAVLASANVDGQRVAKQAIGGPSDVAKIMKKMPKQLSERTLRSLKKHDRILAQTI EEEMFIFENLRDLDKKSLSSVLRSVDAAQLAIALKGADEDMVDMCLATMSQRAAETIRDEMAEMTMVKRADVEDAQKSVM QIVRQMAANGEIMIAGGGDDYV
Specific function: FliG is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot
COG id: COG1536
COG function: function code N; Flagellar motor switch protein
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side (Potential). Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FliG family [H]
Homologues:
Organism=Escherichia coli, GI1788249, Length=329, Percent_Identity=36.7781155015198, Blast_Score=195, Evalue=4e-51,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000090 - InterPro: IPR023087 - InterPro: IPR011002 [H]
Pfam domain/function: PF01706 FliG_C [H]
EC number: NA
Molecular weight: Translated: 36739; Mature: 36608
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDAAELDAAPQKPAIDGSAAAAILLMLLDESEAATILKHLGPEEVRQLAKAMFDTANAS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCC EQEIGLALEQFVMRSRDVSALAIGADTRIRTVVTQAVGNVRADNILAAVAPQRSAASLEM HHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHH LRWMDVDAISALLASEHPQVGALILSVLVPDVAARAIETLDEVLQADLVLRAAMLTSVPA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH AAIEDLEAVLASANVDGQRVAKQAIGGPSDVAKIMKKMPKQLSERTLRSLKKHDRILAQT HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEEEMFIFENLRDLDKKSLSSVLRSVDAAQLAIALKGADEDMVDMCLATMSQRAAETIRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH EMAEMTMVKRADVEDAQKSVMQIVRQMAANGEIMIAGGGDDYV HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC >Mature Secondary Structure PDAAELDAAPQKPAIDGSAAAAILLMLLDESEAATILKHLGPEEVRQLAKAMFDTANAS CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCC EQEIGLALEQFVMRSRDVSALAIGADTRIRTVVTQAVGNVRADNILAAVAPQRSAASLEM HHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHH LRWMDVDAISALLASEHPQVGALILSVLVPDVAARAIETLDEVLQADLVLRAAMLTSVPA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH AAIEDLEAVLASANVDGQRVAKQAIGGPSDVAKIMKKMPKQLSERTLRSLKKHDRILAQT HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEEEMFIFENLRDLDKKSLSSVLRSVDAAQLAIALKGADEDMVDMCLATMSQRAAETIRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH EMAEMTMVKRADVEDAQKSVMQIVRQMAANGEIMIAGGGDDYV HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10984043; 8675317 [H]