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The map label for this gene is fliF [H]

Identifier: 103488413

GI number: 103488413

Start: 3080339

End: 3081994

Strand: Reverse

Name: fliF [H]

Synonym: Sala_2936

Alternate gene names: 103488413

Gene position: 3081994-3080339 (Counterclockwise)

Preceding gene: 103488414

Following gene: 103488412

Centisome position: 92.13

GC content: 69.99

Gene sequence:

>1656_bases
ATGGCCGACGCGCAAACCCTGACCCCCGTCGATACCAGCGGCGCGAACCGCTTGCCCGCCCCCGTCCTCGGCGGCCGCCT
CGCGCCGCTCACCCAGTTCGTCCGCCAGCCCGCGGTGCAGCGCGCGCTGCCGGCGATCGCGATGACGGCGGCGATCGGCA
TCGCCGCGCTCGCTTATTTCACGATGCAGACGGCGCCACAGGCGCAACTCTTCGCCGGGCTCGACGACGCCGACAAGGCG
GCGGTCGCCGAGGCTTTGCAGGCGCAGGGCATCGGCCACAGCATCGATGGCACGACCGGCGCGCTCACCGTCGATGCCGA
CAAGCTGCATCAGGCGCGCATCGCGCTCGCCGGACAGGGCCTGCCCAAGGCGGCGCCGAGCGGCGACAGCCTGATCGCCG
CGCTGCCCATGGGGTCGAGCCGCGCGATCGAGGGCGAAGCATTGCGTTCGGCGCGCGAAGCCGACCTGTCGCGCACGATC
GAAACGATCGACGCGGTCAAGAGCGCACGCGTCCATATCGCCGCGGCCGAACCCAGCCTGTTCGTGCGCGACGACAAGCC
CGCGACCGCATCGGTGATGCTGACGCTGCAGAACGGTCGCGCGCTCGGCGACGGACAGGTGCAGGCGATCCGTTTCCTCG
TGGCCTCGTCGGTGCCCGGCATGAACGCCGATCAGGTGTCGGTGATCGACCAGCGCGGCGCGCTGCTGTCCGACACCGCG
AGCGGCAGCGACATGAAGGCGTTCCAGTTGCAGTTGCAGGTCGAGGACCGTTTCCGCCGCGCGCTCGACACGCTGCTCGG
CCCGATGCTCGGCGCGGGCAATTATACGGTCGAGGTTCATGCCGACGTCGATATGTCCGAAAGCCAGGCGACGCGCGAAA
GCTTCCCCGAAAACGACCGCGCGCTGACCAGCGAACAGATCACCCGTTCGGTCAGCGGCACGGCCAACGCTCCGGCGGTC
GGAATCCCCGGCGCGCTCGCCAACCAGCCCCCGCAGGCGACGACCATCACCGCCGAGGGGCCGCAGCCCGCACCGGCCAA
TGCGCCCCTCCCCGGCACCGAAAGCAACGAGAATGCCGCGCGCGCTTACGAGGTCGGGCGCGAGATTTCGGTGACGCACT
CACCGCAGGGCAAGCTGCGCCGCGTTTCGGTCGCGGTCGCGCTCAATCAGGGCAAGAAGGCGCTGACGCAGGCCGACCTC
GCCAAGATCGACGCGCTCGTCAAAGGCGCGATCGGTTACGACGCCGCGCGCGGCGATATGGTCGCGATCAACCAGCGTCC
CTTCGCGCCGGTCGAGGATACGGCCCCCGCCTTCTACGATCAGGGCTGGTTCCTGCCGCTGGTCAAACAGGTCGGCGCGA
TCCTGGCGGCGCTGCTTGCCTTCCTGTTCATCGGCCGCCCGATGATCCGCGCCGCCAGGCAGCGCGCCGCCGCGCGCCTC
GAACAGAATCAGGCGCTGGAGGAAACGCTGCTCGCCGCAACCGATCGCCCCGCGCTCGCCAGCGGCGCGAACAGCCGCGA
AATCACGCTCGAAATGATCGAGGCGGCCCCAAGCTATGAAGCGCGCGCCAATCTCGTGCGCGCCTTTGTCCGCCAGGATT
CGGCACGCGCCGCGCTCGTCGTGCGCCACCTGATGCAGGAGGGCGCCCGTGCCTGA

Upstream 100 bases:

>100_bases
CGAGCGGCAGAAGGCCTCGCTCGGTTTCGAAACGACGCTGCAGGTCCGCAACAAGCTGCTCTCCGCCTATCGCGACATCA
TGAACATGCCGGTGTAACCC

Downstream 100 bases:

>100_bases
TGCCGCCGAACTCGACGCCGCGCCCCAGAAGCCCGCGATCGACGGATCGGCGGCCGCGGCGATCCTGCTGATGCTGCTCG
ACGAGAGCGAGGCCGCGACG

Product: flagellar M-ring protein FliF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 551; Mature: 550

Protein sequence:

>551_residues
MADAQTLTPVDTSGANRLPAPVLGGRLAPLTQFVRQPAVQRALPAIAMTAAIGIAALAYFTMQTAPQAQLFAGLDDADKA
AVAEALQAQGIGHSIDGTTGALTVDADKLHQARIALAGQGLPKAAPSGDSLIAALPMGSSRAIEGEALRSAREADLSRTI
ETIDAVKSARVHIAAAEPSLFVRDDKPATASVMLTLQNGRALGDGQVQAIRFLVASSVPGMNADQVSVIDQRGALLSDTA
SGSDMKAFQLQLQVEDRFRRALDTLLGPMLGAGNYTVEVHADVDMSESQATRESFPENDRALTSEQITRSVSGTANAPAV
GIPGALANQPPQATTITAEGPQPAPANAPLPGTESNENAARAYEVGREISVTHSPQGKLRRVSVAVALNQGKKALTQADL
AKIDALVKGAIGYDAARGDMVAINQRPFAPVEDTAPAFYDQGWFLPLVKQVGAILAALLAFLFIGRPMIRAARQRAAARL
EQNQALEETLLAATDRPALASGANSREITLEMIEAAPSYEARANLVRAFVRQDSARAALVVRHLMQEGARA

Sequences:

>Translated_551_residues
MADAQTLTPVDTSGANRLPAPVLGGRLAPLTQFVRQPAVQRALPAIAMTAAIGIAALAYFTMQTAPQAQLFAGLDDADKA
AVAEALQAQGIGHSIDGTTGALTVDADKLHQARIALAGQGLPKAAPSGDSLIAALPMGSSRAIEGEALRSAREADLSRTI
ETIDAVKSARVHIAAAEPSLFVRDDKPATASVMLTLQNGRALGDGQVQAIRFLVASSVPGMNADQVSVIDQRGALLSDTA
SGSDMKAFQLQLQVEDRFRRALDTLLGPMLGAGNYTVEVHADVDMSESQATRESFPENDRALTSEQITRSVSGTANAPAV
GIPGALANQPPQATTITAEGPQPAPANAPLPGTESNENAARAYEVGREISVTHSPQGKLRRVSVAVALNQGKKALTQADL
AKIDALVKGAIGYDAARGDMVAINQRPFAPVEDTAPAFYDQGWFLPLVKQVGAILAALLAFLFIGRPMIRAARQRAAARL
EQNQALEETLLAATDRPALASGANSREITLEMIEAAPSYEARANLVRAFVRQDSARAALVVRHLMQEGARA
>Mature_550_residues
ADAQTLTPVDTSGANRLPAPVLGGRLAPLTQFVRQPAVQRALPAIAMTAAIGIAALAYFTMQTAPQAQLFAGLDDADKAA
VAEALQAQGIGHSIDGTTGALTVDADKLHQARIALAGQGLPKAAPSGDSLIAALPMGSSRAIEGEALRSAREADLSRTIE
TIDAVKSARVHIAAAEPSLFVRDDKPATASVMLTLQNGRALGDGQVQAIRFLVASSVPGMNADQVSVIDQRGALLSDTAS
GSDMKAFQLQLQVEDRFRRALDTLLGPMLGAGNYTVEVHADVDMSESQATRESFPENDRALTSEQITRSVSGTANAPAVG
IPGALANQPPQATTITAEGPQPAPANAPLPGTESNENAARAYEVGREISVTHSPQGKLRRVSVAVALNQGKKALTQADLA
KIDALVKGAIGYDAARGDMVAINQRPFAPVEDTAPAFYDQGWFLPLVKQVGAILAALLAFLFIGRPMIRAARQRAAARLE
QNQALEETLLAATDRPALASGANSREITLEMIEAAPSYEARANLVRAFVRQDSARAALVVRHLMQEGARA

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=444, Percent_Identity=35.3603603603604, Blast_Score=209, Evalue=3e-55,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 57633; Mature: 57502

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADAQTLTPVDTSGANRLPAPVLGGRLAPLTQFVRQPAVQRALPAIAMTAAIGIAALAYF
CCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMQTAPQAQLFAGLDDADKAAVAEALQAQGIGHSIDGTTGALTVDADKLHQARIALAGQG
HHCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHCCC
LPKAAPSGDSLIAALPMGSSRAIEGEALRSAREADLSRTIETIDAVKSARVHIAAAEPSL
CCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCE
FVRDDKPATASVMLTLQNGRALGDGQVQAIRFLVASSVPGMNADQVSVIDQRGALLSDTA
EEECCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEEECCC
SGSDMKAFQLQLQVEDRFRRALDTLLGPMLGAGNYTVEVHADVDMSESQATRESFPENDR
CCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCH
ALTSEQITRSVSGTANAPAVGIPGALANQPPQATTITAEGPQPAPANAPLPGTESNENAA
HHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHH
RAYEVGREISVTHSPQGKLRRVSVAVALNQGKKALTQADLAKIDALVKGAIGYDAARGDM
HHHHCCCEEEEEECCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
VAINQRPFAPVEDTAPAFYDQGWFLPLVKQVGAILAALLAFLFIGRPMIRAARQRAAARL
EEECCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
EQNQALEETLLAATDRPALASGANSREITLEMIEAAPSYEARANLVRAFVRQDSARAALV
HHHHHHHHHHHHHCCCCCHHCCCCCCEEEHEEHHCCCCHHHHHHHHHHHHHCCCCHHHHH
VRHLMQEGARA
HHHHHHHCCCC
>Mature Secondary Structure 
ADAQTLTPVDTSGANRLPAPVLGGRLAPLTQFVRQPAVQRALPAIAMTAAIGIAALAYF
CCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMQTAPQAQLFAGLDDADKAAVAEALQAQGIGHSIDGTTGALTVDADKLHQARIALAGQG
HHCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHCCC
LPKAAPSGDSLIAALPMGSSRAIEGEALRSAREADLSRTIETIDAVKSARVHIAAAEPSL
CCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCE
FVRDDKPATASVMLTLQNGRALGDGQVQAIRFLVASSVPGMNADQVSVIDQRGALLSDTA
EEECCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEEECCC
SGSDMKAFQLQLQVEDRFRRALDTLLGPMLGAGNYTVEVHADVDMSESQATRESFPENDR
CCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCH
ALTSEQITRSVSGTANAPAVGIPGALANQPPQATTITAEGPQPAPANAPLPGTESNENAA
HHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHH
RAYEVGREISVTHSPQGKLRRVSVAVALNQGKKALTQADLAKIDALVKGAIGYDAARGDM
HHHHCCCEEEEEECCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
VAINQRPFAPVEDTAPAFYDQGWFLPLVKQVGAILAALLAFLFIGRPMIRAARQRAAARL
EEECCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
EQNQALEETLLAATDRPALASGANSREITLEMIEAAPSYEARANLVRAFVRQDSARAALV
HHHHHHHHHHHHHCCCCCHHCCCCCCEEEHEEHHCCCCHHHHHHHHHHHHHCCCCHHHHH
VRHLMQEGARA
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA