Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488329

Identifier: 103488329

GI number: 103488329

Start: 3001384

End: 3001677

Strand: Direct

Name: 103488329

Synonym: Sala_2852

Alternate gene names: NA

Gene position: 3001384-3001677 (Clockwise)

Preceding gene: 103488326

Following gene: 103488330

Centisome position: 89.72

GC content: 61.9

Gene sequence:

>294_bases
ATGAAAATCCATATCGAGATCGATTGCACTCCCGAAGAGGCGCGGCGGCTGTTCGGCCTTCCCGACCTCGAACCGCTCCA
CGATATTTATCTCGATCGCGTCAGGGAACTGATGGCCAAGGGCATCACGCCCGAGATGGTGCAGGCGATGGTCAAGACAT
GGGTTCCGATGGGCGAAAGCGGGCTGGGGCTCGTCCAGTCGCTGCTCGGCCAGTTCGGCGGCGGGCTGATGGGTGGTGCG
GCGAAAAATGGCGATGCGGGTGACGACAAGCCCGCCAAGGGACGCAAGAGCTGA

Upstream 100 bases:

>100_bases
AAGCTCTCCTGACTCTTGCTTCTTGGCGGTGAAAGCGCGAAGCTAGCGGCGCCGCGGCTATGGCTCAAGCGGCATACCAT
GACCGGGGCGGAGACAGGCG

Downstream 100 bases:

>100_bases
ACCAAACACCCCCAAGCGACACGATTTTCGCGCTATCGAGCGGGATACCGCCGGCGGCGATTGCGGTCGTGCGCATCAGC
GGCATCGATGCCGCCAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MKIHIEIDCTPEEARRLFGLPDLEPLHDIYLDRVRELMAKGITPEMVQAMVKTWVPMGESGLGLVQSLLGQFGGGLMGGA
AKNGDAGDDKPAKGRKS

Sequences:

>Translated_97_residues
MKIHIEIDCTPEEARRLFGLPDLEPLHDIYLDRVRELMAKGITPEMVQAMVKTWVPMGESGLGLVQSLLGQFGGGLMGGA
AKNGDAGDDKPAKGRKS
>Mature_97_residues
MKIHIEIDCTPEEARRLFGLPDLEPLHDIYLDRVRELMAKGITPEMVQAMVKTWVPMGESGLGLVQSLLGQFGGGLMGGA
AKNGDAGDDKPAKGRKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10462; Mature: 10462

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIHIEIDCTPEEARRLFGLPDLEPLHDIYLDRVRELMAKGITPEMVQAMVKTWVPMGES
CEEEEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
GLGLVQSLLGQFGGGLMGGAAKNGDAGDDKPAKGRKS
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKIHIEIDCTPEEARRLFGLPDLEPLHDIYLDRVRELMAKGITPEMVQAMVKTWVPMGES
CEEEEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
GLGLVQSLLGQFGGGLMGGAAKNGDAGDDKPAKGRKS
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA