Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488065

Identifier: 103488065

GI number: 103488065

Start: 2729875

End: 2730453

Strand: Direct

Name: 103488065

Synonym: Sala_2587

Alternate gene names: NA

Gene position: 2729875-2730453 (Clockwise)

Preceding gene: 103488064

Following gene: 103488066

Centisome position: 81.61

GC content: 61.83

Gene sequence:

>579_bases
TTGGTCCCCGCAAGCCATCTGCGGGAGAAAGGCACCCGCAAGACGGTGCCAGCTTCCCTTGCGGCGCGGGCCACGCCGTG
GGCGCGCGCCCCCGCGCCCACGGCGACACTCTGGCACAAGAGGTTTGTCATCGCCAACGCTCTCGAATGCATGGAAGGAA
GGGTTATGGCTTTCTGCTTGAAGCGCGATGGTTTGTCCCACCGCATCGCCCCGTCACGCCGCTTTGCCACCCTTCTGGTG
GCAATTCCCTTTGCCGGCGTTCTGGTCGGGTGTTCCGGGCCCGAACGAGCCGAGAACTCCGAGGCAACCACGAACACGAA
TGTCTCTGTCCAAATGCCGCCCGCCATTGTGGCAAGCCACACATACAGATGCGTTGGCGGGGACGTCCTCTATGTCGACT
TCCTGGCGGACGAGACATCCATCATTGTCAGGCGTGCGCCTTCTGGCCCTTCGCTCCGATTGACGGCGCCGGCGCAAGGT
CTCGCCTATGTGGGCGAGCGTATGAATCTCACACTCGATGGCAAGGACATCAAATTGGATGAGCCTAAGAAGCCTTCCCA
AGCATGCAAGCGCGCCTGA

Upstream 100 bases:

>100_bases
CGACCGGCTGTTTCAGCGGCACCTCACGCCTGCGCGGCCTCCCTTGCCCAAGAAACGTCCGAGGAAGGGATTTCGGCCTA
ATGCCTGACGGTCCGCAAGT

Downstream 100 bases:

>100_bases
AGCGGACGTCTGGTGTCGACCTGCGCGGGATCCTGATTATGGCCATATCCATGTCGAGGCCTGTTCGGGCGGCATGCCCG
TGGCTCTGGCAGATGCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MVPASHLREKGTRKTVPASLAARATPWARAPAPTATLWHKRFVIANALECMEGRVMAFCLKRDGLSHRIAPSRRFATLLV
AIPFAGVLVGCSGPERAENSEATTNTNVSVQMPPAIVASHTYRCVGGDVLYVDFLADETSIIVRRAPSGPSLRLTAPAQG
LAYVGERMNLTLDGKDIKLDEPKKPSQACKRA

Sequences:

>Translated_192_residues
MVPASHLREKGTRKTVPASLAARATPWARAPAPTATLWHKRFVIANALECMEGRVMAFCLKRDGLSHRIAPSRRFATLLV
AIPFAGVLVGCSGPERAENSEATTNTNVSVQMPPAIVASHTYRCVGGDVLYVDFLADETSIIVRRAPSGPSLRLTAPAQG
LAYVGERMNLTLDGKDIKLDEPKKPSQACKRA
>Mature_192_residues
MVPASHLREKGTRKTVPASLAARATPWARAPAPTATLWHKRFVIANALECMEGRVMAFCLKRDGLSHRIAPSRRFATLLV
AIPFAGVLVGCSGPERAENSEATTNTNVSVQMPPAIVASHTYRCVGGDVLYVDFLADETSIIVRRAPSGPSLRLTAPAQG
LAYVGERMNLTLDGKDIKLDEPKKPSQACKRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20690; Mature: 20690

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPASHLREKGTRKTVPASLAARATPWARAPAPTATLWHKRFVIANALECMEGRVMAFCL
CCCHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEE
KRDGLSHRIAPSRRFATLLVAIPFAGVLVGCSGPERAENSEATTNTNVSVQMPPAIVASH
CCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCEEEEECCHHHHCC
TYRCVGGDVLYVDFLADETSIIVRRAPSGPSLRLTAPAQGLAYVGERMNLTLDGKDIKLD
CEEEECCCEEEEEEECCCCEEEEEECCCCCCEEEECCCCCHHHHCCCEEEEECCCEEECC
EPKKPSQACKRA
CCCCHHHHHHCC
>Mature Secondary Structure
MVPASHLREKGTRKTVPASLAARATPWARAPAPTATLWHKRFVIANALECMEGRVMAFCL
CCCHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEE
KRDGLSHRIAPSRRFATLLVAIPFAGVLVGCSGPERAENSEATTNTNVSVQMPPAIVASH
CCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCEEEEECCHHHHCC
TYRCVGGDVLYVDFLADETSIIVRRAPSGPSLRLTAPAQGLAYVGERMNLTLDGKDIKLD
CEEEECCCEEEEEEECCCCEEEEEECCCCCCEEEECCCCCHHHHCCCEEEEECCCEEECC
EPKKPSQACKRA
CCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA