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The map label for this gene is luxR [H]

Identifier: 103488066

GI number: 103488066

Start: 2731109

End: 2731861

Strand: Direct

Name: luxR [H]

Synonym: Sala_2588

Alternate gene names: 103488066

Gene position: 2731109-2731861 (Clockwise)

Preceding gene: 103488065

Following gene: 103488067

Centisome position: 81.64

GC content: 58.83

Gene sequence:

>753_bases
ATGAGACTTGGTTTGGTGGAGTTACTTGGCGACAGCATATTAACGGCATCCTCGATTGACCATCTGCATGAGGCGTTGAC
GCGCGCGACCCGCGACATGGGTTTCGATCGCTTTGCGCTTTCGCTCGAAATCGGCTGCGGCGCCGACAGCAGTACGTCCC
TTCTGATCCATGATTATCCGGCAAGCTGGGCCGACGTGTATATCGGCTTCAATCTGGCGGCGAGCGATCCGGTTCGCCGC
GCGGCCGAGCGCAGCGTGTTGGGCTTTGGCTGGCGAAATATCCTCGACCTGGTTCCAATGACCGAGATCGAGAAGACCAC
CTTCGAAACCGGACGGCGTCATGGGCTTGCCGATGGGTTCACTGTCCCGCGGCATCTTCCCGGCGATGTTACCGGGTCAT
GCTCGTTCGTTACCGGCCTTGGAAAATCGATCCCACATGCGATGCTGATCGTTGCCGAAATGCTTGGCGCAATGGCAATC
GCCAGCGCAAGGCAGCTTTCAGGATGGACGAGCCGGTCGGTACAGCCAAGATTAACGGATCGGCAGCGCGACTGCGTCCT
TTGGGCCGCGCGCGGAAAGACAGACTGGGAAATCTCGCGAATCCTCGACATCAGCCATGAAACCGTGATCCAGCACCTCA
AGGATGCCCGCGAACGCTACGAGACGCACAAGCGCGCGTCGCTGATCCTTTACGCATTGTACGACGGCCTCATCAGCTTC
GCCGACATTTTTCGCTGGCGGGTTCGAAGCTGA

Upstream 100 bases:

>100_bases
CACCAGACGCAGCGTGAGACAGAGGTTCTGGTGCCCACCAGTTGAAAGGCGGTCCGCGGGGTGCGGGTTGGGAACGCGCT
CGCGGGCGTAGTAGGGGACT

Downstream 100 bases:

>100_bases
CGGTCGAATCCCTCTGGCCCGCGTGCTGTCTCTCCCCATTTCTTGGTATGGGCGGCTCGCGGGCAGCGATGTTCTTTCCT
GCGCGGTATCAACCGCGGAG

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MRLGLVELLGDSILTASSIDHLHEALTRATRDMGFDRFALSLEIGCGADSSTSLLIHDYPASWADVYIGFNLAASDPVRR
AAERSVLGFGWRNILDLVPMTEIEKTTFETGRRHGLADGFTVPRHLPGDVTGSCSFVTGLGKSIPHAMLIVAEMLGAMAI
ASARQLSGWTSRSVQPRLTDRQRDCVLWAARGKTDWEISRILDISHETVIQHLKDARERYETHKRASLILYALYDGLISF
ADIFRWRVRS

Sequences:

>Translated_250_residues
MRLGLVELLGDSILTASSIDHLHEALTRATRDMGFDRFALSLEIGCGADSSTSLLIHDYPASWADVYIGFNLAASDPVRR
AAERSVLGFGWRNILDLVPMTEIEKTTFETGRRHGLADGFTVPRHLPGDVTGSCSFVTGLGKSIPHAMLIVAEMLGAMAI
ASARQLSGWTSRSVQPRLTDRQRDCVLWAARGKTDWEISRILDISHETVIQHLKDARERYETHKRASLILYALYDGLISF
ADIFRWRVRS
>Mature_250_residues
MRLGLVELLGDSILTASSIDHLHEALTRATRDMGFDRFALSLEIGCGADSSTSLLIHDYPASWADVYIGFNLAASDPVRR
AAERSVLGFGWRNILDLVPMTEIEKTTFETGRRHGLADGFTVPRHLPGDVTGSCSFVTGLGKSIPHAMLIVAEMLGAMAI
ASARQLSGWTSRSVQPRLTDRQRDCVLWAARGKTDWEISRILDISHETVIQHLKDARERYETHKRASLILYALYDGLISF
ADIFRWRVRS

Specific function: Transcriptional activator of the bioluminescence operon. Binds to the OHHL autoinducer [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788224, Length=222, Percent_Identity=23.4234234234234, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR005143
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03472 Autoind_bind; PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 27855; Mature: 27855

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLGLVELLGDSILTASSIDHLHEALTRATRDMGFDRFALSLEIGCGADSSTSLLIHDYP
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEECC
ASWADVYIGFNLAASDPVRRAAERSVLGFGWRNILDLVPMTEIEKTTFETGRRHGLADGF
CCCEEEEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC
TVPRHLPGDVTGSCSFVTGLGKSIPHAMLIVAEMLGAMAIASARQLSGWTSRSVQPRLTD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
RQRDCVLWAARGKTDWEISRILDISHETVIQHLKDARERYETHKRASLILYALYDGLISF
CCCCEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADIFRWRVRS
HHHHHHHCCC
>Mature Secondary Structure
MRLGLVELLGDSILTASSIDHLHEALTRATRDMGFDRFALSLEIGCGADSSTSLLIHDYP
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEECC
ASWADVYIGFNLAASDPVRRAAERSVLGFGWRNILDLVPMTEIEKTTFETGRRHGLADGF
CCCEEEEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC
TVPRHLPGDVTGSCSFVTGLGKSIPHAMLIVAEMLGAMAIASARQLSGWTSRSVQPRLTD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
RQRDCVLWAARGKTDWEISRILDISHETVIQHLKDARERYETHKRASLILYALYDGLISF
CCCCEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADIFRWRVRS
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2762291; 3697093 [H]