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The map label for this gene is xerC [H]

Identifier: 103488014

GI number: 103488014

Start: 2674866

End: 2676257

Strand: Direct

Name: xerC [H]

Synonym: Sala_2535

Alternate gene names: 103488014

Gene position: 2674866-2676257 (Clockwise)

Preceding gene: 103488011

Following gene: 103488023

Centisome position: 79.96

GC content: 62.57

Gene sequence:

>1392_bases
ATGGTTCAGGGCACCATTCTTCTGACCAAACGAGTCATCGACGCGGCCGTTTCAAAAGGGAAGCGCTACGACATCTGGGA
TAGCGAGATTCCCGGTTTCGGTCTCCGGGTGGGCGTGAGCGGGACAAAAACGTTCGTGCTCCGATACCGCGCTGAGGGCG
GTGGACGCGGGGCGCCGAAGCGGCACGTCACGGTCGGACGCTTTGGTCCCCTCACTGTCGAGATGGCCCGGCGACAGGCC
AAGCAGCTCCTGGCCAAGGCAACCGTTGGCGAGGATCCGGCCAAGGCGCGAAACGACAAGCGCGGCGAGATGCGGATCAG
CGAACTGATCGATCTCTATGAGAAGCAGGGCTGCTATATCCAGCGCGGGAAACGGCAGGGCGTGCCCATGAAGCCGCGGA
CCAAGCAATATACGCTTGCACGGCTGCGCCATCATGTCGTCCCACTACTCGGCAATCGCCGTGTAACCGAAGTCAACACA
GGCGACATCGAGCGCTTCTTCCGTGACGTAGAGACTGGAAAGACGGCGCGGGACGACAAGATCGGCCCGCGCAAGCGCAT
TGTCGTGCGAGGCGGCGAAGGCGCCGCGCGCAAGGTATTTCGAGACCTGTCCGCCGTATTCAGTTTCGCGCGGCGCAGCG
AGATCGTCACCCGCAACCCTTGCGAGACTGCGGCGGTCAAGAAAACCGACAACCACAAGGAACGCTTCCTCACGCTCGAG
GAGGTCAAGCGCTTCGGCGAAGGCCTGCGCGAGCTGGAGAAGGACGGAACCAACCGCAAGGCGCTCGACATCATGCGCTT
GTGGATGCTGACAGGATGCCGCCGCGAGGAGATTGCGAGCCTCAAATGGCAGGAGGTCGATTTCGAGCATGGCTGCCTGC
GTTTCGGAGATAGCAAGACAGGCAAAGCGGTGCGGCCGATCGGTGCCGCTGCGATCGCCGTGATCAAGACAATCGAGCAG
ACTGGGGATTCCGAGTTCGTTTTTCCCGCTGGGGAAGGTGATAGCTATTTCCGAGGCTACAAGACGCCGTGGAAGAAGGT
CGTCGAGAAGGCTCGGCTACCCGGCGTGACGCCGCATACCTTACGGCATACGATGGGTTCGACGGCGATTTCGTCCGGCG
AAGCGATGGCATTCACTGGGGCGATCCTGGGACATACCAATCCGCGATCAACGGCCATCTATGCGCACGTCCAGCACAGC
CCGGCCCGGCGCGCCGCCGATCGCGTAGCAGAACGGATCGCCGCAGCGCTTGCCGGCATGAGTGACTTGGAAGTCGATGC
CCCGGCTCCCGACGAGGATGAGGAGCTACTCCGCAGAGTGGCCGAAACGCTGATGAAGGGCGGCGCGGAAGCCGACCGCC
TGCGGGTCGTCATCAACGCGCTCGCACCCTGA

Upstream 100 bases:

>100_bases
AATTTCTTACGCTATCCTTGTCTAGAAAAACACGCCGATTTCCGAATGGCGTGGTCGCCCGGTGGTCGCCCAGAATGGGG
TGCCTAACAAGGAGAAAGTG

Downstream 100 bases:

>100_bases
TTAGGCAGCGGGGGCTGATTATTCTTGTGCAGAACCGGTGCAGTGGGCTTTTGTGTGGGATCTGGCTGGCGCCGGCGAGC
ACGGCAGGAATGATGCTCAA

Product: phage integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MVQGTILLTKRVIDAAVSKGKRYDIWDSEIPGFGLRVGVSGTKTFVLRYRAEGGGRGAPKRHVTVGRFGPLTVEMARRQA
KQLLAKATVGEDPAKARNDKRGEMRISELIDLYEKQGCYIQRGKRQGVPMKPRTKQYTLARLRHHVVPLLGNRRVTEVNT
GDIERFFRDVETGKTARDDKIGPRKRIVVRGGEGAARKVFRDLSAVFSFARRSEIVTRNPCETAAVKKTDNHKERFLTLE
EVKRFGEGLRELEKDGTNRKALDIMRLWMLTGCRREEIASLKWQEVDFEHGCLRFGDSKTGKAVRPIGAAAIAVIKTIEQ
TGDSEFVFPAGEGDSYFRGYKTPWKKVVEKARLPGVTPHTLRHTMGSTAISSGEAMAFTGAILGHTNPRSTAIYAHVQHS
PARRAADRVAERIAAALAGMSDLEVDAPAPDEDEELLRRVAETLMKGGAEADRLRVVINALAP

Sequences:

>Translated_463_residues
MVQGTILLTKRVIDAAVSKGKRYDIWDSEIPGFGLRVGVSGTKTFVLRYRAEGGGRGAPKRHVTVGRFGPLTVEMARRQA
KQLLAKATVGEDPAKARNDKRGEMRISELIDLYEKQGCYIQRGKRQGVPMKPRTKQYTLARLRHHVVPLLGNRRVTEVNT
GDIERFFRDVETGKTARDDKIGPRKRIVVRGGEGAARKVFRDLSAVFSFARRSEIVTRNPCETAAVKKTDNHKERFLTLE
EVKRFGEGLRELEKDGTNRKALDIMRLWMLTGCRREEIASLKWQEVDFEHGCLRFGDSKTGKAVRPIGAAAIAVIKTIEQ
TGDSEFVFPAGEGDSYFRGYKTPWKKVVEKARLPGVTPHTLRHTMGSTAISSGEAMAFTGAILGHTNPRSTAIYAHVQHS
PARRAADRVAERIAAALAGMSDLEVDAPAPDEDEELLRRVAETLMKGGAEADRLRVVINALAP
>Mature_463_residues
MVQGTILLTKRVIDAAVSKGKRYDIWDSEIPGFGLRVGVSGTKTFVLRYRAEGGGRGAPKRHVTVGRFGPLTVEMARRQA
KQLLAKATVGEDPAKARNDKRGEMRISELIDLYEKQGCYIQRGKRQGVPMKPRTKQYTLARLRHHVVPLLGNRRVTEVNT
GDIERFFRDVETGKTARDDKIGPRKRIVVRGGEGAARKVFRDLSAVFSFARRSEIVTRNPCETAAVKKTDNHKERFLTLE
EVKRFGEGLRELEKDGTNRKALDIMRLWMLTGCRREEIASLKWQEVDFEHGCLRFGDSKTGKAVRPIGAAAIAVIKTIEQ
TGDSEFVFPAGEGDSYFRGYKTPWKKVVEKARLPGVTPHTLRHTMGSTAISSGEAMAFTGAILGHTNPRSTAIYAHVQHS
PARRAADRVAERIAAALAGMSDLEVDAPAPDEDEELLRRVAETLMKGGAEADRLRVVINALAP

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107
- InterPro:   IPR011931 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 51393; Mature: 51393

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQGTILLTKRVIDAAVSKGKRYDIWDSEIPGFGLRVGVSGTKTFVLRYRAEGGGRGAPK
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCCC
RHVTVGRFGPLTVEMARRQAKQLLAKATVGEDPAKARNDKRGEMRISELIDLYEKQGCYI
CCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCEE
QRGKRQGVPMKPRTKQYTLARLRHHVVPLLGNRRVTEVNTGDIERFFRDVETGKTARDDK
ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCCCC
IGPRKRIVVRGGEGAARKVFRDLSAVFSFARRSEIVTRNPCETAAVKKTDNHKERFLTLE
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHEEHH
EVKRFGEGLRELEKDGTNRKALDIMRLWMLTGCRREEIASLKWQEVDFEHGCLRFGDSKT
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHCCCHHHCCCCCCCEECCCCCC
GKAVRPIGAAAIAVIKTIEQTGDSEFVFPAGEGDSYFRGYKTPWKKVVEKARLPGVTPHT
CCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHCCCCCHHHHHHHHHCCCCCCHHH
LRHTMGSTAISSGEAMAFTGAILGHTNPRSTAIYAHVQHSPARRAADRVAERIAAALAGM
HHHHHCCHHHCCCCCEEEEHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCC
SDLEVDAPAPDEDEELLRRVAETLMKGGAEADRLRVVINALAP
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MVQGTILLTKRVIDAAVSKGKRYDIWDSEIPGFGLRVGVSGTKTFVLRYRAEGGGRGAPK
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCCC
RHVTVGRFGPLTVEMARRQAKQLLAKATVGEDPAKARNDKRGEMRISELIDLYEKQGCYI
CCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCEE
QRGKRQGVPMKPRTKQYTLARLRHHVVPLLGNRRVTEVNTGDIERFFRDVETGKTARDDK
ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCCCC
IGPRKRIVVRGGEGAARKVFRDLSAVFSFARRSEIVTRNPCETAAVKKTDNHKERFLTLE
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHEEHH
EVKRFGEGLRELEKDGTNRKALDIMRLWMLTGCRREEIASLKWQEVDFEHGCLRFGDSKT
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHCCCHHHCCCCCCCEECCCCCC
GKAVRPIGAAAIAVIKTIEQTGDSEFVFPAGEGDSYFRGYKTPWKKVVEKARLPGVTPHT
CCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHCCCCCHHHHHHHHHCCCCCCHHH
LRHTMGSTAISSGEAMAFTGAILGHTNPRSTAIYAHVQHSPARRAADRVAERIAAALAGM
HHHHHCCHHHCCCCCEEEEHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCC
SDLEVDAPAPDEDEELLRRVAETLMKGGAEADRLRVVINALAP
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12235376 [H]