The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

Click here to switch to the map view.

The map label for this gene is 103488002

Identifier: 103488002

GI number: 103488002

Start: 2660297

End: 2660806

Strand: Direct

Name: 103488002

Synonym: Sala_2523

Alternate gene names: NA

Gene position: 2660297-2660806 (Clockwise)

Preceding gene: 103488001

Following gene: 103488003

Centisome position: 79.53

GC content: 60.39

Gene sequence:

>510_bases
ATGGACATCGAGAATGACGACGCCCTTGTGGGCATTGGCAAGAGCCATCGCGTGATCATCTGGGATGGACAGCAGGAGCG
TGAGAAGGAGCTCCACTGGGGCCTGCCGTCTCACAATCCCGACATCTTTCAGATTCCGCTGCTCAAGTCCGAGACCGCGA
TCATCGACCGCCCGTGCCTGCTGCTTGCCAATGAGTTCGGTTTGGTGAAACGGGGACGCACAGTTTATTCGGCGAGCCTC
ATCGGCGAACCTTTCCTATGCATCGCGGCGACCTGGCGCCCCGGGAACCGCGATTGGCCCGACAGTTTCGCGGCGCTCAC
CGTCCCCGCCTATGCCGATCTTGCGCATCATAAGGACCGCCATGTCGGGGTGGTTCATCCTGACGATCTCTTCGACTGGT
TGATGGGAAAGCGTCCACCGCTGGACTTGCTGCGGCCCTTCCCCAAGGATAGCTTCAGGATCACGCCGCCGATCCAGCAG
AATTTCGACGACCTACTCGGAGCGGCCTGA

Upstream 100 bases:

>100_bases
AACTGGTCCAACCGAGCAAGGACGATATTCAATTGCCCATGCCCGACGAACGTGAATGGAAGCGCGCGCTGAGCCGCTTC
CGGGCCTAGGAGACCGTCCG

Downstream 100 bases:

>100_bases
CGGAGGGCCGCCCGATGTGCAACCTGGTGACGCTGAATTCGACGGTCGACGAGGTGGCATCCTATTTTAAATCGCGCCGG
CCGCAGGCCACCAACGCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MDIENDDALVGIGKSHRVIIWDGQQEREKELHWGLPSHNPDIFQIPLLKSETAIIDRPCLLLANEFGLVKRGRTVYSASL
IGEPFLCIAATWRPGNRDWPDSFAALTVPAYADLAHHKDRHVGVVHPDDLFDWLMGKRPPLDLLRPFPKDSFRITPPIQQ
NFDDLLGAA

Sequences:

>Translated_169_residues
MDIENDDALVGIGKSHRVIIWDGQQEREKELHWGLPSHNPDIFQIPLLKSETAIIDRPCLLLANEFGLVKRGRTVYSASL
IGEPFLCIAATWRPGNRDWPDSFAALTVPAYADLAHHKDRHVGVVHPDDLFDWLMGKRPPLDLLRPFPKDSFRITPPIQQ
NFDDLLGAA
>Mature_169_residues
MDIENDDALVGIGKSHRVIIWDGQQEREKELHWGLPSHNPDIFQIPLLKSETAIIDRPCLLLANEFGLVKRGRTVYSASL
IGEPFLCIAATWRPGNRDWPDSFAALTVPAYADLAHHKDRHVGVVHPDDLFDWLMGKRPPLDLLRPFPKDSFRITPPIQQ
NFDDLLGAA

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19106; Mature: 19106

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIENDDALVGIGKSHRVIIWDGQQEREKELHWGLPSHNPDIFQIPLLKSETAIIDRPCL
CCCCCCCEEEEECCCCEEEEECCCHHHHHHHCCCCCCCCCCEEEEECCCCCCEEECCCEE
LLANEFGLVKRGRTVYSASLIGEPFLCIAATWRPGNRDWPDSFAALTVPAYADLAHHKDR
EEECCCCCCCCCCEEEEHHHCCCCEEEEEEEECCCCCCCCCCCEEEECCHHHHHHHCCCC
HVGVVHPDDLFDWLMGKRPPLDLLRPFPKDSFRITPPIQQNFDDLLGAA
EEEEECCHHHHHHHHCCCCCHHHHCCCCCCCEEECCCHHCCHHHHHCCC
>Mature Secondary Structure
MDIENDDALVGIGKSHRVIIWDGQQEREKELHWGLPSHNPDIFQIPLLKSETAIIDRPCL
CCCCCCCEEEEECCCCEEEEECCCHHHHHHHCCCCCCCCCCEEEEECCCCCCEEECCCEE
LLANEFGLVKRGRTVYSASLIGEPFLCIAATWRPGNRDWPDSFAALTVPAYADLAHHKDR
EEECCCCCCCCCCEEEEHHHCCCCEEEEEEEECCCCCCCCCCCEEEECCHHHHHHHCCCC
HVGVVHPDDLFDWLMGKRPPLDLLRPFPKDSFRITPPIQQNFDDLLGAA
EEEEECCHHHHHHHHCCCCCHHHHCCCCCCCEEECCCHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA