Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488001

Identifier: 103488001

GI number: 103488001

Start: 2659736

End: 2659954

Strand: Direct

Name: 103488001

Synonym: Sala_2522

Alternate gene names: NA

Gene position: 2659736-2659954 (Clockwise)

Preceding gene: 103487992

Following gene: 103488002

Centisome position: 79.51

GC content: 63.01

Gene sequence:

>219_bases
TTGTTCTTCCTATGTTCTCATATGGGCATGGACAGAATCGATACCGCCCGAGTCGCAGAAACCCTGCTTGCCGCTCCCGG
CTGGGCGCGCGTGGGCCTCACCGCACCTACAAGTCACATGCGCGTCGAAGCGGCGTTCGAGCTTGCCCGCGTCATCGCCG
AAAGCGTGGGTGGAAGCCCCGAGCCCGCGCATATCGACCAGCTCGGGCTTTCGCTGTGA

Upstream 100 bases:

>100_bases
GCCACGCGGCCCGGCAACCCCCGCGCTCGCTCGCGGCGGCCTGCCGCCGCGGGACCGAGGATCATGGGCGGGCCCAGCCG
TGCGCAGTGGGCTTGCCATG

Downstream 100 bases:

>100_bases
CGTGGGCGGCTGGACCAGAGAAGGTGGGCGGCGCGCAACGCATCTGTTCGAGGCCGCGGCATGGTATCAGGCGGTCAGGC
CGGTGTGCCGCTGCGGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MFFLCSHMGMDRIDTARVAETLLAAPGWARVGLTAPTSHMRVEAAFELARVIAESVGGSPEPAHIDQLGLSL

Sequences:

>Translated_72_residues
MFFLCSHMGMDRIDTARVAETLLAAPGWARVGLTAPTSHMRVEAAFELARVIAESVGGSPEPAHIDQLGLSL
>Mature_72_residues
MFFLCSHMGMDRIDTARVAETLLAAPGWARVGLTAPTSHMRVEAAFELARVIAESVGGSPEPAHIDQLGLSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7678; Mature: 7678

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFLCSHMGMDRIDTARVAETLLAAPGWARVGLTAPTSHMRVEAAFELARVIAESVGGSP
CEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
EPAHIDQLGLSL
CCCCHHHCCCCC
>Mature Secondary Structure
MFFLCSHMGMDRIDTARVAETLLAAPGWARVGLTAPTSHMRVEAAFELARVIAESVGGSP
CEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
EPAHIDQLGLSL
CCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA