| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487944
Identifier: 103487944
GI number: 103487944
Start: 2605806
End: 2606210
Strand: Reverse
Name: 103487944
Synonym: Sala_2465
Alternate gene names: NA
Gene position: 2606210-2605806 (Counterclockwise)
Preceding gene: 103487945
Following gene: 103487943
Centisome position: 77.91
GC content: 61.23
Gene sequence:
>405_bases ATGATCACCATTGACGGCGGAAGCGGTCACTGGCTCGAGAGCCTGTTCCGCCTCGCCGTGGTTATCCTGGAACTGAGCGG CACGGCAACCATCCTGACAGGTGCCGCGCTGGCGACCGCGACGTTTCTCCGTCAGGCCTGTCGAGGCCTCTATGCCGAAG CCTATCGTCCGTTCCGATCGACACTCGGTCGCAGCATATTGCTCGGCCTTGAGTTTCTCGTAGCGGGCGACATCGTGAAA TCACTGGTGATCAACCCTACGCTTAACGACCTCGTCGTGCTCGCGGGCCTCGTGTTTGTTCGTACCTTCCTGAGCATTTC GCTGGGCGTCGAGATCAATGGTCATTGGCCTTGGGAGAATACGCGCATGGAGCGCGCCCGCCTCGACGCGGCGACGGACC GGTGA
Upstream 100 bases:
>100_bases ATGGTTTCGCAGCGCGCCGCAGGCGAGCGGGCGACCGTGGAACAATGCTATGCCTGTCACACGACCGACAGTTTCAACAA TATTCGCAGGAGAGGCTGGT
Downstream 100 bases:
>100_bases CCACCATGCCATCCGACACGCTCAGGCGCATCTTTCCGAGAGGATGGCGGCTTCGGCCGCATGGCTCGATTCAATGGGAG AATTTTCATGCTTGAGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MITIDGGSGHWLESLFRLAVVILELSGTATILTGAALATATFLRQACRGLYAEAYRPFRSTLGRSILLGLEFLVAGDIVK SLVINPTLNDLVVLAGLVFVRTFLSISLGVEINGHWPWENTRMERARLDAATDR
Sequences:
>Translated_134_residues MITIDGGSGHWLESLFRLAVVILELSGTATILTGAALATATFLRQACRGLYAEAYRPFRSTLGRSILLGLEFLVAGDIVK SLVINPTLNDLVVLAGLVFVRTFLSISLGVEINGHWPWENTRMERARLDAATDR >Mature_134_residues MITIDGGSGHWLESLFRLAVVILELSGTATILTGAALATATFLRQACRGLYAEAYRPFRSTLGRSILLGLEFLVAGDIVK SLVINPTLNDLVVLAGLVFVRTFLSISLGVEINGHWPWENTRMERARLDAATDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14615; Mature: 14615
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITIDGGSGHWLESLFRLAVVILELSGTATILTGAALATATFLRQACRGLYAEAYRPFRS CEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLGRSILLGLEFLVAGDIVKSLVINPTLNDLVVLAGLVFVRTFLSISLGVEINGHWPWEN HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCC TRMERARLDAATDR CHHHHHHHHCCCCC >Mature Secondary Structure MITIDGGSGHWLESLFRLAVVILELSGTATILTGAALATATFLRQACRGLYAEAYRPFRS CEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLGRSILLGLEFLVAGDIVKSLVINPTLNDLVVLAGLVFVRTFLSISLGVEINGHWPWEN HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCC TRMERARLDAATDR CHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA