Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487943

Identifier: 103487943

GI number: 103487943

Start: 2605278

End: 2605625

Strand: Reverse

Name: 103487943

Synonym: Sala_2464

Alternate gene names: NA

Gene position: 2605625-2605278 (Counterclockwise)

Preceding gene: 103487944

Following gene: 103487942

Centisome position: 77.89

GC content: 61.49

Gene sequence:

>348_bases
ATGCCCGACTCCCATGCAATGCCGCTTGCCGATTGCGCGGCGTTGTGCCTGGAAACGCATCGAAGCTGCATCGAAGCCGC
GCGCCATTGCCTAGAAGAGGGCGGCGACAAGGCCGCTCCGGGGATCATGGCTATTCTCGCCGATTGCGCCGGGATTTGCC
TCACGACCGCTCAATCGCTGCTTCGCAATTCTCCGGCTCATGGGATCCTTTGCCAGACCTGCGAGCAGATCTGCCGATTG
TGCGCGGAAAACTGCGCTGCATTCACGGGTGACGCACAGCTGTTGCGCTGCGCGAACTTATGCCGCCGCTGTGCCGAGGG
GTGCGGCATGATGGTCATGTCTTCATAG

Upstream 100 bases:

>100_bases
AATTTTCATGCTTGAGAGGCGATCGATCCTGGGGACCGGGCTTGCCCTGACAATGCTCGTCGGCGCCGCGCGCGCCGAAG
ATCCACCGCCCGGCGGGGGA

Downstream 100 bases:

>100_bases
CAGCACGTGGCGTTCCGATTTTCTTCGGGCGAGAGATCAACATGTGGGCTTCACGTATTTCGATCCGGACGTTCGGTGCA
GCATATCGAGCACAGCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MPDSHAMPLADCAALCLETHRSCIEAARHCLEEGGDKAAPGIMAILADCAGICLTTAQSLLRNSPAHGILCQTCEQICRL
CAENCAAFTGDAQLLRCANLCRRCAEGCGMMVMSS

Sequences:

>Translated_115_residues
MPDSHAMPLADCAALCLETHRSCIEAARHCLEEGGDKAAPGIMAILADCAGICLTTAQSLLRNSPAHGILCQTCEQICRL
CAENCAAFTGDAQLLRCANLCRRCAEGCGMMVMSS
>Mature_114_residues
PDSHAMPLADCAALCLETHRSCIEAARHCLEEGGDKAAPGIMAILADCAGICLTTAQSLLRNSPAHGILCQTCEQICRLC
AENCAAFTGDAQLLRCANLCRRCAEGCGMMVMSS

Specific function: Unknown

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12076; Mature: 11945

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

13.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
18.3 %Cys+Met (Translated Protein)
13.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
17.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDSHAMPLADCAALCLETHRSCIEAARHCLEEGGDKAAPGIMAILADCAGICLTTAQSL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LRNSPAHGILCQTCEQICRLCAENCAAFTGDAQLLRCANLCRRCAEGCGMMVMSS
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure 
PDSHAMPLADCAALCLETHRSCIEAARHCLEEGGDKAAPGIMAILADCAGICLTTAQSL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LRNSPAHGILCQTCEQICRLCAENCAAFTGDAQLLRCANLCRRCAEGCGMMVMSS
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA