Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487945

Identifier: 103487945

GI number: 103487945

Start: 2606197

End: 2606910

Strand: Reverse

Name: 103487945

Synonym: Sala_2466

Alternate gene names: NA

Gene position: 2606910-2606197 (Counterclockwise)

Preceding gene: 103487946

Following gene: 103487944

Centisome position: 77.93

GC content: 64.57

Gene sequence:

>714_bases
ATGATGCGCCACTGGCTGCTTCCGGCCCTTTTTGCGACCAGCCTGCTCGTCGTGCTGCTTGGGCTACCGGCGCTGTCGCG
GTCGAACGCGCCGCCTCAGGCCGGCGTGGTCGCGCAGCTCGTTTCGCCGGGCCCCCTGTCCGAAGCCCACCGCAGCCTCG
CAGGATCGTGCCGAAACTGCCACACCCCCATCGCTGGTGTGACGGGGGAGACTTGCAAGAGTTGTCATGCCGCGACCGAC
TTCGGAAACAAGCAATCGACCCAATTCCATGCCTCGGCCTTGCAATGCACCTCATGCCACGTCGAGCATGCGGGCAGACA
GAGCCTCATTCGCATGGATCACAAGGCCCTGTTCAAGCCGGGAATATGGTCGCAGCGCCCCGCCGCCGCGACCGCCGGCG
GCGCGGTGACAGGCGTGCTCGCCTGTGCTGGTTGCCATTCCATTCGCGACCCGCACCTGGGCCTCTTCGGAACGCGCTGC
GCGAGTTGCCACGCGACCGACAGCTGGCGCATCGACGGCTACCGGCATCCCTCGACCAATTCCCGGAACTGCTCCGAATG
CCACCGGGCGCCGCCGAGCCACTATATGGAGCATTTCAGCATGGTTTCGCAGCGCGCCGCAGGCGAGCGGGCGACCGTGG
AACAATGCTATGCCTGTCACACGACCGACAGTTTCAACAATATTCGCAGGAGAGGCTGGTATGATCACCATTGA

Upstream 100 bases:

>100_bases
TCGCACGCTGGCGATGGTTTCATATCGTGGCCGGTTCGCTGCTTTACGCGCTCGTGATTCTCCATATCGCGGCCGCGGTC
TATTTTGGTCTTCGCTGGCC

Downstream 100 bases:

>100_bases
CGGCGGAAGCGGTCACTGGCTCGAGAGCCTGTTCCGCCTCGCCGTGGTTATCCTGGAACTGAGCGGCACGGCAACCATCC
TGACAGGTGCCGCGCTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MMRHWLLPALFATSLLVVLLGLPALSRSNAPPQAGVVAQLVSPGPLSEAHRSLAGSCRNCHTPIAGVTGETCKSCHAATD
FGNKQSTQFHASALQCTSCHVEHAGRQSLIRMDHKALFKPGIWSQRPAAATAGGAVTGVLACAGCHSIRDPHLGLFGTRC
ASCHATDSWRIDGYRHPSTNSRNCSECHRAPPSHYMEHFSMVSQRAAGERATVEQCYACHTTDSFNNIRRRGWYDHH

Sequences:

>Translated_237_residues
MMRHWLLPALFATSLLVVLLGLPALSRSNAPPQAGVVAQLVSPGPLSEAHRSLAGSCRNCHTPIAGVTGETCKSCHAATD
FGNKQSTQFHASALQCTSCHVEHAGRQSLIRMDHKALFKPGIWSQRPAAATAGGAVTGVLACAGCHSIRDPHLGLFGTRC
ASCHATDSWRIDGYRHPSTNSRNCSECHRAPPSHYMEHFSMVSQRAAGERATVEQCYACHTTDSFNNIRRRGWYDHH
>Mature_237_residues
MMRHWLLPALFATSLLVVLLGLPALSRSNAPPQAGVVAQLVSPGPLSEAHRSLAGSCRNCHTPIAGVTGETCKSCHAATD
FGNKQSTQFHASALQCTSCHVEHAGRQSLIRMDHKALFKPGIWSQRPAAATAGGAVTGVLACAGCHSIRDPHLGLFGTRC
ASCHATDSWRIDGYRHPSTNSRNCSECHRAPPSHYMEHFSMVSQRAAGERATVEQCYACHTTDSFNNIRRRGWYDHH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25676; Mature: 25676

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
5.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRHWLLPALFATSLLVVLLGLPALSRSNAPPQAGVVAQLVSPGPLSEAHRSLAGSCRNC
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHC
HTPIAGVTGETCKSCHAATDFGNKQSTQFHASALQCTSCHVEHAGRQSLIRMDHKALFKP
CCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GIWSQRPAAATAGGAVTGVLACAGCHSIRDPHLGLFGTRCASCHATDSWRIDGYRHPSTN
CCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCEECCCCC
SRNCSECHRAPPSHYMEHFSMVSQRAAGERATVEQCYACHTTDSFNNIRRRGWYDHH
CCCHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MMRHWLLPALFATSLLVVLLGLPALSRSNAPPQAGVVAQLVSPGPLSEAHRSLAGSCRNC
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHC
HTPIAGVTGETCKSCHAATDFGNKQSTQFHASALQCTSCHVEHAGRQSLIRMDHKALFKP
CCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GIWSQRPAAATAGGAVTGVLACAGCHSIRDPHLGLFGTRCASCHATDSWRIDGYRHPSTN
CCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCEECCCCC
SRNCSECHRAPPSHYMEHFSMVSQRAAGERATVEQCYACHTTDSFNNIRRRGWYDHH
CCCHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA