| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487942
Identifier: 103487942
GI number: 103487942
Start: 2604787
End: 2605236
Strand: Reverse
Name: 103487942
Synonym: Sala_2463
Alternate gene names: NA
Gene position: 2605236-2604787 (Counterclockwise)
Preceding gene: 103487943
Following gene: 103487941
Centisome position: 77.88
GC content: 60.89
Gene sequence:
>450_bases ATGTGGGCTTCACGTATTTCGATCCGGACGTTCGGTGCAGCATATCGAGCACAGCGGCGCCGATCCGACTTGGTGTCGAT ACAAAGCAAAGATTTCGAATGGAGACACATCATGCGCAAGATTTCCCCTGTTCTGACGGTCCTTGGCCTCCTCGCCCTGA CCCAGATGCCGGTCCTCGCCGACGAGAGCAAAGGGCCGCCGAAGAAGCCGGCCGCCACCGCGCCGGCCCAGAAGCCCGGC GACGAGCATCGCCACGGCATGGACCACGGCGGACAGCAGATGCACGACAAGATGATGAAAGATCACCGCGAGGGCATGGA AAAGATGCAGGATCAGTCCGGCGGTGGATGCGGCGGCAACGACAAGCCCATGCCTGCCATGGGCGGCATGGGGACGTCCA AGCCTGCGGACAAACCGAAAGACATGCCGATGAAGCACGAGCATATGTGA
Upstream 100 bases:
>100_bases GCGCGAACTTATGCCGCCGCTGTGCCGAGGGGTGCGGCATGATGGTCATGTCTTCATAGCAGCACGTGGCGTTCCGATTT TCTTCGGGCGAGAGATCAAC
Downstream 100 bases:
>100_bases GCATCGGTCGGTCCATCCCCCCGGAAGCCCGCTGCCCCCGTGGCAGCGGGCTTTTTGTCTGAAAAGCTCAAATGTTCCCG TGAAGATTTTCGGTCCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MWASRISIRTFGAAYRAQRRRSDLVSIQSKDFEWRHIMRKISPVLTVLGLLALTQMPVLADESKGPPKKPAATAPAQKPG DEHRHGMDHGGQQMHDKMMKDHREGMEKMQDQSGGGCGGNDKPMPAMGGMGTSKPADKPKDMPMKHEHM
Sequences:
>Translated_149_residues MWASRISIRTFGAAYRAQRRRSDLVSIQSKDFEWRHIMRKISPVLTVLGLLALTQMPVLADESKGPPKKPAATAPAQKPG DEHRHGMDHGGQQMHDKMMKDHREGMEKMQDQSGGGCGGNDKPMPAMGGMGTSKPADKPKDMPMKHEHM >Mature_149_residues MWASRISIRTFGAAYRAQRRRSDLVSIQSKDFEWRHIMRKISPVLTVLGLLALTQMPVLADESKGPPKKPAATAPAQKPG DEHRHGMDHGGQQMHDKMMKDHREGMEKMQDQSGGGCGGNDKPMPAMGGMGTSKPADKPKDMPMKHEHM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16527; Mature: 16527
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 10.1 %Met (Translated Protein) 10.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 10.1 %Met (Mature Protein) 10.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWASRISIRTFGAAYRAQRRRSDLVSIQSKDFEWRHIMRKISPVLTVLGLLALTQMPVLA CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC DESKGPPKKPAATAPAQKPGDEHRHGMDHGGQQMHDKMMKDHREGMEKMQDQSGGGCGGN CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DKPMPAMGGMGTSKPADKPKDMPMKHEHM CCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MWASRISIRTFGAAYRAQRRRSDLVSIQSKDFEWRHIMRKISPVLTVLGLLALTQMPVLA CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC DESKGPPKKPAATAPAQKPGDEHRHGMDHGGQQMHDKMMKDHREGMEKMQDQSGGGCGGN CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DKPMPAMGGMGTSKPADKPKDMPMKHEHM CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA