Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487632

Identifier: 103487632

GI number: 103487632

Start: 2261505

End: 2263064

Strand: Reverse

Name: 103487632

Synonym: Sala_2151

Alternate gene names: NA

Gene position: 2263064-2261505 (Counterclockwise)

Preceding gene: 103487633

Following gene: 103487631

Centisome position: 67.65

GC content: 60.9

Gene sequence:

>1560_bases
ATGGGCGCTTTGACCGCCAGCGTCGGCCGATACCCGGTCGCCGGGATATGTATCACACTGATCGCGATCATGACTTTCTG
GAGCGGCAACCAGCTCCGTTTGGGGTTTGAAAGCGTCTGGCCCACGATGGTCGGCGCTATTGTCATCGCCGCAATCGTCA
CTGCATTTTTCCGGGCGATTTGCGGCGACTGGGCACGTGCCGGTATGGCTTGCGGCATAACGGCAGTCTATTTTTTCTAT
GTTCCAAGGTTGCTGGCGCTGCTGCCGCTGCCGTTTCCGATGGCCGCCGCCCTGCACCTCGCGGCGATTGCCGCGCTTGT
CGCGCTTTACCGGACGTTCCCGTCGGACGGGACCAGGCTCAGGGACGTTGCCGGTCGCCTTAACCTTCTTGCCGCCCTGT
TGGTTGTCGTCAATGCCGTGCCGCTGGCCGTGCAGCAGTTTCGGCTTGAATCCGCGCGCGCACCGGCGCAGCGAAGCTTA
AGCGAACTCGACGGCAAAGCGATGCCTGACGGTCCCGACGTCTGGCACATTCTTTTCGATCGCTATGCCGCGAACGACAC
GTTCAAGGCGCATTACGGGTTCGATAACCAGCCGTTCATCGATGCGCTTCGACAGCGCGGATTTGTCGTTCCCGATCGGG
CTTATGCAAATTATCAGCGGACCAGCCATTCGATTGCATCGACGATGAACGGCACGCTCCTTGATCCGATGGCGCGCAAG
ATGTCCGGCGGCGATCAGGGCGACTGGGTTCCCATCTATCGGGCCGCGCGCAACGGGTCGGCTATCCGCCAGTTCAATGC
GTTCGGCTACAAGACCATTTTTGCGGGAAGCTGGTGGGAACCCACACGCTTCAGTTCCGCGGCGCAGGAGTCCGTCACGA
TCCGGGCGGTGCCCCAACTTGCCCGTCTCGCTATCGACCAGTCGGCGGTCGGGTTCTGGCTCGGCGATCTGGGCCTGCCT
TATTTCGATGGTCGCGGCGATCAATGTTACCGCGCAAACGAGAAATTTCGCCGGTTGGGCGAGATCGCCCGCGACGGATC
GCCAAAACATGTCTTCGCCCATTTTTTGGTTCCGCATCCGCCGTTCGTGCTGAATGCCGACGGAAGTTGTCGCGATCTGG
AAACCGCGCGCCGGCGGACGCGATCGGAAAATTATGTCGACCAGGTCCGTTTCACCAACCGCGAAGTCTTGAAGCTCGTC
GACCGGATTCTGGCGGGATCGCGGCCGGCGGTCATCGTCATCCACAGCGACGAAGGGCCTTGGCCGACCCCCTATGTCGG
CAACGAACACGGCCTTGGAACCGATCCGGTCCCCGTGCCCTGGACCAAATTGTCCGGCAGCCAGTTGAGCGAGAAAATGG
GGATACTGCTTGCCGTTCGCGATCCTTCCGGGAAAGCGCCTGCGACAATGCCCGAATCGCCGGTCCAGATTTACCCGGCC
GTCCTGCGCGATCATTTCGGATCGTCGCGGCCGCTGCCCGCGTCCCGCTATTATATGTTCAAAGGGGATCGCGCATTGTA
CGAATTTGAAGAGGTCGGCGATAGGCTTCTGGCCAGATAG

Upstream 100 bases:

>100_bases
CTTTCTCCGGCAGGTACAAGCGCGCGGACGGATTGTCCGCCAGGATCGCATCGGCGATGGCGGGCGCCTGATCGTTACTT
ACGACCGGCGCGGTTAGGCG

Downstream 100 bases:

>100_bases
CACCCCGCGCCCCGGTTGGGGTGGGCGGATTTATCCCTTCATTAACCTTGTTGTGGCACGTCGGCGAAGCGGACGGATCG
GGAACGGCGGTTCCGTCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 519; Mature: 518

Protein sequence:

>519_residues
MGALTASVGRYPVAGICITLIAIMTFWSGNQLRLGFESVWPTMVGAIVIAAIVTAFFRAICGDWARAGMACGITAVYFFY
VPRLLALLPLPFPMAAALHLAAIAALVALYRTFPSDGTRLRDVAGRLNLLAALLVVVNAVPLAVQQFRLESARAPAQRSL
SELDGKAMPDGPDVWHILFDRYAANDTFKAHYGFDNQPFIDALRQRGFVVPDRAYANYQRTSHSIASTMNGTLLDPMARK
MSGGDQGDWVPIYRAARNGSAIRQFNAFGYKTIFAGSWWEPTRFSSAAQESVTIRAVPQLARLAIDQSAVGFWLGDLGLP
YFDGRGDQCYRANEKFRRLGEIARDGSPKHVFAHFLVPHPPFVLNADGSCRDLETARRRTRSENYVDQVRFTNREVLKLV
DRILAGSRPAVIVIHSDEGPWPTPYVGNEHGLGTDPVPVPWTKLSGSQLSEKMGILLAVRDPSGKAPATMPESPVQIYPA
VLRDHFGSSRPLPASRYYMFKGDRALYEFEEVGDRLLAR

Sequences:

>Translated_519_residues
MGALTASVGRYPVAGICITLIAIMTFWSGNQLRLGFESVWPTMVGAIVIAAIVTAFFRAICGDWARAGMACGITAVYFFY
VPRLLALLPLPFPMAAALHLAAIAALVALYRTFPSDGTRLRDVAGRLNLLAALLVVVNAVPLAVQQFRLESARAPAQRSL
SELDGKAMPDGPDVWHILFDRYAANDTFKAHYGFDNQPFIDALRQRGFVVPDRAYANYQRTSHSIASTMNGTLLDPMARK
MSGGDQGDWVPIYRAARNGSAIRQFNAFGYKTIFAGSWWEPTRFSSAAQESVTIRAVPQLARLAIDQSAVGFWLGDLGLP
YFDGRGDQCYRANEKFRRLGEIARDGSPKHVFAHFLVPHPPFVLNADGSCRDLETARRRTRSENYVDQVRFTNREVLKLV
DRILAGSRPAVIVIHSDEGPWPTPYVGNEHGLGTDPVPVPWTKLSGSQLSEKMGILLAVRDPSGKAPATMPESPVQIYPA
VLRDHFGSSRPLPASRYYMFKGDRALYEFEEVGDRLLAR
>Mature_518_residues
GALTASVGRYPVAGICITLIAIMTFWSGNQLRLGFESVWPTMVGAIVIAAIVTAFFRAICGDWARAGMACGITAVYFFYV
PRLLALLPLPFPMAAALHLAAIAALVALYRTFPSDGTRLRDVAGRLNLLAALLVVVNAVPLAVQQFRLESARAPAQRSLS
ELDGKAMPDGPDVWHILFDRYAANDTFKAHYGFDNQPFIDALRQRGFVVPDRAYANYQRTSHSIASTMNGTLLDPMARKM
SGGDQGDWVPIYRAARNGSAIRQFNAFGYKTIFAGSWWEPTRFSSAAQESVTIRAVPQLARLAIDQSAVGFWLGDLGLPY
FDGRGDQCYRANEKFRRLGEIARDGSPKHVFAHFLVPHPPFVLNADGSCRDLETARRRTRSENYVDQVRFTNREVLKLVD
RILAGSRPAVIVIHSDEGPWPTPYVGNEHGLGTDPVPVPWTKLSGSQLSEKMGILLAVRDPSGKAPATMPESPVQIYPAV
LRDHFGSSRPLPASRYYMFKGDRALYEFEEVGDRLLAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57267; Mature: 57136

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGALTASVGRYPVAGICITLIAIMTFWSGNQLRLGFESVWPTMVGAIVIAAIVTAFFRAI
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
CGDWARAGMACGITAVYFFYVPRLLALLPLPFPMAAALHLAAIAALVALYRTFPSDGTRL
HHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH
RDVAGRLNLLAALLVVVNAVPLAVQQFRLESARAPAQRSLSELDGKAMPDGPDVWHILFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHH
RYAANDTFKAHYGFDNQPFIDALRQRGFVVPDRAYANYQRTSHSIASTMNGTLLDPMARK
HHHCCCCEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
MSGGDQGDWVPIYRAARNGSAIRQFNAFGYKTIFAGSWWEPTRFSSAAQESVTIRAVPQL
HCCCCCCCCCHHHHHHCCCCHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCEEEHHHHHH
ARLAIDQSAVGFWLGDLGLPYFDGRGDQCYRANEKFRRLGEIARDGSPKHVFAHFLVPHP
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
PFVLNADGSCRDLETARRRTRSENYVDQVRFTNREVLKLVDRILAGSRPAVIVIHSDEGP
CEEEECCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCC
WPTPYVGNEHGLGTDPVPVPWTKLSGSQLSEKMGILLAVRDPSGKAPATMPESPVQIYPA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHH
VLRDHFGSSRPLPASRYYMFKGDRALYEFEEVGDRLLAR
HHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GALTASVGRYPVAGICITLIAIMTFWSGNQLRLGFESVWPTMVGAIVIAAIVTAFFRAI
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
CGDWARAGMACGITAVYFFYVPRLLALLPLPFPMAAALHLAAIAALVALYRTFPSDGTRL
HHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH
RDVAGRLNLLAALLVVVNAVPLAVQQFRLESARAPAQRSLSELDGKAMPDGPDVWHILFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHH
RYAANDTFKAHYGFDNQPFIDALRQRGFVVPDRAYANYQRTSHSIASTMNGTLLDPMARK
HHHCCCCEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
MSGGDQGDWVPIYRAARNGSAIRQFNAFGYKTIFAGSWWEPTRFSSAAQESVTIRAVPQL
HCCCCCCCCCHHHHHHCCCCHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCEEEHHHHHH
ARLAIDQSAVGFWLGDLGLPYFDGRGDQCYRANEKFRRLGEIARDGSPKHVFAHFLVPHP
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
PFVLNADGSCRDLETARRRTRSENYVDQVRFTNREVLKLVDRILAGSRPAVIVIHSDEGP
CEEEECCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCC
WPTPYVGNEHGLGTDPVPVPWTKLSGSQLSEKMGILLAVRDPSGKAPATMPESPVQIYPA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHH
VLRDHFGSSRPLPASRYYMFKGDRALYEFEEVGDRLLAR
HHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA