Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487631

Identifier: 103487631

GI number: 103487631

Start: 2260412

End: 2261452

Strand: Reverse

Name: 103487631

Synonym: Sala_2150

Alternate gene names: NA

Gene position: 2261452-2260412 (Counterclockwise)

Preceding gene: 103487632

Following gene: 103487627

Centisome position: 67.6

GC content: 57.93

Gene sequence:

>1041_bases
GTGGCACGTCGGCGAAGCGGACGGATCGGGAACGGCGGTTCCGTCGCGGAACCGGCTTTCTGCTTATGGGTGATTCATGC
GATCCAGCCTACGTGCCATTCCGCCCGAAATTCTCGTCACCGGCGCCGCGCTCGCGGTGATGTGGCTTTTTTGATCGCAT
TGGACCTCCCCATCGTCCTGCCGTCGGGTAATCGTGCCGCCTTTGTCGGGGTGCACTATATCTATCCGCTGATCGGCGTG
GCGCTACTCGGTCTTGCAACATTTGCGGCAGGCAAGCGCGAGGTTTCAACCAGCTTTTTGGTCGCTCTGCCCTGCTATGT
CATGGTCCTGATTGCGCACTTCAACATCAAGCTTTGGATACCGCACATCAATCCAGTGATGTACGATGATTTCTACTGGA
AGACGGACCAGATGGTCCGTCCGTTGATCGACGCGTGCATCCATATGCGCGAGAATCTGTTCGGATTCATCCGCTTTGAA
TCCAACTTCTACATGCTGTCGTTCATTGGCCTGTTTTATACCAGTTTCCTTTATCACGCGATCAGGACGCCGACACATTT
CAGGACGCTGGTCGTGGCGGTTCTGCTCATGCAATCGCTTGGTGCGCTGTCCTATCTGGTTGCACCGGCGATAGGCCCGT
TCATCTATGAAGCGGGGATCGATCCCACGATTACGCCGGGTCAGCTCAGCATGCTCGAATTCTATCGTCAGTCGGTGTCG
CAAGGGTCGGCGTGGATCGCGCAACACGGCAGCACCCACTTTACCGTCGGACTGGCGGCGATGCCGTCGCTGCACGCGGC
GGGAGCATTTCTTTTCTGGCTCTTTGCGTGGAAACACGGCCGGATCCTGTTGCCGCTCTATTCGATCCTCCTGTTCTTCA
TCCTCGTCACGTCGATTGCCAGTCGTTGGCATTATGCCATCGACATTCCGGTCGGAATCGCACTCGCCTGGGGATGCGTC
TGGCTGGCAGAGCGTTTCGTTCGCACCGCGAACGACGGGCAGGCGGTCCCGGCGATCACGACCGTGCCAGCGACGACCTG
A

Upstream 100 bases:

>100_bases
GCATTGTACGAATTTGAAGAGGTCGGCGATAGGCTTCTGGCCAGATAGCACCCCGCGCCCCGGTTGGGGTGGGCGGATTT
ATCCCTTCATTAACCTTGTT

Downstream 100 bases:

>100_bases
CTGGAATAGCCCAACTATGGCCGACTGTGGCGCATTTACGTGCCCAGGTCGACCTGATGGGCGAGCGCCCATTGCTCATA
CTGCCCGCGCGGGTCCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MARRRSGRIGNGGSVAEPAFCLWVIHAIQPTCHSARNSRHRRRARGDVAFLIALDLPIVLPSGNRAAFVGVHYIYPLIGV
ALLGLATFAAGKREVSTSFLVALPCYVMVLIAHFNIKLWIPHINPVMYDDFYWKTDQMVRPLIDACIHMRENLFGFIRFE
SNFYMLSFIGLFYTSFLYHAIRTPTHFRTLVVAVLLMQSLGALSYLVAPAIGPFIYEAGIDPTITPGQLSMLEFYRQSVS
QGSAWIAQHGSTHFTVGLAAMPSLHAAGAFLFWLFAWKHGRILLPLYSILLFFILVTSIASRWHYAIDIPVGIALAWGCV
WLAERFVRTANDGQAVPAITTVPATT

Sequences:

>Translated_346_residues
MARRRSGRIGNGGSVAEPAFCLWVIHAIQPTCHSARNSRHRRRARGDVAFLIALDLPIVLPSGNRAAFVGVHYIYPLIGV
ALLGLATFAAGKREVSTSFLVALPCYVMVLIAHFNIKLWIPHINPVMYDDFYWKTDQMVRPLIDACIHMRENLFGFIRFE
SNFYMLSFIGLFYTSFLYHAIRTPTHFRTLVVAVLLMQSLGALSYLVAPAIGPFIYEAGIDPTITPGQLSMLEFYRQSVS
QGSAWIAQHGSTHFTVGLAAMPSLHAAGAFLFWLFAWKHGRILLPLYSILLFFILVTSIASRWHYAIDIPVGIALAWGCV
WLAERFVRTANDGQAVPAITTVPATT
>Mature_345_residues
ARRRSGRIGNGGSVAEPAFCLWVIHAIQPTCHSARNSRHRRRARGDVAFLIALDLPIVLPSGNRAAFVGVHYIYPLIGVA
LLGLATFAAGKREVSTSFLVALPCYVMVLIAHFNIKLWIPHINPVMYDDFYWKTDQMVRPLIDACIHMRENLFGFIRFES
NFYMLSFIGLFYTSFLYHAIRTPTHFRTLVVAVLLMQSLGALSYLVAPAIGPFIYEAGIDPTITPGQLSMLEFYRQSVSQ
GSAWIAQHGSTHFTVGLAAMPSLHAAGAFLFWLFAWKHGRILLPLYSILLFFILVTSIASRWHYAIDIPVGIALAWGCVW
LAERFVRTANDGQAVPAITTVPATT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38557; Mature: 38426

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRRSGRIGNGGSVAEPAFCLWVIHAIQPTCHSARNSRHRRRARGDVAFLIALDLPIVL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEEEEEECCEEEE
PSGNRAAFVGVHYIYPLIGVALLGLATFAAGKREVSTSFLVALPCYVMVLIAHFNIKLWI
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEE
PHINPVMYDDFYWKTDQMVRPLIDACIHMRENLFGFIRFESNFYMLSFIGLFYTSFLYHA
CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHH
IRTPTHFRTLVVAVLLMQSLGALSYLVAPAIGPFIYEAGIDPTITPGQLSMLEFYRQSVS
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
QGSAWIAQHGSTHFTVGLAAMPSLHAAGAFLFWLFAWKHGRILLPLYSILLFFILVTSIA
CCCHHHHHCCCCEEEEEHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
SRWHYAIDIPVGIALAWGCVWLAERFVRTANDGQAVPAITTVPATT
HCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCC
>Mature Secondary Structure 
ARRRSGRIGNGGSVAEPAFCLWVIHAIQPTCHSARNSRHRRRARGDVAFLIALDLPIVL
CCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEEEEEECCEEEE
PSGNRAAFVGVHYIYPLIGVALLGLATFAAGKREVSTSFLVALPCYVMVLIAHFNIKLWI
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEE
PHINPVMYDDFYWKTDQMVRPLIDACIHMRENLFGFIRFESNFYMLSFIGLFYTSFLYHA
CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHH
IRTPTHFRTLVVAVLLMQSLGALSYLVAPAIGPFIYEAGIDPTITPGQLSMLEFYRQSVS
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
QGSAWIAQHGSTHFTVGLAAMPSLHAAGAFLFWLFAWKHGRILLPLYSILLFFILVTSIA
CCCHHHHHCCCCEEEEEHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
SRWHYAIDIPVGIALAWGCVWLAERFVRTANDGQAVPAITTVPATT
HCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA