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The map label for this gene is noeA [H]

Identifier: 103487633

GI number: 103487633

Start: 2263068

End: 2264453

Strand: Reverse

Name: noeA [H]

Synonym: Sala_2152

Alternate gene names: 103487633

Gene position: 2264453-2263068 (Counterclockwise)

Preceding gene: 103487634

Following gene: 103487632

Centisome position: 67.69

GC content: 61.18

Gene sequence:

>1386_bases
ATGCAATTCGACCCCGGATCATTCCGCGACCCTTCGGGCCGCGTGCTTCGCCACGAGGGTCGTGTCCTGCGCGCAATCTT
CCCGGCGGGGGCATCGCAATTCGGCGCCGCCAAGGACAGTGGTGTTCTTGATGAGATGATCGGCGATGGCTGGCTGCTTC
CGGCAAATATGGTGATCGATGACGACCTCGCCGAATTGGCACCCGGTGCGGTCCACTGGCTCGAACATCCCGTTCTGGAC
TTCGTATCCTACCCCTATGAGTGGTGCTTTGCGGCGCTGAAAGCTGCGGCGCTCCACCATCTGGATTTCCATATTGCGTT
GCTCGGACGCGGCTTCACGTTGTCCGATGCCACGGCCTATAATATCCAGTTTCGCGGCACCAGGCCGGTCTTCATCGACC
ATCTCTCGATCATTCCCTATGAGGAGGGAACGGCATGGGCCGGACAGCGGCAATTCGGGATGCAGTTCCTCAATCCGCTC
TACCTGTGGGCGAAAAAGGGTATCGCCCCCAACGCCTGGTATCGCGGGTCGCTGGAAGGCATCGAACCTGAACAGCTCGC
AAAGCTCCTGGGGTTTCGGGACCGACTTTCATTCACCGTGATGGCGCATATTGTCGGCCCCGCCGCCTTCGCGCGTCGCC
GCGTCGCCGAAGGGCTGGAAACGAAGGCCCGTCATGTCGCACATCTGCCCGAGCGGCGGTTGATCGCGATGCTGGCAAGC
CTTCGCGACTATATCGCCAGTCTTGCGCTGCCAGCGGAGAAGACCGTCTGGGACGATTACGCATCCAACAACAGCTATGA
CGAAGCCCGCCGCAGCGCGAAGCATCAATTCGTCGCGGACGCGGTCGGCAAGGCTGCGCCGGGCATGCTGTTCGACATCG
GTTGCAACAGCGGGGATTTCAGTCAGACGTCGATCAACGCAGGAGCGCGATCTGTCGTGGGATTCGACTTCGACTTTGGC
GCGCTTGAACGTGCCTTTGCTCGCTTCGATCGATCGGGTGCGCCCGTTCTGCCCTTGTGGCTCGACGCCACCAACCCCAG
CCCGGCTCAAGGCTGGGCGGCGGCCGAACGGAAAAGCATGCAGGACCGGTCCGACGCCGACATGATGCTGGCGCTGGCCG
TAATCCATCATCTGGCGATCGCAAAAAATATTCCGCTTGATATGGCTGTCGACTGGTTGATGGGGCTGGCATCGGTCGGT
GTCATCGAATTTCCGTCGAAGTCCGACCCCATGGTGGTGCAACTGTTGCGGCACCGCCCCGACATTTTTCCGGACTATAC
CGAAGAGGCCTTTCTCCGGCAGGTACAAGCGCGCGGACGGATTGTCCGCCAGGATCGCATCGGCGATGGCGGGCGCCTGA
TCGTTACTTACGACCGGCGCGGTTAG

Upstream 100 bases:

>100_bases
TGCAGGCAGTAACGGGCGCGATCGCCAGCGTCTTGCTGTTCGGCAAAATCTACTGGTCAAAGCTGAAAAGCATCTTCAAG
CGCCAGCAGGACTGACCTCC

Downstream 100 bases:

>100_bases
GCGATGGGCGCTTTGACCGCCAGCGTCGGCCGATACCCGGTCGCCGGGATATGTATCACACTGATCGCGATCATGACTTT
CTGGAGCGGCAACCAGCTCC

Product: NoeA host specific nodulation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MQFDPGSFRDPSGRVLRHEGRVLRAIFPAGASQFGAAKDSGVLDEMIGDGWLLPANMVIDDDLAELAPGAVHWLEHPVLD
FVSYPYEWCFAALKAAALHHLDFHIALLGRGFTLSDATAYNIQFRGTRPVFIDHLSIIPYEEGTAWAGQRQFGMQFLNPL
YLWAKKGIAPNAWYRGSLEGIEPEQLAKLLGFRDRLSFTVMAHIVGPAAFARRRVAEGLETKARHVAHLPERRLIAMLAS
LRDYIASLALPAEKTVWDDYASNNSYDEARRSAKHQFVADAVGKAAPGMLFDIGCNSGDFSQTSINAGARSVVGFDFDFG
ALERAFARFDRSGAPVLPLWLDATNPSPAQGWAAAERKSMQDRSDADMMLALAVIHHLAIAKNIPLDMAVDWLMGLASVG
VIEFPSKSDPMVVQLLRHRPDIFPDYTEEAFLRQVQARGRIVRQDRIGDGGRLIVTYDRRG

Sequences:

>Translated_461_residues
MQFDPGSFRDPSGRVLRHEGRVLRAIFPAGASQFGAAKDSGVLDEMIGDGWLLPANMVIDDDLAELAPGAVHWLEHPVLD
FVSYPYEWCFAALKAAALHHLDFHIALLGRGFTLSDATAYNIQFRGTRPVFIDHLSIIPYEEGTAWAGQRQFGMQFLNPL
YLWAKKGIAPNAWYRGSLEGIEPEQLAKLLGFRDRLSFTVMAHIVGPAAFARRRVAEGLETKARHVAHLPERRLIAMLAS
LRDYIASLALPAEKTVWDDYASNNSYDEARRSAKHQFVADAVGKAAPGMLFDIGCNSGDFSQTSINAGARSVVGFDFDFG
ALERAFARFDRSGAPVLPLWLDATNPSPAQGWAAAERKSMQDRSDADMMLALAVIHHLAIAKNIPLDMAVDWLMGLASVG
VIEFPSKSDPMVVQLLRHRPDIFPDYTEEAFLRQVQARGRIVRQDRIGDGGRLIVTYDRRG
>Mature_461_residues
MQFDPGSFRDPSGRVLRHEGRVLRAIFPAGASQFGAAKDSGVLDEMIGDGWLLPANMVIDDDLAELAPGAVHWLEHPVLD
FVSYPYEWCFAALKAAALHHLDFHIALLGRGFTLSDATAYNIQFRGTRPVFIDHLSIIPYEEGTAWAGQRQFGMQFLNPL
YLWAKKGIAPNAWYRGSLEGIEPEQLAKLLGFRDRLSFTVMAHIVGPAAFARRRVAEGLETKARHVAHLPERRLIAMLAS
LRDYIASLALPAEKTVWDDYASNNSYDEARRSAKHQFVADAVGKAAPGMLFDIGCNSGDFSQTSINAGARSVVGFDFDFG
ALERAFARFDRSGAPVLPLWLDATNPSPAQGWAAAERKSMQDRSDADMMLALAVIHHLAIAKNIPLDMAVDWLMGLASVG
VIEFPSKSDPMVVQLLRHRPDIFPDYTEEAFLRQVQARGRIVRQDRIGDGGRLIVTYDRRG

Specific function: Not known; does not seem to participate in nod factor synthesis but required for nodulation on some specific Medicago species such as M.littoralis [H]

COG id: COG2264

COG function: function code J; Ribosomal protein L11 methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002877 [H]

Pfam domain/function: PF01728 FtsJ [H]

EC number: NA

Molecular weight: Translated: 51044; Mature: 51044

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFDPGSFRDPSGRVLRHEGRVLRAIFPAGASQFGAAKDSGVLDEMIGDGWLLPANMVID
CCCCCCCCCCCCCCEECCCCCEEEEEECCCCHHCCCCCCCCHHHHHHCCCEEECCCEEEC
DDLAELAPGAVHWLEHPVLDFVSYPYEWCFAALKAAALHHLDFHIALLGRGFTLSDATAY
CCHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEEEECCCEECCCEEE
NIQFRGTRPVFIDHLSIIPYEEGTAWAGQRQFGMQFLNPLYLWAKKGIAPNAWYRGSLEG
EEEECCCCCEEEECEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCC
IEPEQLAKLLGFRDRLSFTVMAHIVGPAAFARRRVAEGLETKARHVAHLPERRLIAMLAS
CCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LRDYIASLALPAEKTVWDDYASNNSYDEARRSAKHQFVADAVGKAAPGMLFDIGCNSGDF
HHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC
SQTSINAGARSVVGFDFDFGALERAFARFDRSGAPVLPLWLDATNPSPAQGWAAAERKSM
CCHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHH
QDRSDADMMLALAVIHHLAIAKNIPLDMAVDWLMGLASVGVIEFPSKSDPMVVQLLRHRP
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHCC
DIFPDYTEEAFLRQVQARGRIVRQDRIGDGGRLIVTYDRRG
CCCCCCHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCC
>Mature Secondary Structure
MQFDPGSFRDPSGRVLRHEGRVLRAIFPAGASQFGAAKDSGVLDEMIGDGWLLPANMVID
CCCCCCCCCCCCCCEECCCCCEEEEEECCCCHHCCCCCCCCHHHHHHCCCEEECCCEEEC
DDLAELAPGAVHWLEHPVLDFVSYPYEWCFAALKAAALHHLDFHIALLGRGFTLSDATAY
CCHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEEEECCCEECCCEEE
NIQFRGTRPVFIDHLSIIPYEEGTAWAGQRQFGMQFLNPLYLWAKKGIAPNAWYRGSLEG
EEEECCCCCEEEECEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCC
IEPEQLAKLLGFRDRLSFTVMAHIVGPAAFARRRVAEGLETKARHVAHLPERRLIAMLAS
CCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LRDYIASLALPAEKTVWDDYASNNSYDEARRSAKHQFVADAVGKAAPGMLFDIGCNSGDF
HHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC
SQTSINAGARSVVGFDFDFGALERAFARFDRSGAPVLPLWLDATNPSPAQGWAAAERKSM
CCHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHH
QDRSDADMMLALAVIHHLAIAKNIPLDMAVDWLMGLASVGVIEFPSKSDPMVVQLLRHRP
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHCC
DIFPDYTEEAFLRQVQARGRIVRQDRIGDGGRLIVTYDRRG
CCCCCCHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8801423; 11481432 [H]