Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is ubiG [H]

Identifier: 103487624

GI number: 103487624

Start: 2250165

End: 2250983

Strand: Reverse

Name: ubiG [H]

Synonym: Sala_2143

Alternate gene names: 103487624

Gene position: 2250983-2250165 (Counterclockwise)

Preceding gene: 103487626

Following gene: 103487616

Centisome position: 67.29

GC content: 67.64

Gene sequence:

>819_bases
ATGACTGCCGCCACGATCAACCCGCACGAAGCCGCCCATTTCGGTGCGCTCGCCGCCGACTGGTGGGATCCGCGCGGATC
GTCGGCGATGCTGCACAGGCTGAACCCGGTGCGGCTGGCCTATATCCGCGAGCAGATCGATGGCCATTGGCACGTCGATG
CGCGTGAGCGCCATCCGCTCGCGGGCAAGCACGTGCTCGATGTCGGCTGCGGCGCCGGGCTGCTGTGCGAGCCGCTCGCG
CGGATGGGCGCGAAGGTCATCGGCATCGATGCCGCGCCGGAAAATATCGCGGCGGCAAAGGATCATGCGGCGGGGCAGGG
GCTGGCGATCAGCTATTTCGCCGGTGAGCTGGCTGACCTCCCGAATCCGTTCGTGTCGAGCGAAGTCGAGACACTCTTGG
GGAGCGCCGACCTTCGGGGTGTCTCGACTTCGCTCGACACGAACGGGGAGGGGAAGGGTCAGTTCGACCTCGTCACCTCG
ATGGAGGTGATCGAGCATGTCGTCGATCCTGCCGTCTTCGTCGCCGAACTCGCGGCGCGCCTCGCGCCCGGCGGGCTGAT
GATCCTGTCGACGCCGAACCGCACGATCGCCTCGAAACTGCTGCTCGTCGAGGCCGCCGAACGGATCGGCGCGGTGCCGC
GCGGGACGCACGACTGGGACCGGTTTCTAAAGCCGGAGGAGCTGACGAAACTGCTCGAAGGCGCGGGGCTGGAGGTTATC
GACCGCACCGGCCTGGCGCCGTCACCGGCGCGGGGCTTCAAGCTCGGCGGCAGCGAGGCGCTCAACTATCTGATGACCGC
GCGCTGGCCGGATAGATAG

Upstream 100 bases:

>100_bases
CGCGTCGTTACGGAAGGGGAAGGGCGATGGCAAGCGCGAGAAACTGTGCGCCGGATAGAATTTCTTGCACCGGCGATGCC
GCGGTGCCACATCACAGCCC

Downstream 100 bases:

>100_bases
GACGCGCGCCCGAGGATGGTCATTGCGAGCGCAGCGAAGCAATCTCCCGCGCAAGGATCAAGGGCTGGATTTTGCCGCGT
TGCCTTCGGGCCCCCGCAAT

Product: 3-demethylubiquinone-9 3-methyltransferase

Products: NA

Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MTAATINPHEAAHFGALAADWWDPRGSSAMLHRLNPVRLAYIREQIDGHWHVDARERHPLAGKHVLDVGCGAGLLCEPLA
RMGAKVIGIDAAPENIAAAKDHAAGQGLAISYFAGELADLPNPFVSSEVETLLGSADLRGVSTSLDTNGEGKGQFDLVTS
MEVIEHVVDPAVFVAELAARLAPGGLMILSTPNRTIASKLLLVEAAERIGAVPRGTHDWDRFLKPEELTKLLEGAGLEVI
DRTGLAPSPARGFKLGGSEALNYLMTARWPDR

Sequences:

>Translated_272_residues
MTAATINPHEAAHFGALAADWWDPRGSSAMLHRLNPVRLAYIREQIDGHWHVDARERHPLAGKHVLDVGCGAGLLCEPLA
RMGAKVIGIDAAPENIAAAKDHAAGQGLAISYFAGELADLPNPFVSSEVETLLGSADLRGVSTSLDTNGEGKGQFDLVTS
MEVIEHVVDPAVFVAELAARLAPGGLMILSTPNRTIASKLLLVEAAERIGAVPRGTHDWDRFLKPEELTKLLEGAGLEVI
DRTGLAPSPARGFKLGGSEALNYLMTARWPDR
>Mature_271_residues
TAATINPHEAAHFGALAADWWDPRGSSAMLHRLNPVRLAYIREQIDGHWHVDARERHPLAGKHVLDVGCGAGLLCEPLAR
MGAKVIGIDAAPENIAAAKDHAAGQGLAISYFAGELADLPNPFVSSEVETLLGSADLRGVSTSLDTNGEGKGQFDLVTSM
EVIEHVVDPAVFVAELAARLAPGGLMILSTPNRTIASKLLLVEAAERIGAVPRGTHDWDRFLKPEELTKLLEGAGLEVID
RTGLAPSPARGFKLGGSEALNYLMTARWPDR

Specific function: Ubiquinone biosynthesis. [C]

COG id: COG2227

COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]

Homologues:

Organism=Homo sapiens, GI118600965, Length=268, Percent_Identity=34.7014925373134, Blast_Score=149, Evalue=2e-36,
Organism=Escherichia coli, GI1788564, Length=266, Percent_Identity=37.218045112782, Blast_Score=149, Evalue=3e-37,
Organism=Caenorhabditis elegans, GI115533050, Length=245, Percent_Identity=33.8775510204082, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI281365311, Length=235, Percent_Identity=31.4893617021277, Blast_Score=111, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24585589, Length=228, Percent_Identity=32.4561403508772, Blast_Score=110, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216
- InterPro:   IPR010233 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: =2.1.1.64 [H]

Molecular weight: Translated: 28981; Mature: 28850

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAATINPHEAAHFGALAADWWDPRGSSAMLHRLNPVRLAYIREQIDGHWHVDARERHPL
CCCCCCCCHHHHHHCCHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCEEECCCCCCCC
AGKHVLDVGCGAGLLCEPLARMGAKVIGIDAAPENIAAAKDHAAGQGLAISYFAGELADL
CCCEEEECCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCCEEEEHHHHHHHHC
PNPFVSSEVETLLGSADLRGVSTSLDTNGEGKGQFDLVTSMEVIEHVVDPAVFVAELAAR
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHH
LAPGGLMILSTPNRTIASKLLLVEAAERIGAVPRGTHDWDRFLKPEELTKLLEGAGLEVI
HCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHCCCCEEE
DRTGLAPSPARGFKLGGSEALNYLMTARWPDR
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TAATINPHEAAHFGALAADWWDPRGSSAMLHRLNPVRLAYIREQIDGHWHVDARERHPL
CCCCCCCHHHHHHCCHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCEEECCCCCCCC
AGKHVLDVGCGAGLLCEPLARMGAKVIGIDAAPENIAAAKDHAAGQGLAISYFAGELADL
CCCEEEECCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCCEEEEHHHHHHHHC
PNPFVSSEVETLLGSADLRGVSTSLDTNGEGKGQFDLVTSMEVIEHVVDPAVFVAELAAR
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHH
LAPGGLMILSTPNRTIASKLLLVEAAERIGAVPRGTHDWDRFLKPEELTKLLEGAGLEVI
HCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHCCCCEEE
DRTGLAPSPARGFKLGGSEALNYLMTARWPDR
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]