The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is yjgR [H]

Identifier: 103487505

GI number: 103487505

Start: 2132342

End: 2134015

Strand: Reverse

Name: yjgR [H]

Synonym: Sala_2022

Alternate gene names: 103487505

Gene position: 2134015-2132342 (Counterclockwise)

Preceding gene: 103487506

Following gene: 103487504

Centisome position: 63.79

GC content: 65.53

Gene sequence:

>1674_bases
ATGGCGCGGGTTTGCAGATTGCTTGTGCGCCGACGCCGTTCTAACCGTTGCAGCGGGTTATCCAGCGGAGGATGGCGAGT
GAGCGAAGGCAGCGCGGCGAGCGAAATCTATATCGGCCTCGGCGGCGGCGGGGCGCCCGAGGGGCCGCGGCAGTCGCTGG
TGCTGAAGCGCGCGAACCGGCACGGGCTGATCGCCGGCGCAACGGGGACCGGCAAGACGGTGACGTTGCAGGGGTTGGCC
GAAGGCTTTTCGGCAGTGGGTGTGCCGGTCTTCGTCGCCGACGTGAAAGGCGACCTTGCCGGCATGGCGATGGCGGGAAG
CCCGACCGCCAGGGTTCACGAGCCCTTTTCGAAGCGTGCCGCCGAAATCGGTGACACCGACTGGGCCTATCGCGACAATC
CCGTGATCTTCTGGGACCTGTTCGGCGAACAGGGGCATCCGGTGCGCACGACGATCTCCGAAATGGGGCCGCTGCTGCTT
GCGCGGCTGATGGGGCTCAACGAGACGCAGGAAGGGGTGCTCGCGATTGCGTTTAGGGTAGCTGACGAGCAGAATATGTT
GCTGCTCGACCTGGGCGATTTGCAGGCGATGCTCGTCTGGTGCGCCGAAAATGCCGATGAGCTGACAGCGAAATATGGCA
ATGTCACCAAGGCGAGCGTCGGGGCGATCCAGCGGCAGCTGCTGACGCTCGAAAGCCAGGGCGGCGATCATTTCTTCGGC
GAACCCGCGCTCGACATTCAGGACATGATCCGTACCGACGAGAATGGCCGCGGCTATGTGAACATCCTTGCCGCCGACAG
GCTGATGGCGAGCCCCAAGCTCTATGCGACCTTTCTCCTCTGGCTGCTGAGCGAGATGTTCGAGACGCTGCCCGAGGTCG
GCGATCCCGACAAGCCGAAGCTGGTTTTCTTCTTCGACGAGGCGCATCTGCTGTTCGACGATGCCCCGCCCGCGCTCACC
GACAAGATTGAACAGGTCGTGCGCCTGATCCGCTCGAAAGGGGTCGGCGTCTATTTCGTCACGCAAAACCCGATCGACAT
TCCCGAGGCGGTCGCGGGTCAGCTGGGCAATCGCGTCCAGCACGCGCTGCGCGCCTTTACCCCGCGTGATCAGAAGGCGG
TGAAGGCCGCCGCGGACACCTTTCGCCCCAATCCGAAGATCGATGTGGCGCGTGAGATCACCGAGCTGCGCGTTGGCGAG
GCGCTGGTGTCGCTGCTGATGCCCGATGGCGCCCCGTCGCCGGTCGAGCGCACATTGATCAAGCCGCCTTGCTCGCGCGC
GGGGCCGCTCGATGCCAAGGAACGCGCGATCATCCGGTCGATCTCGCCGGTCGAGGGCAAATATGACACGGCGGTCGACC
GCGAAAGCGCCGAGGAACTGCTCGCCGTCAAGGCCGAGCAGGCGCAGGCGGCCGCGATCGAGGCGAAGGCGCAGGAGGAG
GCCGACAAGGCGGCCGCGATCGCGGCGAAGGAAGAGGCGAAGCGCAAGGCGGCCGAGGAGCGCGAGCGCATCCGGCTGGA
AAAAGCGGCGGCACGCGAGGCAGCGAAACCGAGCATGGCCGAAAAGATGGTGCAGTCGGCGGCGCGTTCGGCGGCGACGA
GTCTCGGGCGCCAGGTTGCGGGCCGACTGGGCGGTCAGCTGATGCGCGGGATTTTGGGAAGCCTGTTCAAATAG

Upstream 100 bases:

>100_bases
CTGCTCCTCGCGGCGCTGGCACACGGCGCGGCATAAGTCGCACCGCGCCTGTCGGGCAATGAAAGGCCCCGCCGGAGCGA
TCCGGCGGGGCCTTTTGTGT

Downstream 100 bases:

>100_bases
GCCGTCGACTCCGCGACCGATTCGCGGCAGTTTTGGTTGCATGACAAAACCTATATTGCCCGGAGAGGTCGCCGCCGCGG
TCGTCAATCCCGCCGCCTAT

Product: protein of unknown function DUF853, NPT hydrolase putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 557; Mature: 556

Protein sequence:

>557_residues
MARVCRLLVRRRRSNRCSGLSSGGWRVSEGSAASEIYIGLGGGGAPEGPRQSLVLKRANRHGLIAGATGTGKTVTLQGLA
EGFSAVGVPVFVADVKGDLAGMAMAGSPTARVHEPFSKRAAEIGDTDWAYRDNPVIFWDLFGEQGHPVRTTISEMGPLLL
ARLMGLNETQEGVLAIAFRVADEQNMLLLDLGDLQAMLVWCAENADELTAKYGNVTKASVGAIQRQLLTLESQGGDHFFG
EPALDIQDMIRTDENGRGYVNILAADRLMASPKLYATFLLWLLSEMFETLPEVGDPDKPKLVFFFDEAHLLFDDAPPALT
DKIEQVVRLIRSKGVGVYFVTQNPIDIPEAVAGQLGNRVQHALRAFTPRDQKAVKAAADTFRPNPKIDVAREITELRVGE
ALVSLLMPDGAPSPVERTLIKPPCSRAGPLDAKERAIIRSISPVEGKYDTAVDRESAEELLAVKAEQAQAAAIEAKAQEE
ADKAAAIAAKEEAKRKAAEERERIRLEKAAAREAAKPSMAEKMVQSAARSAATSLGRQVAGRLGGQLMRGILGSLFK

Sequences:

>Translated_557_residues
MARVCRLLVRRRRSNRCSGLSSGGWRVSEGSAASEIYIGLGGGGAPEGPRQSLVLKRANRHGLIAGATGTGKTVTLQGLA
EGFSAVGVPVFVADVKGDLAGMAMAGSPTARVHEPFSKRAAEIGDTDWAYRDNPVIFWDLFGEQGHPVRTTISEMGPLLL
ARLMGLNETQEGVLAIAFRVADEQNMLLLDLGDLQAMLVWCAENADELTAKYGNVTKASVGAIQRQLLTLESQGGDHFFG
EPALDIQDMIRTDENGRGYVNILAADRLMASPKLYATFLLWLLSEMFETLPEVGDPDKPKLVFFFDEAHLLFDDAPPALT
DKIEQVVRLIRSKGVGVYFVTQNPIDIPEAVAGQLGNRVQHALRAFTPRDQKAVKAAADTFRPNPKIDVAREITELRVGE
ALVSLLMPDGAPSPVERTLIKPPCSRAGPLDAKERAIIRSISPVEGKYDTAVDRESAEELLAVKAEQAQAAAIEAKAQEE
ADKAAAIAAKEEAKRKAAEERERIRLEKAAAREAAKPSMAEKMVQSAARSAATSLGRQVAGRLGGQLMRGILGSLFK
>Mature_556_residues
ARVCRLLVRRRRSNRCSGLSSGGWRVSEGSAASEIYIGLGGGGAPEGPRQSLVLKRANRHGLIAGATGTGKTVTLQGLAE
GFSAVGVPVFVADVKGDLAGMAMAGSPTARVHEPFSKRAAEIGDTDWAYRDNPVIFWDLFGEQGHPVRTTISEMGPLLLA
RLMGLNETQEGVLAIAFRVADEQNMLLLDLGDLQAMLVWCAENADELTAKYGNVTKASVGAIQRQLLTLESQGGDHFFGE
PALDIQDMIRTDENGRGYVNILAADRLMASPKLYATFLLWLLSEMFETLPEVGDPDKPKLVFFFDEAHLLFDDAPPALTD
KIEQVVRLIRSKGVGVYFVTQNPIDIPEAVAGQLGNRVQHALRAFTPRDQKAVKAAADTFRPNPKIDVAREITELRVGEA
LVSLLMPDGAPSPVERTLIKPPCSRAGPLDAKERAIIRSISPVEGKYDTAVDRESAEELLAVKAEQAQAAAIEAKAQEEA
DKAAAIAAKEEAKRKAAEERERIRLEKAAAREAAKPSMAEKMVQSAARSAATSLGRQVAGRLGGQLMRGILGSLFK

Specific function: Unknown

COG id: COG0433

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjiB [H]

Homologues:

Organism=Escherichia coli, GI1790714, Length=501, Percent_Identity=55.2894211576846, Blast_Score=509, Evalue=1e-145,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008571 [H]

Pfam domain/function: PF05872 DUF853 [H]

EC number: NA

Molecular weight: Translated: 59994; Mature: 59863

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARVCRLLVRRRRSNRCSGLSSGGWRVSEGSAASEIYIGLGGGGAPEGPRQSLVLKRANR
CHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCC
HGLIAGATGTGKTVTLQGLAEGFSAVGVPVFVADVKGDLAGMAMAGSPTARVHEPFSKRA
CCEEEECCCCCCEEEHHHHHHHHHHCCCEEEEEECCCCHHCEEECCCCCHHHCCCHHHHH
AEIGDTDWAYRDNPVIFWDLFGEQGHPVRTTISEMGPLLLARLMGLNETQEGVLAIAFRV
HHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
ADEQNMLLLDLGDLQAMLVWCAENADELTAKYGNVTKASVGAIQRQLLTLESQGGDHFFG
CCCCCEEEEECCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC
EPALDIQDMIRTDENGRGYVNILAADRLMASPKLYATFLLWLLSEMFETLPEVGDPDKPK
CCCCCHHHHHHCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCE
LVFFFDEAHLLFDDAPPALTDKIEQVVRLIRSKGVGVYFVTQNPIDIPEAVAGQLGNRVQ
EEEEECCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHH
HALRAFTPRDQKAVKAAADTFRPNPKIDVAREITELRVGEALVSLLMPDGAPSPVERTLI
HHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHC
KPPCSRAGPLDAKERAIIRSISPVEGKYDTAVDRESAEELLAVKAEQAQAAAIEAKAQEE
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADKAAAIAAKEEAKRKAAEERERIRLEKAAAREAAKPSMAEKMVQSAARSAATSLGRQVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
GRLGGQLMRGILGSLFK
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ARVCRLLVRRRRSNRCSGLSSGGWRVSEGSAASEIYIGLGGGGAPEGPRQSLVLKRANR
HHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCC
HGLIAGATGTGKTVTLQGLAEGFSAVGVPVFVADVKGDLAGMAMAGSPTARVHEPFSKRA
CCEEEECCCCCCEEEHHHHHHHHHHCCCEEEEEECCCCHHCEEECCCCCHHHCCCHHHHH
AEIGDTDWAYRDNPVIFWDLFGEQGHPVRTTISEMGPLLLARLMGLNETQEGVLAIAFRV
HHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
ADEQNMLLLDLGDLQAMLVWCAENADELTAKYGNVTKASVGAIQRQLLTLESQGGDHFFG
CCCCCEEEEECCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC
EPALDIQDMIRTDENGRGYVNILAADRLMASPKLYATFLLWLLSEMFETLPEVGDPDKPK
CCCCCHHHHHHCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCE
LVFFFDEAHLLFDDAPPALTDKIEQVVRLIRSKGVGVYFVTQNPIDIPEAVAGQLGNRVQ
EEEEECCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHH
HALRAFTPRDQKAVKAAADTFRPNPKIDVAREITELRVGEALVSLLMPDGAPSPVERTLI
HHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHC
KPPCSRAGPLDAKERAIIRSISPVEGKYDTAVDRESAEELLAVKAEQAQAAAIEAKAQEE
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADKAAAIAAKEEAKRKAAEERERIRLEKAAAREAAKPSMAEKMVQSAARSAATSLGRQVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
GRLGGQLMRGILGSLFK
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]