| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is hppA [H]
Identifier: 103487506
GI number: 103487506
Start: 2134080
End: 2136194
Strand: Reverse
Name: hppA [H]
Synonym: Sala_2023
Alternate gene names: 103487506
Gene position: 2136194-2134080 (Counterclockwise)
Preceding gene: 103487507
Following gene: 103487505
Centisome position: 63.86
GC content: 64.92
Gene sequence:
>2115_bases ATGAATCCGGTTTTGATCGCGATAGCGTGCGGCCTGTTGGCCGTACTCTATGGATTCATTACCTCGCGGCAGGTGCTCAG CGCCTCCGCCGGTAATGAGAAGATGCAGGAAATCGCTGGCGCCATCCAGGAAGGCGCCAAGGCGTATCTGGGCCGCCAGT ATCGCACCATCGCCGTCGTCGGCGTTGTTGTCGCCGTGCTTGTCGGGGTCTTCCTCGGCCCGATTTCGGCGACGGGTTTC GTCATCGGCGCCGTGCTGTCGGGTGTGGCCGGCTATATCGGCATGAACATTTCGGTCCGCGCGAACGTGCGCACCGCGGC GGCAGCGCAGACGGGGCTGCAGGCGGGCCTGACCATGGCGTTTCGCGCCGGCGCGATCACCGGAATGCTGGTGGCGGGTC TCGCGCTGCTCGCGATCTCGGTCTTCTTCTGGTATCTCACGGGCCCAGGCGGCTTTTCCGTCGGCGGCGATGACCGCACC GTGGTCGATGCGCTCGTCGCGCTGGCGTTCGGCGCGTCGCTCATCTCGATCTTCGCGCGTCTTGGCGGCGGCATCTTCAC CAAGGCCGCCGACGTCGGCGCCGACCTCGTCGGCAAGGTGGAGGCCGGGATCCCCGAGGACGATCCGCGCAACCCCGCGG TGATCGCCGACAATGTCGGCGACAATGTCGGCGACTGCGCCGGCATGGCCGCGGACCTTTTCGAAACCTATGTCGTCACC GTCGGCGCCACGATGGTGCTGATCGCACTGCTGCTGAAGGGCGCGGGCGACATGCTGCTCCCGCTGATGACGCTGCCGCT GCTGATGGGCGGCGTGTGCATCATCACCTCGATCATCGGCACCTATTTCGTGCGTCTCGGCAGCGGGACCAATGTGATGG GCGCGATGTACAAGGGCTTCCTCGTCACCGCGATCCTGTCGATCCCGGCGATCTGGTTCGCGACCCAATATGCGCTCGGC GACATGAATGCGGAGATTGCGGGCACCGGCTTCAACGGCCGCGCGCTCTTCTATTGTTCGCTGCTTGGCCTGGTCATCAC CGGGCTGATCATCTGGATCACCGAATATTATACCGGCACCAATTACCGCCCGGTGCGCAGCATCGCCAAGGCGTCGGAAA CGGGCCACGGCACCAATGTGATTCAGGGCCTTGCCGTCAGCCTGGAATCGACCGCGCTGCCGACGCTCGTCATCTGCGTC GGCATCATTGTCGCCTATCAGGTCGCGGGTATCATCGGCATCGCCTTTGGCGCCACCGCGATGCTCGCGCTCGCGGGCAT GGTCGTCGCGCTCGACGCCTATGGTCCCGTCACCGACAATGCCGGCGGCATTGCCGAGATGGCGGGGCTCGATGACAGCG TGCGCGAGAAGACCGACCTGCTCGATGCCGTGGGCAACACGACCAAGGCGGTGACCAAAGGCTATGCCATCGGTTCGGCG GGTCTGGCGGCGCTGGTGCTGTTCGGCACCTACACCGCCGACATTACCGAATATTCGGCGGAACTCGGCCTCGATGCGCC GCTGACCTTCTCGCTGTCGTCGCCCTATGTCATCGTCGGGCTGCTGCTCGGTGCGCTCCTGCCCTATCTCTTCGGGGCGA TGGGCATGACCGCGGTGGGCCGCGCGGCGGGTGACGTGGTCAAGGATGTTCGCGACCAGTTCGCGAACAACAAGGGCATC ATGGATGGCACCAGTCGCCCCGATTATGCCCGCACGGTCGACCTGGTGACCAAGGCGGCGATCAAGGAAATGATCGTTCC GTCGCTGCTGCCGGTGCTTGCGCCGATCGTCGTCTATTTCGTCATCCTGTGGGTCGCGGGTCCGGCCGCTGCGCTCGAAG CGCTCGGCGCGCTGCTGCTCGGCGTGATCGTCGGGGGGCTGTTCGTTGCCATATCGATGACCTCGGGCGGTGGCGCGTGG GACAATGCCAAGAAATATATCGAGGACGGCAACCACGGCGGCAAGGGCAGCGAAGCCCACAAGGCGGCCGTCACCGGCGA TACCGTTGGCGATCCGTACAAGGATACCGCGGGCCCGGCAGTGAACCCGATGATCAAGATCACCAATATCGTGGCGATCC TGCTCCTCGCGGCGCTGGCACACGGCGCGGCATAA
Upstream 100 bases:
>100_bases GCGGTCGCATCAGGGGAGAGAGCGAACCGGCAACAATAGTCGGACGTGCTCGACTGCTATCTTCTGCGTCGCCCTTCTCA TGGGGAAGGAAGCAACACGC
Downstream 100 bases:
>100_bases GTCGCACCGCGCCTGTCGGGCAATGAAAGGCCCCGCCGGAGCGATCCGGCGGGGCCTTTTGTGTATGGCGCGGGTTTGCA GATTGCTTGTGCGCCGACGC
Product: membrane-bound proton-translocating pyrophosphatase
Products: NA
Alternate protein names: Membrane-bound proton-translocating pyrophosphatase; Pyrophosphate-energized inorganic pyrophosphatase; H(+)-PPase [H]
Number of amino acids: Translated: 704; Mature: 704
Protein sequence:
>704_residues MNPVLIAIACGLLAVLYGFITSRQVLSASAGNEKMQEIAGAIQEGAKAYLGRQYRTIAVVGVVVAVLVGVFLGPISATGF VIGAVLSGVAGYIGMNISVRANVRTAAAAQTGLQAGLTMAFRAGAITGMLVAGLALLAISVFFWYLTGPGGFSVGGDDRT VVDALVALAFGASLISIFARLGGGIFTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYVVT VGATMVLIALLLKGAGDMLLPLMTLPLLMGGVCIITSIIGTYFVRLGSGTNVMGAMYKGFLVTAILSIPAIWFATQYALG DMNAEIAGTGFNGRALFYCSLLGLVITGLIIWITEYYTGTNYRPVRSIAKASETGHGTNVIQGLAVSLESTALPTLVICV GIIVAYQVAGIIGIAFGATAMLALAGMVVALDAYGPVTDNAGGIAEMAGLDDSVREKTDLLDAVGNTTKAVTKGYAIGSA GLAALVLFGTYTADITEYSAELGLDAPLTFSLSSPYVIVGLLLGALLPYLFGAMGMTAVGRAAGDVVKDVRDQFANNKGI MDGTSRPDYARTVDLVTKAAIKEMIVPSLLPVLAPIVVYFVILWVAGPAAALEALGALLLGVIVGGLFVAISMTSGGGAW DNAKKYIEDGNHGGKGSEAHKAAVTGDTVGDPYKDTAGPAVNPMIKITNIVAILLLAALAHGAA
Sequences:
>Translated_704_residues MNPVLIAIACGLLAVLYGFITSRQVLSASAGNEKMQEIAGAIQEGAKAYLGRQYRTIAVVGVVVAVLVGVFLGPISATGF VIGAVLSGVAGYIGMNISVRANVRTAAAAQTGLQAGLTMAFRAGAITGMLVAGLALLAISVFFWYLTGPGGFSVGGDDRT VVDALVALAFGASLISIFARLGGGIFTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYVVT VGATMVLIALLLKGAGDMLLPLMTLPLLMGGVCIITSIIGTYFVRLGSGTNVMGAMYKGFLVTAILSIPAIWFATQYALG DMNAEIAGTGFNGRALFYCSLLGLVITGLIIWITEYYTGTNYRPVRSIAKASETGHGTNVIQGLAVSLESTALPTLVICV GIIVAYQVAGIIGIAFGATAMLALAGMVVALDAYGPVTDNAGGIAEMAGLDDSVREKTDLLDAVGNTTKAVTKGYAIGSA GLAALVLFGTYTADITEYSAELGLDAPLTFSLSSPYVIVGLLLGALLPYLFGAMGMTAVGRAAGDVVKDVRDQFANNKGI MDGTSRPDYARTVDLVTKAAIKEMIVPSLLPVLAPIVVYFVILWVAGPAAALEALGALLLGVIVGGLFVAISMTSGGGAW DNAKKYIEDGNHGGKGSEAHKAAVTGDTVGDPYKDTAGPAVNPMIKITNIVAILLLAALAHGAA >Mature_704_residues MNPVLIAIACGLLAVLYGFITSRQVLSASAGNEKMQEIAGAIQEGAKAYLGRQYRTIAVVGVVVAVLVGVFLGPISATGF VIGAVLSGVAGYIGMNISVRANVRTAAAAQTGLQAGLTMAFRAGAITGMLVAGLALLAISVFFWYLTGPGGFSVGGDDRT VVDALVALAFGASLISIFARLGGGIFTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYVVT VGATMVLIALLLKGAGDMLLPLMTLPLLMGGVCIITSIIGTYFVRLGSGTNVMGAMYKGFLVTAILSIPAIWFATQYALG DMNAEIAGTGFNGRALFYCSLLGLVITGLIIWITEYYTGTNYRPVRSIAKASETGHGTNVIQGLAVSLESTALPTLVICV GIIVAYQVAGIIGIAFGATAMLALAGMVVALDAYGPVTDNAGGIAEMAGLDDSVREKTDLLDAVGNTTKAVTKGYAIGSA GLAALVLFGTYTADITEYSAELGLDAPLTFSLSSPYVIVGLLLGALLPYLFGAMGMTAVGRAAGDVVKDVRDQFANNKGI MDGTSRPDYARTVDLVTKAAIKEMIVPSLLPVLAPIVVYFVILWVAGPAAALEALGALLLGVIVGGLFVAISMTSGGGAW DNAKKYIEDGNHGGKGSEAHKAAVTGDTVGDPYKDTAGPAVNPMIKITNIVAILLLAALAHGAA
Specific function: Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force [H]
COG id: COG3808
COG function: function code C; Inorganic pyrophosphatase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-insensitive subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004131 [H]
Pfam domain/function: PF03030 H_PPase [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 71686; Mature: 71686
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPVLIAIACGLLAVLYGFITSRQVLSASAGNEKMQEIAGAIQEGAKAYLGRQYRTIAVV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH GVVVAVLVGVFLGPISATGFVIGAVLSGVAGYIGMNISVRANVRTAAAAQTGLQAGLTMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHH FRAGAITGMLVAGLALLAISVFFWYLTGPGGFSVGGDDRTVVDALVALAFGASLISIFAR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LGGGIFTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYVVT HCCCHHHHHHHHCHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHH VGATMVLIALLLKGAGDMLLPLMTLPLLMGGVCIITSIIGTYFVRLGSGTNVMGAMYKGF HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LVTAILSIPAIWFATQYALGDMNAEIAGTGFNGRALFYCSLLGLVITGLIIWITEYYTGT HHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC NYRPVRSIAKASETGHGTNVIQGLAVSLESTALPTLVICVGIIVAYQVAGIIGIAFGATA CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLALAGMVVALDAYGPVTDNAGGIAEMAGLDDSVREKTDLLDAVGNTTKAVTKGYAIGSA HHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCHH GLAALVLFGTYTADITEYSAELGLDAPLTFSLSSPYVIVGLLLGALLPYLFGAMGMTAVG HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH RAAGDVVKDVRDQFANNKGIMDGTSRPDYARTVDLVTKAAIKEMIVPSLLPVLAPIVVYF HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VILWVAGPAAALEALGALLLGVIVGGLFVAISMTSGGGAWDNAKKYIEDGNHGGKGSEAH HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCCCCCCCCCCC KAAVTGDTVGDPYKDTAGPAVNPMIKITNIVAILLLAALAHGAA HHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNPVLIAIACGLLAVLYGFITSRQVLSASAGNEKMQEIAGAIQEGAKAYLGRQYRTIAVV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH GVVVAVLVGVFLGPISATGFVIGAVLSGVAGYIGMNISVRANVRTAAAAQTGLQAGLTMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHH FRAGAITGMLVAGLALLAISVFFWYLTGPGGFSVGGDDRTVVDALVALAFGASLISIFAR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LGGGIFTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYVVT HCCCHHHHHHHHCHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHH VGATMVLIALLLKGAGDMLLPLMTLPLLMGGVCIITSIIGTYFVRLGSGTNVMGAMYKGF HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LVTAILSIPAIWFATQYALGDMNAEIAGTGFNGRALFYCSLLGLVITGLIIWITEYYTGT HHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC NYRPVRSIAKASETGHGTNVIQGLAVSLESTALPTLVICVGIIVAYQVAGIIGIAFGATA CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLALAGMVVALDAYGPVTDNAGGIAEMAGLDDSVREKTDLLDAVGNTTKAVTKGYAIGSA HHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCHH GLAALVLFGTYTADITEYSAELGLDAPLTFSLSSPYVIVGLLLGALLPYLFGAMGMTAVG HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH RAAGDVVKDVRDQFANNKGIMDGTSRPDYARTVDLVTKAAIKEMIVPSLLPVLAPIVVYF HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VILWVAGPAAALEALGALLLGVIVGGLFVAISMTSGGGAWDNAKKYIEDGNHGGKGSEAH HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCCCCCCCCCCC KAAVTGDTVGDPYKDTAGPAVNPMIKITNIVAILLLAALAHGAA HHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9630689; 11956221 [H]