| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is cyp108 [H]
Identifier: 103487504
GI number: 103487504
Start: 2131015
End: 2132301
Strand: Reverse
Name: cyp108 [H]
Synonym: Sala_2021
Alternate gene names: 103487504
Gene position: 2132301-2131015 (Counterclockwise)
Preceding gene: 103487505
Following gene: 103487502
Centisome position: 63.74
GC content: 63.87
Gene sequence:
>1287_bases ATGACAAAACCTATATTGCCCGGAGAGGTCGCCGCCGCGGTCGTCAATCCCGCCGCCTATGGGGCGTGGAAGCCGCTTCA TGAACAGCTTGCCTGGGCGCGGGCGAACATGCCGCTGGCGGTTGCGGAGAATCCGAACCACGATCCTTTCTGGCTCGTCA CGCGCCATGCCGACGTCATGGCGATCAGCCGCGATCCGCAACGCTTTGCCAACGGCATCCGGCCGACGGTGCTGACCGAC CGCGCGGGGGAGGCGCTGGCGCGCGCGGCGACGCCGGGGGGCGATGGCCATCTGGTTCGCTCGCTCGTCCAGATGGATGC GCCCGATCATATGAAATACCGACTGCTGACGCAGAGCTGGTTCATGCCCAGGAATCTGAAGACGATCGAGGACCGGATTC GGCAGATCGCGCGCGACACCGTTGAGCACATGCTGGAGGCAGGGGGATCATGCGATTTCGCGCGCGATGTGGCGGCGCAT TATCCGCTGCGCGTCATCATGGATATATTGGGCGTGCCGCCCGAGGACGAACCGCGGATGCTGATGCTGACGCAGCAATT GTTCGGACCGACCGATCCCGAACTCAACCGCAGCCGTGAAGCAATCACCAGTTCCGAACAGGCGATCGCGATGCTGCATT ATGTCATCGCGGACTTCGAGGCGTATTTCGGGGCGCTGACCGCCGACCGCCGCGCCAACCCGCGCGAGGATATTGCGACG GTGATCGCCAATGCCATGGTCGATGGCGAGCAGATTCCCGACCGCGAACTCGCCGGCTATTATATGATCATCGCGACCGC GGGCCACGACACGACGAGCGCGTCCACCGCCGGGGCGATCATGGAACTGGCCCGCAATCCCACGCTGTTTCAGCGGTTTC GCGATGCGGAGAGCGACAAGGCGGGGCTGATCGAGGAAGCGATCCGCTGGACGACGCCGGTGCAGCATTTCATGCGCAGT GCCCGGCAAGATGTCGAAATGGGCGGGCAGACGATCCGCGAAGGCGACTGGCTGATGCTGAATTATGTTTCCGCAAACCG CGACGAGGGGGTCTTTGTCGATCCGTTCATGTTCGATCCTGACCGCGCGAAGAACCCGCAGATCGCCTTTGGTTTCGGCG CGCATGTCTGCCTGGGGCAGCATCTGGCGCGGCTGGAGATGCGGATTTTGATGGAGGAGTTACTGCCGCGGCTGACCAGC CTGGAGCTGGCGGGCGAGCCCGCGCGCGTCGAATCGGTGTTCGTCGGCGGGCTGAAGCGGCTGCCGATCCGGTTTGAAGC GGCGTAG
Upstream 100 bases:
>100_bases GTTGCGGGCCGACTGGGCGGTCAGCTGATGCGCGGGATTTTGGGAAGCCTGTTCAAATAGGCCGTCGACTCCGCGACCGA TTCGCGGCAGTTTTGGTTGC
Downstream 100 bases:
>100_bases CGCCGGTTCTGGATACTGGTCGGACGGGTTCCGTCCGCTAGAGGCCGTTCGCATCGAGCGAAGTCGAGATGCCCCTCAGA ACTGCTCCAGCCTGAGGGGT
Product: cytochrome P450
Products: NA
Alternate protein names: Cytochrome P450terp; Cytochrome P450 108 [H]
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MTKPILPGEVAAAVVNPAAYGAWKPLHEQLAWARANMPLAVAENPNHDPFWLVTRHADVMAISRDPQRFANGIRPTVLTD RAGEALARAATPGGDGHLVRSLVQMDAPDHMKYRLLTQSWFMPRNLKTIEDRIRQIARDTVEHMLEAGGSCDFARDVAAH YPLRVIMDILGVPPEDEPRMLMLTQQLFGPTDPELNRSREAITSSEQAIAMLHYVIADFEAYFGALTADRRANPREDIAT VIANAMVDGEQIPDRELAGYYMIIATAGHDTTSASTAGAIMELARNPTLFQRFRDAESDKAGLIEEAIRWTTPVQHFMRS ARQDVEMGGQTIREGDWLMLNYVSANRDEGVFVDPFMFDPDRAKNPQIAFGFGAHVCLGQHLARLEMRILMEELLPRLTS LELAGEPARVESVFVGGLKRLPIRFEAA
Sequences:
>Translated_428_residues MTKPILPGEVAAAVVNPAAYGAWKPLHEQLAWARANMPLAVAENPNHDPFWLVTRHADVMAISRDPQRFANGIRPTVLTD RAGEALARAATPGGDGHLVRSLVQMDAPDHMKYRLLTQSWFMPRNLKTIEDRIRQIARDTVEHMLEAGGSCDFARDVAAH YPLRVIMDILGVPPEDEPRMLMLTQQLFGPTDPELNRSREAITSSEQAIAMLHYVIADFEAYFGALTADRRANPREDIAT VIANAMVDGEQIPDRELAGYYMIIATAGHDTTSASTAGAIMELARNPTLFQRFRDAESDKAGLIEEAIRWTTPVQHFMRS ARQDVEMGGQTIREGDWLMLNYVSANRDEGVFVDPFMFDPDRAKNPQIAFGFGAHVCLGQHLARLEMRILMEELLPRLTS LELAGEPARVESVFVGGLKRLPIRFEAA >Mature_427_residues TKPILPGEVAAAVVNPAAYGAWKPLHEQLAWARANMPLAVAENPNHDPFWLVTRHADVMAISRDPQRFANGIRPTVLTDR AGEALARAATPGGDGHLVRSLVQMDAPDHMKYRLLTQSWFMPRNLKTIEDRIRQIARDTVEHMLEAGGSCDFARDVAAHY PLRVIMDILGVPPEDEPRMLMLTQQLFGPTDPELNRSREAITSSEQAIAMLHYVIADFEAYFGALTADRRANPREDIATV IANAMVDGEQIPDRELAGYYMIIATAGHDTTSASTAGAIMELARNPTLFQRFRDAESDKAGLIEEAIRWTTPVQHFMRSA RQDVEMGGQTIREGDWLMLNYVSANRDEGVFVDPFMFDPDRAKNPQIAFGFGAHVCLGQHLARLEMRILMEELLPRLTSL ELAGEPARVESVFVGGLKRLPIRFEAA
Specific function: Catalyzes the hydroxylation of alpha-terpineol [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
Organism=Drosophila melanogaster, GI17933518, Length=195, Percent_Identity=27.6923076923077, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24641483, Length=200, Percent_Identity=29.5, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI28571357, Length=200, Percent_Identity=29.5, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI24642101, Length=174, Percent_Identity=29.3103448275862, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 47661; Mature: 47530
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPILPGEVAAAVVNPAAYGAWKPLHEQLAWARANMPLAVAENPNHDPFWLVTRHADVM CCCCCCCHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEECCCEE AISRDPQRFANGIRPTVLTDRAGEALARAATPGGDGHLVRSLVQMDAPDHMKYRLLTQSW EECCCHHHHHCCCCCCEECCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH FMPRNLKTIEDRIRQIARDTVEHMLEAGGSCDFARDVAAHYPLRVIMDILGVPPEDEPRM CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHCCCCCCCCHH LMLTQQLFGPTDPELNRSREAITSSEQAIAMLHYVIADFEAYFGALTADRRANPREDIAT HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH VIANAMVDGEQIPDRELAGYYMIIATAGHDTTSASTAGAIMELARNPTLFQRFRDAESDK HHHHHHHCCCCCCCHHHCCEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCH AGLIEEAIRWTTPVQHFMRSARQDVEMGGQTIREGDWLMLNYVSANRDEGVFVDPFMFDP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEEEECCCCCCEEECCEEECC DRAKNPQIAFGFGAHVCLGQHLARLEMRILMEELLPRLTSLELAGEPARVESVFVGGLKR CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHH LPIRFEAA CCEEEECC >Mature Secondary Structure TKPILPGEVAAAVVNPAAYGAWKPLHEQLAWARANMPLAVAENPNHDPFWLVTRHADVM CCCCCCHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEECCCEE AISRDPQRFANGIRPTVLTDRAGEALARAATPGGDGHLVRSLVQMDAPDHMKYRLLTQSW EECCCHHHHHCCCCCCEECCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH FMPRNLKTIEDRIRQIARDTVEHMLEAGGSCDFARDVAAHYPLRVIMDILGVPPEDEPRM CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHCCCCCCCCHH LMLTQQLFGPTDPELNRSREAITSSEQAIAMLHYVIADFEAYFGALTADRRANPREDIAT HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH VIANAMVDGEQIPDRELAGYYMIIATAGHDTTSASTAGAIMELARNPTLFQRFRDAESDK HHHHHHHCCCCCCCHHHCCEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCH AGLIEEAIRWTTPVQHFMRSARQDVEMGGQTIREGDWLMLNYVSANRDEGVFVDPFMFDP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEEEECCCCCCEEECCEEECC DRAKNPQIAFGFGAHVCLGQHLARLEMRILMEELLPRLTSLELAGEPARVESVFVGGLKR CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHH LPIRFEAA CCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1629218; 8120894 [H]