| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487336
Identifier: 103487336
GI number: 103487336
Start: 1947083
End: 1947280
Strand: Reverse
Name: 103487336
Synonym: Sala_1852
Alternate gene names: NA
Gene position: 1947280-1947083 (Counterclockwise)
Preceding gene: 103487337
Following gene: 103487331
Centisome position: 58.21
GC content: 67.17
Gene sequence:
>198_bases ATGGGAGCGGCAAAGGGGATTTTGGCGGTGGTCGGCGTCGCGCTGGTGCTGGTCGGGACGCTGTGGGCGTTGCAGGGGCT GGACATCGTCCGCTGGCCCGCGAGCAGCTTCATGCTCGGCGATACGGTATGGACGCGCAACGGCGTCGTCACCGCGGTGG TCGGCGTCGTGCTGATCTGGTTCGCGCGGTGGAAATGA
Upstream 100 bases:
>100_bases GGCGACGATGCTGGGATGCTGGCTTTTCTATGCGATTGGGCGCAGCATCGGCTGGCTGCGGCCGCTGATCGGGCTCCAAC GGCGATAGGGGAGAAAAGCC
Downstream 100 bases:
>100_bases TCGACCTGCGGCGGCTATTGTCCGAAATAGCCGCCGCGACGGCCGCTATTTGCCGAGCGCGAAGCTGGTCGAGGACAGGA ATTTCCAGCCGCCCTCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MGAAKGILAVVGVALVLVGTLWALQGLDIVRWPASSFMLGDTVWTRNGVVTAVVGVVLIWFARWK
Sequences:
>Translated_65_residues MGAAKGILAVVGVALVLVGTLWALQGLDIVRWPASSFMLGDTVWTRNGVVTAVVGVVLIWFARWK >Mature_64_residues GAAKGILAVVGVALVLVGTLWALQGLDIVRWPASSFMLGDTVWTRNGVVTAVVGVVLIWFARWK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6937; Mature: 6806
Theoretical pI: Translated: 11.55; Mature: 11.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAAKGILAVVGVALVLVGTLWALQGLDIVRWPASSFMLGDTVWTRNGVVTAVVGVVLIW CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEECCCHHCCCCHHHHHHHHHHHH FARWK HHCCC >Mature Secondary Structure GAAKGILAVVGVALVLVGTLWALQGLDIVRWPASSFMLGDTVWTRNGVVTAVVGVVLIW CCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEECCCHHCCCCHHHHHHHHHHHH FARWK HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA