Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is mdoC [C]

Identifier: 103487337

GI number: 103487337

Start: 1947293

End: 1948447

Strand: Reverse

Name: mdoC [C]

Synonym: Sala_1853

Alternate gene names: 103487337

Gene position: 1948447-1947293 (Counterclockwise)

Preceding gene: 103487338

Following gene: 103487336

Centisome position: 58.25

GC content: 65.37

Gene sequence:

>1155_bases
ATGATGAAGGGAGGGGGCTGCATGACCACGCAACGCCACTACGGCATGGACTGGCTGCGCATCGGCGCCTTCGCGCTGCT
GATCCTCTATCATATCGGCATGTATTTCGTGCCGTGGGATTGGCATGTGAAGATCGATCCGACGATCGATTGGGTTGCGT
TGCCGATGTACGCGACGAATGGCTGGCGGCTTCCATTGCTGTTTCTGGTGTCGGGTTATGCGAATGCTGCGTTGCTGGTG
AAGCTGGACGGCGCCGGGGCGTTCGCGCGGTCGCGCAGCGCGCGGTTGCTGATCCCGCTGGCGTTCGGGATCATCGTGGT
CATCCCGCCGCAACCATGGGTCGAGCTGGTCGGCCAGCATGGCTATCCGCACGGCTTTCTGCGCTTCTGGACGTCGGACT
ATTTCCGCTTCGGCACGCTGGGCGGGATCGTGCTGCCGACCTGGCAGCATCTGTGGTTCGTTGTCTATCTGTGGACCTAT
ACGATGCTCGCCGCGCTGCTGCTCGCGGCGGTGCCCGCGGCGATGCGGGGGTGGATCGCCGATGGCGCGGCGCGGCTGCT
GTCGGGCTGGCGGCTGCTGATCGTGCCGATGCTGTGGTGGCTCGCGGTTTACGGCGCCTTTCCTGAGCATGACGAGACGC
ATGCGCTGTTCGACGACGGGCCGGCGCATCTCCGCTATCTTATGGCTTTCGGCGCGGGCTGGCTGCTGCGCGTGCGGCCC
GCCCTGTTCGCGGCCGTCGCCCGCTGCTGGAAGGTCGCCGCGCTGCTTGGCCTGCTGGCGTTCCTGCCGATCATGTGGGT
CGAATCGACTTGGTCCGGCGACATGCGCGCGCCCGACTGGGCGATCGCGCTATTCCATGTCGCGCGGCGGGTGCAGGGCT
GGGTAGCGATCGTCGCGCTCATCGGCGTCGCCGACCGGTACTGGAACCGCGACCATCCAAAACGCGCGATGTTCGCCGAG
GCGGTCTTCCCCTTTTACATCATTCACCAGACGATCATCGTCGTCGCCGGATGGTATCTGCTGCGAGCGGGCGTGGCGGC
GTTGCCATCCTTCCTGATCCTGCTCGCGGCGACGATGCTGGGATGCTGGCTTTTCTATGCGATTGGGCGCAGCATCGGCT
GGCTGCGGCCGCTGATCGGGCTCCAACGGCGATAG

Upstream 100 bases:

>100_bases
TTCGTCCTACCGGTGGAGACCGGGATCTCGATCTTGCGCCGGATCGCCACGGCGAGATCCCGGCCTTCGCCGGGATGACG
GACGGCAGGGTGGTGGAGAA

Downstream 100 bases:

>100_bases
GGGAGAAAAGCCATGGGAGCGGCAAAGGGGATTTTGGCGGTGGTCGGCGTCGCGCTGGTGCTGGTCGGGACGCTGTGGGC
GTTGCAGGGGCTGGACATCG

Product: hypothetical protein

Products: NA

Alternate protein names: Inner Membrane Protein; Acetyltransferase; Transmembrane Protein; Acyltransferase Putative; 3 4-Dihydroxy-2-Butanone 4-Phosphate Synthase

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MMKGGGCMTTQRHYGMDWLRIGAFALLILYHIGMYFVPWDWHVKIDPTIDWVALPMYATNGWRLPLLFLVSGYANAALLV
KLDGAGAFARSRSARLLIPLAFGIIVVIPPQPWVELVGQHGYPHGFLRFWTSDYFRFGTLGGIVLPTWQHLWFVVYLWTY
TMLAALLLAAVPAAMRGWIADGAARLLSGWRLLIVPMLWWLAVYGAFPEHDETHALFDDGPAHLRYLMAFGAGWLLRVRP
ALFAAVARCWKVAALLGLLAFLPIMWVESTWSGDMRAPDWAIALFHVARRVQGWVAIVALIGVADRYWNRDHPKRAMFAE
AVFPFYIIHQTIIVVAGWYLLRAGVAALPSFLILLAATMLGCWLFYAIGRSIGWLRPLIGLQRR

Sequences:

>Translated_384_residues
MMKGGGCMTTQRHYGMDWLRIGAFALLILYHIGMYFVPWDWHVKIDPTIDWVALPMYATNGWRLPLLFLVSGYANAALLV
KLDGAGAFARSRSARLLIPLAFGIIVVIPPQPWVELVGQHGYPHGFLRFWTSDYFRFGTLGGIVLPTWQHLWFVVYLWTY
TMLAALLLAAVPAAMRGWIADGAARLLSGWRLLIVPMLWWLAVYGAFPEHDETHALFDDGPAHLRYLMAFGAGWLLRVRP
ALFAAVARCWKVAALLGLLAFLPIMWVESTWSGDMRAPDWAIALFHVARRVQGWVAIVALIGVADRYWNRDHPKRAMFAE
AVFPFYIIHQTIIVVAGWYLLRAGVAALPSFLILLAATMLGCWLFYAIGRSIGWLRPLIGLQRR
>Mature_384_residues
MMKGGGCMTTQRHYGMDWLRIGAFALLILYHIGMYFVPWDWHVKIDPTIDWVALPMYATNGWRLPLLFLVSGYANAALLV
KLDGAGAFARSRSARLLIPLAFGIIVVIPPQPWVELVGQHGYPHGFLRFWTSDYFRFGTLGGIVLPTWQHLWFVVYLWTY
TMLAALLLAAVPAAMRGWIADGAARLLSGWRLLIVPMLWWLAVYGAFPEHDETHALFDDGPAHLRYLMAFGAGWLLRVRP
ALFAAVARCWKVAALLGLLAFLPIMWVESTWSGDMRAPDWAIALFHVARRVQGWVAIVALIGVADRYWNRDHPKRAMFAE
AVFPFYIIHQTIIVVAGWYLLRAGVAALPSFLILLAATMLGCWLFYAIGRSIGWLRPLIGLQRR

Specific function: Necessary For The Succinyl Substitution Of Periplasmic Glucans. Could Catalyze The Transfer Of Succinyl Residues From The Cytoplasmic Side Of The Membrane To The Nascent Glucan Backbones On The Periplasmic Side Of The Membrane. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.-.- [C]

Molecular weight: Translated: 43433; Mature: 43433

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKGGGCMTTQRHYGMDWLRIGAFALLILYHIGMYFVPWDWHVKIDPTIDWVALPMYATN
CCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCCEEEEEEEECC
GWRLPLLFLVSGYANAALLVKLDGAGAFARSRSARLLIPLAFGIIVVIPPQPWVELVGQH
CCCHHHHHHHHCCCCEEEEEEECCCCCHHHCCCCEEEEEEECCEEEEECCCHHHHHHCCC
GYPHGFLRFWTSDYFRFGTLGGIVLPTWQHLWFVVYLWTYTMLAALLLAAVPAAMRGWIA
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGAARLLSGWRLLIVPMLWWLAVYGAFPEHDETHALFDDGPAHLRYLMAFGAGWLLRVRP
HHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHH
ALFAAVARCWKVAALLGLLAFLPIMWVESTWSGDMRAPDWAIALFHVARRVQGWVAIVAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IGVADRYWNRDHPKRAMFAEAVFPFYIIHQTIIVVAGWYLLRAGVAALPSFLILLAATML
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GCWLFYAIGRSIGWLRPLIGLQRR
HHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMKGGGCMTTQRHYGMDWLRIGAFALLILYHIGMYFVPWDWHVKIDPTIDWVALPMYATN
CCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCCEEEEEEEECC
GWRLPLLFLVSGYANAALLVKLDGAGAFARSRSARLLIPLAFGIIVVIPPQPWVELVGQH
CCCHHHHHHHHCCCCEEEEEEECCCCCHHHCCCCEEEEEEECCEEEEECCCHHHHHHCCC
GYPHGFLRFWTSDYFRFGTLGGIVLPTWQHLWFVVYLWTYTMLAALLLAAVPAAMRGWIA
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGAARLLSGWRLLIVPMLWWLAVYGAFPEHDETHALFDDGPAHLRYLMAFGAGWLLRVRP
HHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHH
ALFAAVARCWKVAALLGLLAFLPIMWVESTWSGDMRAPDWAIALFHVARRVQGWVAIVAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IGVADRYWNRDHPKRAMFAEAVFPFYIIHQTIIVVAGWYLLRAGVAALPSFLILLAATML
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GCWLFYAIGRSIGWLRPLIGLQRR
HHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA