Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487331

Identifier: 103487331

GI number: 103487331

Start: 1942511

End: 1943266

Strand: Reverse

Name: 103487331

Synonym: Sala_1847

Alternate gene names: NA

Gene position: 1943266-1942511 (Counterclockwise)

Preceding gene: 103487336

Following gene: 103487326

Centisome position: 58.09

GC content: 62.83

Gene sequence:

>756_bases
ATGAAGTTTCTTACCAAAGCGTGTTTCGGCATGCTGCTCGCCGCGTCGGCAATGTCGACGCCCGCCTTCGCTCAGGAAGA
AGAAGCAGAAGCCAGCGGCCCCTTCACGCTTTCGGGCGGCATTGCGGTGACGAGCGACTATCGCTTCCGCGGCATTTCGC
TGTCGAACGAAAAGGTCGCGGTGCAGCCGACGCTGACCGTTTCGCATGAAAGCGGCTTCTATGCCGGCGTCTGGGGCTCG
TCGCTTCCCGACAGCCCGGCCTATGGCAAGTTCGAGCTCGACGTCTATGGCGGTTTCAACACCGAAATCGCGCCGGGCAC
GACCGCCGACATCGGCGTGACCTGGTATACCTATCCCGGCAGCGACGATGGCGGCGCGCCGACCGACTATTTCGAGGGCA
TCGGCAAGCTGTCGCACGACATCGGCCCCGTCTCGATCACCGGCATGGTCGCTTATGCGCCCAAGCAGGATTCACTCGGC
GACCAGGACAATATCTATCTGAACCTCGGCGCCGGTTTTGGCATTCCGAACACCCCGGTCACGCTGACCGCGGGGATCGG
CTATAATGACGGCTCGCTCGGCCTCGTGTCGCCCGACGGCCAATATGTCGACTGGTCGCTCGGCGCGTCCTTCGCCGCGG
GGCCGCTGACTTTCTCGGCGCAATATATCGACACCGACGTCCCGAAGACGGGGGTGAAGGCGGTCGATACGCTGTACGAT
CCGACCGTGGTGTTCACACTCGGCGCGTCCTTCTGA

Upstream 100 bases:

>100_bases
CGGCAATTTCGAATCGTTCGCCGTCACAGACCCGCAAAAAGAGGTGTGGACGCGTCCGGCAGGCTGGGACGATCCGTTTG
ACCATTTAGGGGGATCACCC

Downstream 100 bases:

>100_bases
CGACCTAGCGGGTCCGCGGCCACGCGAAGGGGACGGCTTCGGGGGAGGCCGTCCCCTTTGTTGCGCGAAAGCTGGGAGCG
ACGGCAGGATTCGTCCATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MKFLTKACFGMLLAASAMSTPAFAQEEEAEASGPFTLSGGIAVTSDYRFRGISLSNEKVAVQPTLTVSHESGFYAGVWGS
SLPDSPAYGKFELDVYGGFNTEIAPGTTADIGVTWYTYPGSDDGGAPTDYFEGIGKLSHDIGPVSITGMVAYAPKQDSLG
DQDNIYLNLGAGFGIPNTPVTLTAGIGYNDGSLGLVSPDGQYVDWSLGASFAAGPLTFSAQYIDTDVPKTGVKAVDTLYD
PTVVFTLGASF

Sequences:

>Translated_251_residues
MKFLTKACFGMLLAASAMSTPAFAQEEEAEASGPFTLSGGIAVTSDYRFRGISLSNEKVAVQPTLTVSHESGFYAGVWGS
SLPDSPAYGKFELDVYGGFNTEIAPGTTADIGVTWYTYPGSDDGGAPTDYFEGIGKLSHDIGPVSITGMVAYAPKQDSLG
DQDNIYLNLGAGFGIPNTPVTLTAGIGYNDGSLGLVSPDGQYVDWSLGASFAAGPLTFSAQYIDTDVPKTGVKAVDTLYD
PTVVFTLGASF
>Mature_251_residues
MKFLTKACFGMLLAASAMSTPAFAQEEEAEASGPFTLSGGIAVTSDYRFRGISLSNEKVAVQPTLTVSHESGFYAGVWGS
SLPDSPAYGKFELDVYGGFNTEIAPGTTADIGVTWYTYPGSDDGGAPTDYFEGIGKLSHDIGPVSITGMVAYAPKQDSLG
DQDNIYLNLGAGFGIPNTPVTLTAGIGYNDGSLGLVSPDGQYVDWSLGASFAAGPLTFSAQYIDTDVPKTGVKAVDTLYD
PTVVFTLGASF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26119; Mature: 26119

Theoretical pI: Translated: 3.89; Mature: 3.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLTKACFGMLLAASAMSTPAFAQEEEAEASGPFTLSGGIAVTSDYRFRGISLSNEKVA
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCEEEECCCEEEEEEECCCEEE
VQPTLTVSHESGFYAGVWGSSLPDSPAYGKFELDVYGGFNTEIAPGTTADIGVTWYTYPG
EEEEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCC
SDDGGAPTDYFEGIGKLSHDIGPVSITGMVAYAPKQDSLGDQDNIYLNLGAGFGIPNTPV
CCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCE
TLTAGIGYNDGSLGLVSPDGQYVDWSLGASFAAGPLTFSAQYIDTDVPKTGVKAVDTLYD
EEEEECCCCCCCEEEECCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHCC
PTVVFTLGASF
CEEEEEECCCC
>Mature Secondary Structure
MKFLTKACFGMLLAASAMSTPAFAQEEEAEASGPFTLSGGIAVTSDYRFRGISLSNEKVA
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCEEEECCCEEEEEEECCCEEE
VQPTLTVSHESGFYAGVWGSSLPDSPAYGKFELDVYGGFNTEIAPGTTADIGVTWYTYPG
EEEEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCC
SDDGGAPTDYFEGIGKLSHDIGPVSITGMVAYAPKQDSLGDQDNIYLNLGAGFGIPNTPV
CCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCE
TLTAGIGYNDGSLGLVSPDGQYVDWSLGASFAAGPLTFSAQYIDTDVPKTGVKAVDTLYD
EEEEECCCCCCCEEEECCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHCC
PTVVFTLGASF
CEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA