Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487285

Identifier: 103487285

GI number: 103487285

Start: 1897539

End: 1898003

Strand: Reverse

Name: 103487285

Synonym: Sala_1801

Alternate gene names: NA

Gene position: 1898003-1897539 (Counterclockwise)

Preceding gene: 103487286

Following gene: 103487282

Centisome position: 56.74

GC content: 65.81

Gene sequence:

>465_bases
ATGGCTGACAGCCCGATCCACCACGCCAGCTTTTCCGTCGAACGCGCCTATCGTTCGCCGCGTCAACGGGTTTTCGCCGC
CTTCACCAGTGCCGAGGCGCGGCGCCGCTGGCTTGTCGAAACCGACGGCTGGACCGTCCACGCCTATGATCCGCCCGCCG
AAGTCGTACCGGGCGCTGTGGAGTCAAGCCGTTTCAGCCCGCCGGGTGCCGACGTCGTCCTGACCAATGATACGACCTAC
CTCGATGTGGCGCCGCAGGAACGGCTGATCTTCGCCTATGCCATGACGGTCGATGGAAAGCCGCTGTCCTCGTCGCTCGC
GACCGTCGAGTTTTTTGATGAGGGGCAGGGCGCGCGCATCCGCTTTACCGAACAGGGCGCCTATCTCGACGGCGATGTGG
CCGGACGCGAAGCCGGAACGCGCGAACTGCTGGACGGGCTGGCGACGGAACTCGGCGAGGCCTGA

Upstream 100 bases:

>100_bases
GTCGAACGCTGGGTGGCCGAGCAGAAGAAAGCCTGGGAGCGCCGACTCGACCGGCTCGGTGACTATCTGGGCGAATCCCC
CGGAAATGAAAGGAATGACC

Downstream 100 bases:

>100_bases
GCGGTGATGGCACAAGGAGGCGGCGGGGCATTGGCGCGCCGCCCCCTTTTTCATACGCTACGCTGCTCGTCGAGGAAGGC
GGCGACGGCATCTAGGTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MADSPIHHASFSVERAYRSPRQRVFAAFTSAEARRRWLVETDGWTVHAYDPPAEVVPGAVESSRFSPPGADVVLTNDTTY
LDVAPQERLIFAYAMTVDGKPLSSSLATVEFFDEGQGARIRFTEQGAYLDGDVAGREAGTRELLDGLATELGEA

Sequences:

>Translated_154_residues
MADSPIHHASFSVERAYRSPRQRVFAAFTSAEARRRWLVETDGWTVHAYDPPAEVVPGAVESSRFSPPGADVVLTNDTTY
LDVAPQERLIFAYAMTVDGKPLSSSLATVEFFDEGQGARIRFTEQGAYLDGDVAGREAGTRELLDGLATELGEA
>Mature_153_residues
ADSPIHHASFSVERAYRSPRQRVFAAFTSAEARRRWLVETDGWTVHAYDPPAEVVPGAVESSRFSPPGADVVLTNDTTYL
DVAPQERLIFAYAMTVDGKPLSSSLATVEFFDEGQGARIRFTEQGAYLDGDVAGREAGTRELLDGLATELGEA

Specific function: Unknown

COG id: COG3832

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16782; Mature: 16650

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADSPIHHASFSVERAYRSPRQRVFAAFTSAEARRRWLVETDGWTVHAYDPPAEVVPGAV
CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEECCCEEEEEECCCHHHCCCCC
ESSRFSPPGADVVLTNDTTYLDVAPQERLIFAYAMTVDGKPLSSSLATVEFFDEGQGARI
CCCCCCCCCCCEEEECCCEEEEECCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCEE
RFTEQGAYLDGDVAGREAGTRELLDGLATELGEA
EEECCCCEECCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ADSPIHHASFSVERAYRSPRQRVFAAFTSAEARRRWLVETDGWTVHAYDPPAEVVPGAV
CCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEECCCEEEEEECCCHHHCCCCC
ESSRFSPPGADVVLTNDTTYLDVAPQERLIFAYAMTVDGKPLSSSLATVEFFDEGQGARI
CCCCCCCCCCCEEEECCCEEEEECCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCEE
RFTEQGAYLDGDVAGREAGTRELLDGLATELGEA
EEECCCCEECCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA