Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487286

Identifier: 103487286

GI number: 103487286

Start: 1897996

End: 1898346

Strand: Reverse

Name: 103487286

Synonym: Sala_1802

Alternate gene names: NA

Gene position: 1898346-1897996 (Counterclockwise)

Preceding gene: 103487287

Following gene: 103487285

Centisome position: 56.75

GC content: 67.52

Gene sequence:

>351_bases
ATGCTTAACCATCAGGCCGCGCTCGATCCGATTCTTCATGCCATCGCCGACCCGACGCGGCGGGGCATGGTCGAACAGCT
TGCCAAGGGGCCGGCATCGGTCAGCGCGCTCGCCGGGCGGCTGCCGATGTCGCTGCAGGCGGCGATGCAGCATCTCGCGG
TGCTCGAAGCCGCCGAGGTGGTGCGCAGCGAGAAGGTCGGCCGGGTGCGGACGGTGTCGCTGAACCCCGCCGCGCTCCAC
CAGGTCGAACGCTGGGTGGCCGAGCAGAAGAAAGCCTGGGAGCGCCGACTCGACCGGCTCGGTGACTATCTGGGCGAATC
CCCCGGAAATGAAAGGAATGACCATGGCTGA

Upstream 100 bases:

>100_bases
GTCGGCGACGCCTCGCCGCGCGCAGCGGCGACGGCCCGCCTTCCGGATAATAGTCAATTACTCACTTGACTATTATCCGG
TCGCGTGATTAGTCAAGTGA

Downstream 100 bases:

>100_bases
CAGCCCGATCCACCACGCCAGCTTTTCCGTCGAACGCGCCTATCGTTCGCCGCGTCAACGGGTTTTCGCCGCCTTCACCA
GTGCCGAGGCGCGGCGCCGC

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator; Transcriptional Regulator ArsR Family Protein; Transcriptional Regulator Arsr Family; Transcriptional Regulator Protein; Regulatory Protein Arsr; ArsR-Family Transcriptional Regulator; ArsR Family Regulatory; Transcriptional Regulator Protein ArsR Family; Transcriptional Regulatory Protein; Transcriptional Regulator TrmB; Transcriptional Regulatory ArsR Family; Transcription Regulator ArsR; ArsR Family Transcriptional Regulatory Protein; Arsr Family Transcriptional Regulator; Transcription Regulator; Transcriptional Regulatory Protein Asrr; Transcriptional Regulator ArsR-Family; HTH Family Transcriptional Regulator; ArsR Family Protein Transcriptional Regulator

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MLNHQAALDPILHAIADPTRRGMVEQLAKGPASVSALAGRLPMSLQAAMQHLAVLEAAEVVRSEKVGRVRTVSLNPAALH
QVERWVAEQKKAWERRLDRLGDYLGESPGNERNDHG

Sequences:

>Translated_116_residues
MLNHQAALDPILHAIADPTRRGMVEQLAKGPASVSALAGRLPMSLQAAMQHLAVLEAAEVVRSEKVGRVRTVSLNPAALH
QVERWVAEQKKAWERRLDRLGDYLGESPGNERNDHG
>Mature_116_residues
MLNHQAALDPILHAIADPTRRGMVEQLAKGPASVSALAGRLPMSLQAAMQHLAVLEAAEVVRSEKVGRVRTVSLNPAALH
QVERWVAEQKKAWERRLDRLGDYLGESPGNERNDHG

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12732; Mature: 12732

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNHQAALDPILHAIADPTRRGMVEQLAKGPASVSALAGRLPMSLQAAMQHLAVLEAAEV
CCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VRSEKVGRVRTVSLNPAALHQVERWVAEQKKAWERRLDRLGDYLGESPGNERNDHG
HHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLNHQAALDPILHAIADPTRRGMVEQLAKGPASVSALAGRLPMSLQAAMQHLAVLEAAEV
CCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VRSEKVGRVRTVSLNPAALHQVERWVAEQKKAWERRLDRLGDYLGESPGNERNDHG
HHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA