| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
Click here to switch to the map view.
The map label for this gene is 103487286
Identifier: 103487286
GI number: 103487286
Start: 1897996
End: 1898346
Strand: Reverse
Name: 103487286
Synonym: Sala_1802
Alternate gene names: NA
Gene position: 1898346-1897996 (Counterclockwise)
Preceding gene: 103487287
Following gene: 103487285
Centisome position: 56.75
GC content: 67.52
Gene sequence:
>351_bases ATGCTTAACCATCAGGCCGCGCTCGATCCGATTCTTCATGCCATCGCCGACCCGACGCGGCGGGGCATGGTCGAACAGCT TGCCAAGGGGCCGGCATCGGTCAGCGCGCTCGCCGGGCGGCTGCCGATGTCGCTGCAGGCGGCGATGCAGCATCTCGCGG TGCTCGAAGCCGCCGAGGTGGTGCGCAGCGAGAAGGTCGGCCGGGTGCGGACGGTGTCGCTGAACCCCGCCGCGCTCCAC CAGGTCGAACGCTGGGTGGCCGAGCAGAAGAAAGCCTGGGAGCGCCGACTCGACCGGCTCGGTGACTATCTGGGCGAATC CCCCGGAAATGAAAGGAATGACCATGGCTGA
Upstream 100 bases:
>100_bases GTCGGCGACGCCTCGCCGCGCGCAGCGGCGACGGCCCGCCTTCCGGATAATAGTCAATTACTCACTTGACTATTATCCGG TCGCGTGATTAGTCAAGTGA
Downstream 100 bases:
>100_bases CAGCCCGATCCACCACGCCAGCTTTTCCGTCGAACGCGCCTATCGTTCGCCGCGTCAACGGGTTTTCGCCGCCTTCACCA GTGCCGAGGCGCGGCGCCGC
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator; Transcriptional Regulator ArsR Family Protein; Transcriptional Regulator Arsr Family; Transcriptional Regulator Protein; Regulatory Protein Arsr; ArsR-Family Transcriptional Regulator; ArsR Family Regulatory; Transcriptional Regulator Protein ArsR Family; Transcriptional Regulatory Protein; Transcriptional Regulator TrmB; Transcriptional Regulatory ArsR Family; Transcription Regulator ArsR; ArsR Family Transcriptional Regulatory Protein; Arsr Family Transcriptional Regulator; Transcription Regulator; Transcriptional Regulatory Protein Asrr; Transcriptional Regulator ArsR-Family; HTH Family Transcriptional Regulator; ArsR Family Protein Transcriptional Regulator
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MLNHQAALDPILHAIADPTRRGMVEQLAKGPASVSALAGRLPMSLQAAMQHLAVLEAAEVVRSEKVGRVRTVSLNPAALH QVERWVAEQKKAWERRLDRLGDYLGESPGNERNDHG
Sequences:
>Translated_116_residues MLNHQAALDPILHAIADPTRRGMVEQLAKGPASVSALAGRLPMSLQAAMQHLAVLEAAEVVRSEKVGRVRTVSLNPAALH QVERWVAEQKKAWERRLDRLGDYLGESPGNERNDHG >Mature_116_residues MLNHQAALDPILHAIADPTRRGMVEQLAKGPASVSALAGRLPMSLQAAMQHLAVLEAAEVVRSEKVGRVRTVSLNPAALH QVERWVAEQKKAWERRLDRLGDYLGESPGNERNDHG
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12732; Mature: 12732
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNHQAALDPILHAIADPTRRGMVEQLAKGPASVSALAGRLPMSLQAAMQHLAVLEAAEV CCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VRSEKVGRVRTVSLNPAALHQVERWVAEQKKAWERRLDRLGDYLGESPGNERNDHG HHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MLNHQAALDPILHAIADPTRRGMVEQLAKGPASVSALAGRLPMSLQAAMQHLAVLEAAEV CCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VRSEKVGRVRTVSLNPAALHQVERWVAEQKKAWERRLDRLGDYLGESPGNERNDHG HHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA