Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is ppk [H]

Identifier: 103487239

GI number: 103487239

Start: 1847844

End: 1850012

Strand: Reverse

Name: ppk [H]

Synonym: Sala_1754

Alternate gene names: 103487239

Gene position: 1850012-1847844 (Counterclockwise)

Preceding gene: 103487240

Following gene: 103487238

Centisome position: 55.3

GC content: 63.49

Gene sequence:

>2169_bases
ATGTCGATAACCGGTGGCCCCTTGCGGGCCGAAAATGACCAGGAAACCGGATTTCCGTCGTTCGGCCCCGAACGCTTTTT
CAATCGCGAACTGTCATGGCTCGCTTTCAACCGCCGGGTGATGGAGGAGGCGCGCAATCCCGCGCATCCGCTCCTCGAAC
GTCTGCGTTTCCTGTCGATTTCGGGAAGCAATCTCGACGAGTTCTTCATGGTCCGCGTCGCCGGGCTGAAGGGGCAGCAG
CTTCAGGGGATCGACGATCCCTCGGCCGACGGCCGCTCGCCGGGCCAGCAGCTTGCCGAGATCGAGGCCGAGGTGAACCG
CCTCGTCGACCAGCAGCAAAGCGAGTGGCAGCGGCTGCACCGCCAGCTCGCCGAACAGGGCATCGTCGTCCACGGCGCCG
GATCGGACAAGGAAGCGCTGCGCACCAGTCTGCGCCAGTATTTCATCGACCAGATTTTCCCCATATTGACGCCGCAGGTA
CTCGATCCCGCGCATCCCTTTCCCTTCATTCCCAACCGCGGCCTCGGCGTGATTTTCGACCTTCAGCGGCGGGCCAGCGG
CGACACCGTGCTCGAACTGGTGATGATCCCGGCCTCGCTGCCGCGTTTCGTTCCGGTGCCGGGTGAGGCGAGCGGTTTTG
TTCCGGTCGAATATCTGATCGAATTGTTCGGCGACCTGCTGTTCCCCGGCTTCACCATCCGCTCGCTGGGCGTCTTTCGC
ATCATCCGCGACAGCGACATCGAGCTGGAGGAAGAGGCCGAGGATCTCGTCCGCCTGTTCCGCACCGCAATCCGTCGCCG
CCGCCGCGGCCGCGTGATCCTGATGGAGCTGGAGGCCGACATGCCAGCAGAAATCGCCGCGGTGCTGGGCGCCGACATTC
AGGGGCACGAGGCGATCGTGGCCAAGATCGGCGGCTTCATCGGCCTCGCCGCGCTTTCGGCGCTCGTCGACGTCGATCGT
CCCGACCTCAAGTTTCCGGCCTATTCGCCGCGCTTTCCCGAACGCATCCGCGAACATGGCGGCGACTGTTTCGCGGCGAT
CCGGTCGAAGGACATCGTCGTCCATCATCCTTATGAAAGTTTCGACGTCGTCCTGTCCTTTCTGCGGCAGGCGGCGGCCG
ATCCCGATGTCGTCGCGATCAAGCAGACGCTCTATCGCGCGGGCAACCAGTCGCCGGTCATCCGCGCGCTGATCGAGGCG
GCCGAGGCGGGCAAGTCGGTCACGGCGGTGGTCGAACTCAAGGCGCGTTTCGACGAGGAACAGAATCTGCTCTGGGCGAA
CCAGCTCGAACGCGCGGGGGTGCAGGTCGTCTACGGCTTCATCGAGTGGAAAACGCATGCCAAGATTTCGATGGTCGTGC
GGCGCGAGGGGCAGGGCTATCGCACCTATTGTCACTTCGGCACCGGCAATTATCATCCGGTGACCGCGCGCATCTATACC
GACCTCAGCTTCTTTACCGCCGATCCGCGCGCGGGGCGCGACGCGGCGCAACTCTTCAACTACATCACCGGCTATGTCGA
ACCCGAACGGCTCGAGCTTATCACCATGTCGCCGCTGAACATGCGCCAGCATCTTTGCGAACTGATCGACGCCGAAATCG
TGGCGGCCCGGTCGGGGCGCCCTTCGGGCGTATGGGCCAAGATGAACAGCATTGTCGACCCCGACATCATCGACAAGCTT
TACGAGGCGAGCGCGGCGGGTGTGCCGATCGAGCTGATCGTGCGCGGCATCTGTTGCCTGCGCCCAGGCGTCCCCGGCCT
GTCCGACACGATCCGCGTCAAGTCGGTCGTCGGTCGCTTCCTCGAACATAGCCGCGTCTGGGCCTTTGCCAATGGCGCCG
CGCTGCCGCATCGCGCGGCGCGGCTTTACATCTCCAGCGCCGACTGGATGCCGCGCAATTTCGACCGCCGCGTCGAATAT
ATGATCCCGATCGAAAATCCGACCGTTCACGACCAGATCCTCGACCAGGTGCTCGTCGCCAATCTGATCGACAATGAACA
AAGCTGGATATTGCAGGCGGATGGCACGTCGGTGCGCGTGGCGCCCGGCGACAAGCCCTTTAACCTGCACCATTATTTCA
TGAACAACCCGTCGCTGTCGGGTCGCGGCACCGCGCTTCACCAGCGTCAGGACGTGCCGACGCTCGCCTACGACCTTCGC
GAAGATTGA

Upstream 100 bases:

>100_bases
TCGAACAGGGGCGCCGCCTTGGCGTCCGTCTCGCGCGTGAAACATTGCTGTCACAAGGGCTGATCGACCCCGATCTCCTC
GAAAGGCAGGATGAAGACCA

Downstream 100 bases:

>100_bases
GACGAAACGGCTTGGCCCTGCTGCGCACCTCGAAACCGGCGGTTCATCGCTCGGCGGTCATCGACATCGGCTCCAACTCG
GTCCGCCTCGTCGTTTATGA

Product: polyphosphate kinase

Products: NA

Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase [H]

Number of amino acids: Translated: 722; Mature: 721

Protein sequence:

>722_residues
MSITGGPLRAENDQETGFPSFGPERFFNRELSWLAFNRRVMEEARNPAHPLLERLRFLSISGSNLDEFFMVRVAGLKGQQ
LQGIDDPSADGRSPGQQLAEIEAEVNRLVDQQQSEWQRLHRQLAEQGIVVHGAGSDKEALRTSLRQYFIDQIFPILTPQV
LDPAHPFPFIPNRGLGVIFDLQRRASGDTVLELVMIPASLPRFVPVPGEASGFVPVEYLIELFGDLLFPGFTIRSLGVFR
IIRDSDIELEEEAEDLVRLFRTAIRRRRRGRVILMELEADMPAEIAAVLGADIQGHEAIVAKIGGFIGLAALSALVDVDR
PDLKFPAYSPRFPERIREHGGDCFAAIRSKDIVVHHPYESFDVVLSFLRQAAADPDVVAIKQTLYRAGNQSPVIRALIEA
AEAGKSVTAVVELKARFDEEQNLLWANQLERAGVQVVYGFIEWKTHAKISMVVRREGQGYRTYCHFGTGNYHPVTARIYT
DLSFFTADPRAGRDAAQLFNYITGYVEPERLELITMSPLNMRQHLCELIDAEIVAARSGRPSGVWAKMNSIVDPDIIDKL
YEASAAGVPIELIVRGICCLRPGVPGLSDTIRVKSVVGRFLEHSRVWAFANGAALPHRAARLYISSADWMPRNFDRRVEY
MIPIENPTVHDQILDQVLVANLIDNEQSWILQADGTSVRVAPGDKPFNLHHYFMNNPSLSGRGTALHQRQDVPTLAYDLR
ED

Sequences:

>Translated_722_residues
MSITGGPLRAENDQETGFPSFGPERFFNRELSWLAFNRRVMEEARNPAHPLLERLRFLSISGSNLDEFFMVRVAGLKGQQ
LQGIDDPSADGRSPGQQLAEIEAEVNRLVDQQQSEWQRLHRQLAEQGIVVHGAGSDKEALRTSLRQYFIDQIFPILTPQV
LDPAHPFPFIPNRGLGVIFDLQRRASGDTVLELVMIPASLPRFVPVPGEASGFVPVEYLIELFGDLLFPGFTIRSLGVFR
IIRDSDIELEEEAEDLVRLFRTAIRRRRRGRVILMELEADMPAEIAAVLGADIQGHEAIVAKIGGFIGLAALSALVDVDR
PDLKFPAYSPRFPERIREHGGDCFAAIRSKDIVVHHPYESFDVVLSFLRQAAADPDVVAIKQTLYRAGNQSPVIRALIEA
AEAGKSVTAVVELKARFDEEQNLLWANQLERAGVQVVYGFIEWKTHAKISMVVRREGQGYRTYCHFGTGNYHPVTARIYT
DLSFFTADPRAGRDAAQLFNYITGYVEPERLELITMSPLNMRQHLCELIDAEIVAARSGRPSGVWAKMNSIVDPDIIDKL
YEASAAGVPIELIVRGICCLRPGVPGLSDTIRVKSVVGRFLEHSRVWAFANGAALPHRAARLYISSADWMPRNFDRRVEY
MIPIENPTVHDQILDQVLVANLIDNEQSWILQADGTSVRVAPGDKPFNLHHYFMNNPSLSGRGTALHQRQDVPTLAYDLR
ED
>Mature_721_residues
SITGGPLRAENDQETGFPSFGPERFFNRELSWLAFNRRVMEEARNPAHPLLERLRFLSISGSNLDEFFMVRVAGLKGQQL
QGIDDPSADGRSPGQQLAEIEAEVNRLVDQQQSEWQRLHRQLAEQGIVVHGAGSDKEALRTSLRQYFIDQIFPILTPQVL
DPAHPFPFIPNRGLGVIFDLQRRASGDTVLELVMIPASLPRFVPVPGEASGFVPVEYLIELFGDLLFPGFTIRSLGVFRI
IRDSDIELEEEAEDLVRLFRTAIRRRRRGRVILMELEADMPAEIAAVLGADIQGHEAIVAKIGGFIGLAALSALVDVDRP
DLKFPAYSPRFPERIREHGGDCFAAIRSKDIVVHHPYESFDVVLSFLRQAAADPDVVAIKQTLYRAGNQSPVIRALIEAA
EAGKSVTAVVELKARFDEEQNLLWANQLERAGVQVVYGFIEWKTHAKISMVVRREGQGYRTYCHFGTGNYHPVTARIYTD
LSFFTADPRAGRDAAQLFNYITGYVEPERLELITMSPLNMRQHLCELIDAEIVAARSGRPSGVWAKMNSIVDPDIIDKLY
EASAAGVPIELIVRGICCLRPGVPGLSDTIRVKSVVGRFLEHSRVWAFANGAALPHRAARLYISSADWMPRNFDRRVEYM
IPIENPTVHDQILDQVLVANLIDNEQSWILQADGTSVRVAPGDKPFNLHHYFMNNPSLSGRGTALHQRQDVPTLAYDLRE
D

Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) [H]

COG id: COG0855

COG function: function code P; Polyphosphate kinase

Gene ontology:

Cell location: Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyphosphate kinase family [H]

Homologues:

Organism=Escherichia coli, GI1788847, Length=654, Percent_Identity=34.8623853211009, Blast_Score=375, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003414 [H]

Pfam domain/function: PF02503 PP_kinase [H]

EC number: =2.7.4.1 [H]

Molecular weight: Translated: 80879; Mature: 80748

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSITGGPLRAENDQETGFPSFGPERFFNRELSWLAFNRRVMEEARNPAHPLLERLRFLSI
CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
SGSNLDEFFMVRVAGLKGQQLQGIDDPSADGRSPGQQLAEIEAEVNRLVDQQQSEWQRLH
CCCCHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQLAEQGIVVHGAGSDKEALRTSLRQYFIDQIFPILTPQVLDPAHPFPFIPNRGLGVIFD
HHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCEEEEE
LQRRASGDTVLELVMIPASLPRFVPVPGEASGFVPVEYLIELFGDLLFPGFTIRSLGVFR
ECCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCEEE
IIRDSDIELEEEAEDLVRLFRTAIRRRRRGRVILMELEADMPAEIAAVLGADIQGHEAIV
EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCCCHHHH
AKIGGFIGLAALSALVDVDRPDLKFPAYSPRFPERIREHGGDCFAAIRSKDIVVHHPYES
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCEEEHHCCCCEEEECCCHH
FDVVLSFLRQAAADPDVVAIKQTLYRAGNQSPVIRALIEAAEAGKSVTAVVELKARFDEE
HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEHHHCCCC
QNLLWANQLERAGVQVVYGFIEWKTHAKISMVVRREGQGYRTYCHFGTGNYHPVTARIYT
CCCHHHHHHHHCCCEEEEEEHHCCCCCEEEEEEEECCCCCEEEEEECCCCCCEEEEEEEE
DLSFFTADPRAGRDAAQLFNYITGYVEPERLELITMSPLNMRQHLCELIDAEIVAARSGR
CCCEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHEEECCCC
PSGVWAKMNSIVDPDIIDKLYEASAAGVPIELIVRGICCLRPGVPGLSDTIRVKSVVGRF
CCCHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LEHSRVWAFANGAALPHRAARLYISSADWMPRNFDRRVEYMIPIENPTVHDQILDQVLVA
HHHCCEEEEECCCCCCCHHHEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
NLIDNEQSWILQADGTSVRVAPGDKPFNLHHYFMNNPSLSGRGTALHQRQDVPTLAYDLR
HHHCCCCCEEEEECCCEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHCCCCCHHHHHCC
ED
CC
>Mature Secondary Structure 
SITGGPLRAENDQETGFPSFGPERFFNRELSWLAFNRRVMEEARNPAHPLLERLRFLSI
CCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
SGSNLDEFFMVRVAGLKGQQLQGIDDPSADGRSPGQQLAEIEAEVNRLVDQQQSEWQRLH
CCCCHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQLAEQGIVVHGAGSDKEALRTSLRQYFIDQIFPILTPQVLDPAHPFPFIPNRGLGVIFD
HHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCEEEEE
LQRRASGDTVLELVMIPASLPRFVPVPGEASGFVPVEYLIELFGDLLFPGFTIRSLGVFR
ECCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCEEE
IIRDSDIELEEEAEDLVRLFRTAIRRRRRGRVILMELEADMPAEIAAVLGADIQGHEAIV
EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCCCHHHH
AKIGGFIGLAALSALVDVDRPDLKFPAYSPRFPERIREHGGDCFAAIRSKDIVVHHPYES
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCEEEHHCCCCEEEECCCHH
FDVVLSFLRQAAADPDVVAIKQTLYRAGNQSPVIRALIEAAEAGKSVTAVVELKARFDEE
HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEHHHCCCC
QNLLWANQLERAGVQVVYGFIEWKTHAKISMVVRREGQGYRTYCHFGTGNYHPVTARIYT
CCCHHHHHHHHCCCEEEEEEHHCCCCCEEEEEEEECCCCCEEEEEECCCCCCEEEEEEEE
DLSFFTADPRAGRDAAQLFNYITGYVEPERLELITMSPLNMRQHLCELIDAEIVAARSGR
CCCEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHEEECCCC
PSGVWAKMNSIVDPDIIDKLYEASAAGVPIELIVRGICCLRPGVPGLSDTIRVKSVVGRF
CCCHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LEHSRVWAFANGAALPHRAARLYISSADWMPRNFDRRVEYMIPIENPTVHDQILDQVLVA
HHHCCEEEEECCCCCCCHHHEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
NLIDNEQSWILQADGTSVRVAPGDKPFNLHHYFMNNPSLSGRGTALHQRQDVPTLAYDLR
HHHCCCCCEEEEECCCEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHCCCCCHHHHHCC
ED
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA