| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is cheA [H]
Identifier: 103487225
GI number: 103487225
Start: 1831709
End: 1834132
Strand: Reverse
Name: cheA [H]
Synonym: Sala_1740
Alternate gene names: 103487225
Gene position: 1834132-1831709 (Counterclockwise)
Preceding gene: 103487226
Following gene: 103487224
Centisome position: 54.83
GC content: 69.18
Gene sequence:
>2424_bases TTGCTGGGGCGCACCGATACGGCGATGGACGATCTACTGAACGAGTTTCTGGCCGAGACGGCCGAAATCCTGTCCGATGC GGGCGGGGCGATCGTGGCGTGGGAGGCCGACCCTGCCGACCGCGCGCAGCTCGACGCCATTTTCCGCCTCGTCCACACGA TCAAGGGCAGCTCGGGCTTTCTGGCGCTACCGCGCGTCACCGCGCTGGCGCACGCCGCCGAGGATGCGCTCGACCAGGTG CGCCGCGGCCACCGCGCCGCCGACGCCGCGCTCGTGTCGGGCGTGCTGGCGGTTATCGACCGGCTCAACGCGCTATGTGT AACGCTCGGGCAGGACGGCACCGAACCGGTCGGTGACGACCGCGACGTCATCGGCGCGCTGTCGCCGCGGGAGGAGCAAG CGTCCGCGCCCGCGCCCGTCCAGGTTGCGGGCGTTCCCATGCGCCGTGAGGAGGATGTCGGTGCCGACCCCAACGGGTGG CGGTCGATCCGCGTGCCGTTGCCCTTGCTCGACAGCGTGATGACCGGCGTCACCGACATCGTGCTGGCGCGCAACGAATT TGCGCGAATGCTGCGCGAATCGGGCGCCGACAGCGCGACGATCGCGGCGTTCGATCGCCTGTCCGATTCGATCGCGGCGA TGCGCCAGTCGGTCAGCCAGATGCGGATGCAGCGCATCGACAAATTGTTCGCGCCGCTGCCGCGCATCGTCCGCGACCTG GCGCAGGAACTGGGCAAGAAGATCGCGTTCCAGACGAGCGGCGGCGAAGTCGAACTCGACCGCGAAATGATGGAGAATAT CCGCGATCCGCTGATCCACATCGTGCGCAACGCGATCGACCATGGTATCGAGACGCTTGACGATCGCGTCGCCGCCGGAA AGGATATCACCGCGACGATTTCGGTCGCGGCGCGCCAGTCGGGCAACCAGATCGAGATCGAGGTGCGCGACGACGGCCGC GGGCTGTCGCCCGAGGCACTGGTCGCCAAGGCGGTCGCGTCGCGCCTGCTGACCGCAGCCGACGCCCGCGCGCTGTCGCC CAGGGAAAAGCTCGAACTCATCTTCCGCCCCGGATTTTCGACCGCCGCAAAGGTTACCGAGGTTTCGGGCCGCGGGGTGG GCATGGACATCGTCAAGGCGAATGTCGAGAAGATCGGGGGAGTCGTCGACATACGCAATGACGAAGGCCGCGGGCTGGCC ATCCTGTTGCGCGTGCCGATGACGCTGACGATCATATCGGGGCTGATGGTGCGCGCGGCGGGGCAGTATTTCGCGATCCC GCGCGGCGCGGTGCGCGAAGTCCTGCTCGAAAGCGGCGATACGGTCCGCATCGACCGCGTCGGCGGCGGCGAGCTGGCGA CCGTGCGCGGCGAGCAATTTCCGCTGCTGCGCCTCGAAAACCTCCTCGGCTGCGCGCGTGCCGCGGATGACGGGGAAGAC GACCGCGCGCTGGTGATCGTGCGGCCGGGGCAGGGACAGAGCTATGCGCTGAGCGTCGCGGCGATCCACGACCATGAGGA GCTGGTGATCAAGCCGGCGGCGCCGATGATCATGGCGACGGGACTTTATGCGGGCACGACGCTGCCCGACAACGGTCGCC CGGTCCTCCTCCTCGACGTCCAGGGGCTGCTTGCGGTCGCCGGGGTCGATGCGAGCGAAGCCGGGCGCAGCAAGGACGGG CTGGCCGACGCCGAAGCCGAGGCGGCCGCGACGCGCGATGCGACGCAGCTGTTGCTGTTCCGCGACATGGACGAGCGGGT GCGCGGCATCCGCCTGTCGGTGATCGAGCGCGTCGAGGACGTCCCGCTCCCGGCACTTTTCGAAAGCGCCGGTCGCGTGC AGGCAAAGATCGGCGAAGAGATTTTCCCGGTCCACGCCGCCCGGCCGCCGGTCGGGACGGGCCATATCAAGCTCCTCCGC CTCCACGACGGCCGTTCGGTGCTCTGCTACCCGATCGCCGAGGTCATCGACATCGTCCGCCTGCCCGATGCGATCCAGCC GTCGGGCGTGCCGGGGCTGATCGCGGGCGTCGTGCTGATCGGCGGCGCGCCGGTCGAACTGATCGACCCCTTCTGGCTGA TGGAGCAACAGGCCGCCCGATCGCTCCCGCTGCCGCGGCGCGAACCGCTGTGTCACCTTGCCGACGACCATGACGGCTGG GGCGTCAATTTCCTGGCGCCGATCCTGCGCGGCGCCGGATATCGCGTCACGCTGGCGGCCGAGACCGCCGACGAAACCCC CGACCTGCTGCTCTGCCTGTCCGACGACGGCGAGTTGTGCGGCCATGCCGCGGGCGATGTGCCCATGATCCGCCTGCGAT CCTCGATCGAGGCGGCGGCGCCCGACGACCAGAGCGTCTATCGTTACGACCGCGAAGCGCTGCTTGCCGCGATGCGCCGC CGCGTCGGAGGAGCGCGGCCATGA
Upstream 100 bases:
>100_bases CTGGCGCGCGAAACGCCGACCTCGCTGCTCGTCGGCGCGGTGCTGCGCGCGCGCGGGTAAAGCCACTTTTAACCATTGCC CGCCATGGTGGCGTCTCAAG
Downstream 100 bases:
>100_bases TGGACAAACTCTATCTGATCGCGCGCATCGCCGACACGCGCGTCGCGCTGCGCAGCCGCGCGATCCATTCGGTGGTGACT GTCGGCACGCCGGTCGAGGT
Product: CheA signal transduction histidine kinases
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 807; Mature: 807
Protein sequence:
>807_residues MLGRTDTAMDDLLNEFLAETAEILSDAGGAIVAWEADPADRAQLDAIFRLVHTIKGSSGFLALPRVTALAHAAEDALDQV RRGHRAADAALVSGVLAVIDRLNALCVTLGQDGTEPVGDDRDVIGALSPREEQASAPAPVQVAGVPMRREEDVGADPNGW RSIRVPLPLLDSVMTGVTDIVLARNEFARMLRESGADSATIAAFDRLSDSIAAMRQSVSQMRMQRIDKLFAPLPRIVRDL AQELGKKIAFQTSGGEVELDREMMENIRDPLIHIVRNAIDHGIETLDDRVAAGKDITATISVAARQSGNQIEIEVRDDGR GLSPEALVAKAVASRLLTAADARALSPREKLELIFRPGFSTAAKVTEVSGRGVGMDIVKANVEKIGGVVDIRNDEGRGLA ILLRVPMTLTIISGLMVRAAGQYFAIPRGAVREVLLESGDTVRIDRVGGGELATVRGEQFPLLRLENLLGCARAADDGED DRALVIVRPGQGQSYALSVAAIHDHEELVIKPAAPMIMATGLYAGTTLPDNGRPVLLLDVQGLLAVAGVDASEAGRSKDG LADAEAEAAATRDATQLLLFRDMDERVRGIRLSVIERVEDVPLPALFESAGRVQAKIGEEIFPVHAARPPVGTGHIKLLR LHDGRSVLCYPIAEVIDIVRLPDAIQPSGVPGLIAGVVLIGGAPVELIDPFWLMEQQAARSLPLPRREPLCHLADDHDGW GVNFLAPILRGAGYRVTLAAETADETPDLLLCLSDDGELCGHAAGDVPMIRLRSSIEAAAPDDQSVYRYDREALLAAMRR RVGGARP
Sequences:
>Translated_807_residues MLGRTDTAMDDLLNEFLAETAEILSDAGGAIVAWEADPADRAQLDAIFRLVHTIKGSSGFLALPRVTALAHAAEDALDQV RRGHRAADAALVSGVLAVIDRLNALCVTLGQDGTEPVGDDRDVIGALSPREEQASAPAPVQVAGVPMRREEDVGADPNGW RSIRVPLPLLDSVMTGVTDIVLARNEFARMLRESGADSATIAAFDRLSDSIAAMRQSVSQMRMQRIDKLFAPLPRIVRDL AQELGKKIAFQTSGGEVELDREMMENIRDPLIHIVRNAIDHGIETLDDRVAAGKDITATISVAARQSGNQIEIEVRDDGR GLSPEALVAKAVASRLLTAADARALSPREKLELIFRPGFSTAAKVTEVSGRGVGMDIVKANVEKIGGVVDIRNDEGRGLA ILLRVPMTLTIISGLMVRAAGQYFAIPRGAVREVLLESGDTVRIDRVGGGELATVRGEQFPLLRLENLLGCARAADDGED DRALVIVRPGQGQSYALSVAAIHDHEELVIKPAAPMIMATGLYAGTTLPDNGRPVLLLDVQGLLAVAGVDASEAGRSKDG LADAEAEAAATRDATQLLLFRDMDERVRGIRLSVIERVEDVPLPALFESAGRVQAKIGEEIFPVHAARPPVGTGHIKLLR LHDGRSVLCYPIAEVIDIVRLPDAIQPSGVPGLIAGVVLIGGAPVELIDPFWLMEQQAARSLPLPRREPLCHLADDHDGW GVNFLAPILRGAGYRVTLAAETADETPDLLLCLSDDGELCGHAAGDVPMIRLRSSIEAAAPDDQSVYRYDREALLAAMRR RVGGARP >Mature_807_residues MLGRTDTAMDDLLNEFLAETAEILSDAGGAIVAWEADPADRAQLDAIFRLVHTIKGSSGFLALPRVTALAHAAEDALDQV RRGHRAADAALVSGVLAVIDRLNALCVTLGQDGTEPVGDDRDVIGALSPREEQASAPAPVQVAGVPMRREEDVGADPNGW RSIRVPLPLLDSVMTGVTDIVLARNEFARMLRESGADSATIAAFDRLSDSIAAMRQSVSQMRMQRIDKLFAPLPRIVRDL AQELGKKIAFQTSGGEVELDREMMENIRDPLIHIVRNAIDHGIETLDDRVAAGKDITATISVAARQSGNQIEIEVRDDGR GLSPEALVAKAVASRLLTAADARALSPREKLELIFRPGFSTAAKVTEVSGRGVGMDIVKANVEKIGGVVDIRNDEGRGLA ILLRVPMTLTIISGLMVRAAGQYFAIPRGAVREVLLESGDTVRIDRVGGGELATVRGEQFPLLRLENLLGCARAADDGED DRALVIVRPGQGQSYALSVAAIHDHEELVIKPAAPMIMATGLYAGTTLPDNGRPVLLLDVQGLLAVAGVDASEAGRSKDG LADAEAEAAATRDATQLLLFRDMDERVRGIRLSVIERVEDVPLPALFESAGRVQAKIGEEIFPVHAARPPVGTGHIKLLR LHDGRSVLCYPIAEVIDIVRLPDAIQPSGVPGLIAGVVLIGGAPVELIDPFWLMEQQAARSLPLPRREPLCHLADDHDGW GVNFLAPILRGAGYRVTLAAETADETPDLLLCLSDDGELCGHAAGDVPMIRLRSSIEAAAPDDQSVYRYDREALLAAMRR RVGGARP
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheA is autophosphorylated; it can transfer its phosphate group to either CheB or CheY [H]
COG id: COG0643
COG function: function code NT; Chemotaxis protein histidine kinase and related kinases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HPt domain [H]
Homologues:
Organism=Escherichia coli, GI1788197, Length=405, Percent_Identity=37.2839506172839, Blast_Score=225, Evalue=9e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002545 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR004105 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR010808 [H]
Pfam domain/function: PF01584 CheW; PF02895 H-kinase_dim; PF02518 HATPase_c; PF01627 Hpt; PF07194 P2 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 86246; Mature: 86246
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS50851 CHEW ; PS50894 HPT ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGRTDTAMDDLLNEFLAETAEILSDAGGAIVAWEADPADRAQLDAIFRLVHTIKGSSGF CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC LALPRVTALAHAAEDALDQVRRGHRAADAALVSGVLAVIDRLNALCVTLGQDGTEPVGDD EEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCC RDVIGALSPREEQASAPAPVQVAGVPMRREEDVGADPNGWRSIRVPLPLLDSVMTGVTDI CHHHCCCCCCHHHCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHH VLARNEFARMLRESGADSATIAAFDRLSDSIAAMRQSVSQMRMQRIDKLFAPLPRIVRDL HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQELGKKIAFQTSGGEVELDREMMENIRDPLIHIVRNAIDHGIETLDDRVAAGKDITATI HHHHHHHEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE SVAARQSGNQIEIEVRDDGRGLSPEALVAKAVASRLLTAADARALSPREKLELIFRPGFS EEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCC TAAKVTEVSGRGVGMDIVKANVEKIGGVVDIRNDEGRGLAILLRVPMTLTIISGLMVRAA CHHHHEECCCCCCCHHHHHHHHHHHCCEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHC GQYFAIPRGAVREVLLESGDTVRIDRVGGGELATVRGEQFPLLRLENLLGCARAADDGED CCEEECCHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCC DRALVIVRPGQGQSYALSVAAIHDHEELVIKPAAPMIMATGLYAGTTLPDNGRPVLLLDV CCEEEEEECCCCCCEEEEEEEEECCCEEEEECCCCHHEECCCCCCCCCCCCCCEEEEEEC QGLLAVAGVDASEAGRSKDGLADAEAEAAATRDATQLLLFRDMDERVRGIRLSVIERVED CCHHHEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC VPLPALFESAGRVQAKIGEEIFPVHAARPPVGTGHIKLLRLHDGRSVLCYPIAEVIDIVR CCCHHHHHHCCCHHHHHCCHHEECCCCCCCCCCCCEEEEEEECCCEEEEHHHHHHHHHHH LPDAIQPSGVPGLIAGVVLIGGAPVELIDPFWLMEQQAARSLPLPRREPLCHLADDHDGW CCCCCCCCCCCHHHHHHHHCCCCCHHHHCHHHHHHHHHHHCCCCCCCCCCCEECCCCCCC GVNFLAPILRGAGYRVTLAAETADETPDLLLCLSDDGELCGHAAGDVPMIRLRSSIEAAA CHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCC PDDQSVYRYDREALLAAMRRRVGGARP CCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLGRTDTAMDDLLNEFLAETAEILSDAGGAIVAWEADPADRAQLDAIFRLVHTIKGSSGF CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC LALPRVTALAHAAEDALDQVRRGHRAADAALVSGVLAVIDRLNALCVTLGQDGTEPVGDD EEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCC RDVIGALSPREEQASAPAPVQVAGVPMRREEDVGADPNGWRSIRVPLPLLDSVMTGVTDI CHHHCCCCCCHHHCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHH VLARNEFARMLRESGADSATIAAFDRLSDSIAAMRQSVSQMRMQRIDKLFAPLPRIVRDL HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQELGKKIAFQTSGGEVELDREMMENIRDPLIHIVRNAIDHGIETLDDRVAAGKDITATI HHHHHHHEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE SVAARQSGNQIEIEVRDDGRGLSPEALVAKAVASRLLTAADARALSPREKLELIFRPGFS EEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCC TAAKVTEVSGRGVGMDIVKANVEKIGGVVDIRNDEGRGLAILLRVPMTLTIISGLMVRAA CHHHHEECCCCCCCHHHHHHHHHHHCCEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHC GQYFAIPRGAVREVLLESGDTVRIDRVGGGELATVRGEQFPLLRLENLLGCARAADDGED CCEEECCHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCC DRALVIVRPGQGQSYALSVAAIHDHEELVIKPAAPMIMATGLYAGTTLPDNGRPVLLLDV CCEEEEEECCCCCCEEEEEEEEECCCEEEEECCCCHHEECCCCCCCCCCCCCCEEEEEEC QGLLAVAGVDASEAGRSKDGLADAEAEAAATRDATQLLLFRDMDERVRGIRLSVIERVED CCHHHEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC VPLPALFESAGRVQAKIGEEIFPVHAARPPVGTGHIKLLRLHDGRSVLCYPIAEVIDIVR CCCHHHHHHCCCHHHHHCCHHEECCCCCCCCCCCCEEEEEEECCCEEEEHHHHHHHHHHH LPDAIQPSGVPGLIAGVVLIGGAPVELIDPFWLMEQQAARSLPLPRREPLCHLADDHDGW CCCCCCCCCCCHHHHHHHHCCCCCHHHHCHHHHHHHHHHHCCCCCCCCCCCEECCCCCCC GVNFLAPILRGAGYRVTLAAETADETPDLLLCLSDDGELCGHAAGDVPMIRLRSSIEAAA CHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCC PDDQSVYRYDREALLAAMRRRVGGARP CCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550470; 10360571; 9989504 [H]