Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487194

Identifier: 103487194

GI number: 103487194

Start: 1799155

End: 1800294

Strand: Reverse

Name: 103487194

Synonym: Sala_1709

Alternate gene names: NA

Gene position: 1800294-1799155 (Counterclockwise)

Preceding gene: 103487195

Following gene: 103487192

Centisome position: 53.82

GC content: 66.23

Gene sequence:

>1140_bases
ATGACCGACCTGCCCCAAACCAACCTGACCATGGTGACGCTCGTGAAGCCCGAAGGGCAGCTCGAAGTGTCGCTCGAACG
GCGGCCGATGCCCGAACCCAAGCCGCATGAGGTGGTGGTGAAGCTGCTCGCGGCGCCGATCAACCCGTCGGACCTGGGCC
TGCTGTTCGGCGGCGCGGACATGAGCACCGCGCGGGCGTCGGAGCGTGATGGGCTGCCCGTGCTGACCGCCGATGTGCCG
CCCGCGGGGATGCGCGCGATGGCGGGGCGCATCGGCGAGGCGATGGCGATCGGCAACGAAGGCTGCGGCATCGTTGTCGC
GGCGGGCGCATCGGCGGAGGCGCAGGCGCTGCTCGGCAAGACGGTCGCGGTGCTCGGCGGCGAAATGTATGCCGAATATC
GCTGCCTGCCGGTGCAGATGGCGATGCCACTGCCCGATGGGACCGATCCCAGGGACGGCGCTTCCTGTTTCGTCAACCCG
CTCACCAGCCTCGCCTTTACCGAAACGACGCGGATGGAGGGGCACAGCGCGATCGTCCACACCGCCGCGGCGTCGAACCT
GGGCCAGATGCTGGTCAAGATTTGCGCCAAGGACGGCATCCCGCTGGTCAACATCGTGCGCAGCGATGCGCAGGTCGCGC
TGCTGAAAGGCATCGGCGCGCAATATGTCGTGAACAGCAGCGCCGACGATTTCATGGACCGGCTGATCGACGCGATCGCC
GAAACGGGCGCGACGATCGGTTTCGACGCGACGGGCGGCGGCAAGCTGGCGGGGCAGATTTTGACCGCGATGGAGGCGGC
GGCGGTGCGGCGCATGACGAGCTACAGCCGCTATGGTTCCGACACGTTCAAACAGGTCTATATCTATGGCGCGCTCGACC
TGTCGCCGACGACTTTCTCGGCGCGCAGTTTCGGCCTGACCTGGGCGCTCGGCGGCTTTTTGCTGACGCCCTTTCTGGCG
AAGGCGGGGGCCGAGGTTGTCGGGCGGATGCGCCAGCGCGTCGTCGACGAACTGACCACGACCTTCAAGAGCCATTACAG
CCACGAAATCTCGCTGACCGAAGCGCTCGATGTCGAAACCGCGCAGGCCTATAATGCGAAGCGGACGGGCGAGAAATATC
TGATCCGCCCGCACGGATAA

Upstream 100 bases:

>100_bases
CGGGATAAGGACCAAATTTTCTTGGGAGGCGATTGCCAGCCTCGCCGCATCGCCCTATTCCCGTTGCATCCAGAAACTGA
AATGCGACGGGAGATGCGCG

Downstream 100 bases:

>100_bases
TCGAAAGGGCCCACCGGCGGCGGCCGGTGAGCCCTCGATTTCGGGAATGGGGGCCGGTGAACGGGGCGCCTTTGGCGACC
GGCCCTGGCTGCCTTATGGC

Product: alcohol dehydrogenase GroES-like protein

Products: NA

Alternate protein names: Alcohol Dehydrogenase; Alcohol Dehydrogenase GroES Domain Protein; Alcohol Dehydrogenase GroES-Like Protein; NADPHQuinone Reductase; Alcohol Dehydrogenase GroES-Like Domain Family; Zn-Dependent; Oxidoreductase; Alcohol Dehydrogenase GroES Domain-Containing Protein; NADH Oxidoreductas; Zn-Dependent Alcohol Dehydrogenase; Alcohol Dehydrogenase-Like Protein; Zn-Dependent Oxidoreductase; NADH Oxidoreductase-Like; Quinone Oxidoreductase

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MTDLPQTNLTMVTLVKPEGQLEVSLERRPMPEPKPHEVVVKLLAAPINPSDLGLLFGGADMSTARASERDGLPVLTADVP
PAGMRAMAGRIGEAMAIGNEGCGIVVAAGASAEAQALLGKTVAVLGGEMYAEYRCLPVQMAMPLPDGTDPRDGASCFVNP
LTSLAFTETTRMEGHSAIVHTAAASNLGQMLVKICAKDGIPLVNIVRSDAQVALLKGIGAQYVVNSSADDFMDRLIDAIA
ETGATIGFDATGGGKLAGQILTAMEAAAVRRMTSYSRYGSDTFKQVYIYGALDLSPTTFSARSFGLTWALGGFLLTPFLA
KAGAEVVGRMRQRVVDELTTTFKSHYSHEISLTEALDVETAQAYNAKRTGEKYLIRPHG

Sequences:

>Translated_379_residues
MTDLPQTNLTMVTLVKPEGQLEVSLERRPMPEPKPHEVVVKLLAAPINPSDLGLLFGGADMSTARASERDGLPVLTADVP
PAGMRAMAGRIGEAMAIGNEGCGIVVAAGASAEAQALLGKTVAVLGGEMYAEYRCLPVQMAMPLPDGTDPRDGASCFVNP
LTSLAFTETTRMEGHSAIVHTAAASNLGQMLVKICAKDGIPLVNIVRSDAQVALLKGIGAQYVVNSSADDFMDRLIDAIA
ETGATIGFDATGGGKLAGQILTAMEAAAVRRMTSYSRYGSDTFKQVYIYGALDLSPTTFSARSFGLTWALGGFLLTPFLA
KAGAEVVGRMRQRVVDELTTTFKSHYSHEISLTEALDVETAQAYNAKRTGEKYLIRPHG
>Mature_378_residues
TDLPQTNLTMVTLVKPEGQLEVSLERRPMPEPKPHEVVVKLLAAPINPSDLGLLFGGADMSTARASERDGLPVLTADVPP
AGMRAMAGRIGEAMAIGNEGCGIVVAAGASAEAQALLGKTVAVLGGEMYAEYRCLPVQMAMPLPDGTDPRDGASCFVNPL
TSLAFTETTRMEGHSAIVHTAAASNLGQMLVKICAKDGIPLVNIVRSDAQVALLKGIGAQYVVNSSADDFMDRLIDAIAE
TGATIGFDATGGGKLAGQILTAMEAAAVRRMTSYSRYGSDTFKQVYIYGALDLSPTTFSARSFGLTWALGGFLLTPFLAK
AGAEVVGRMRQRVVDELTTTFKSHYSHEISLTEALDVETAQAYNAKRTGEKYLIRPHG

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40055; Mature: 39923

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLPQTNLTMVTLVKPEGQLEVSLERRPMPEPKPHEVVVKLLAAPINPSDLGLLFGGAD
CCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCC
MSTARASERDGLPVLTADVPPAGMRAMAGRIGEAMAIGNEGCGIVVAAGASAEAQALLGK
CCHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHEEEECCCCCEEEEECCCCHHHHHHHHH
TVAVLGGEMYAEYRCLPVQMAMPLPDGTDPRDGASCFVNPLTSLAFTETTRMEGHSAIVH
HHHHHCCHHHHCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHEEE
TAAASNLGQMLVKICAKDGIPLVNIVRSDAQVALLKGIGAQYVVNSSADDFMDRLIDAIA
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEHHHCCCCEEEECCCHHHHHHHHHHHHH
ETGATIGFDATGGGKLAGQILTAMEAAAVRRMTSYSRYGSDTFKQVYIYGALDLSPTTFS
HCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCEEC
ARSFGLTWALGGFLLTPFLAKAGAEVVGRMRQRVVDELTTTFKSHYSHEISLTEALDVET
HHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCHH
AQAYNAKRTGEKYLIRPHG
HHHHCCCCCCCEEEEECCC
>Mature Secondary Structure 
TDLPQTNLTMVTLVKPEGQLEVSLERRPMPEPKPHEVVVKLLAAPINPSDLGLLFGGAD
CCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCC
MSTARASERDGLPVLTADVPPAGMRAMAGRIGEAMAIGNEGCGIVVAAGASAEAQALLGK
CCHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHEEEECCCCCEEEEECCCCHHHHHHHHH
TVAVLGGEMYAEYRCLPVQMAMPLPDGTDPRDGASCFVNPLTSLAFTETTRMEGHSAIVH
HHHHHCCHHHHCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHEEE
TAAASNLGQMLVKICAKDGIPLVNIVRSDAQVALLKGIGAQYVVNSSADDFMDRLIDAIA
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEHHHCCCCEEEECCCHHHHHHHHHHHHH
ETGATIGFDATGGGKLAGQILTAMEAAAVRRMTSYSRYGSDTFKQVYIYGALDLSPTTFS
HCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCEEC
ARSFGLTWALGGFLLTPFLAKAGAEVVGRMRQRVVDELTTTFKSHYSHEISLTEALDVET
HHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCHH
AQAYNAKRTGEKYLIRPHG
HHHHCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA