Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487195

Identifier: 103487195

GI number: 103487195

Start: 1800501

End: 1801067

Strand: Reverse

Name: 103487195

Synonym: Sala_1710

Alternate gene names: NA

Gene position: 1801067-1800501 (Counterclockwise)

Preceding gene: 103487198

Following gene: 103487194

Centisome position: 53.84

GC content: 69.84

Gene sequence:

>567_bases
TTGCCTTTCGATAACCAAATCGGTTTTTTCTTTCCTACACAATCATCCAATGTCAAGTCCTCTGTCCGTATCAAGGAGAC
CGACATGATCCCACGCCGCCTCGAATCGCGTATCCACCCCGACGACCGCCTCGATCCCGGCAAGACGGGGCCGCAGCTGA
TGCGGCATGTGACCGTCAATGCCGCCGAAAGCCCGATTGCCTGGCTGGCGTCGCGCGGGCTGCTGACCCCGGCGCAATTG
CTGGCGGGCGAGCGGCTGCGCGCCGATTATGAGCGCGCGGGGCTGGCGGCGCGGGTGACGATGCGCTGGGACGCCGCGCC
GCCGGGCAAGAGCCGCGGCGGCGCGCGCGCGGCCGATGCGTCGCTGGCGCGGATCGACGCGCACCGGCGCTTTCACGGCG
CGCTCGACGCGGCGGGGCCGGGGCTCGCCGACATTTGCTGGCGCGTGATCTGCGCGGGCGAGGGGATCGGCGGCGCCGAA
AAGGCGCTCGGCTGGCCCGCGCGATCGGGCAAGCTGGTGCTGGGGCTGGCGCTCGACCGCCTCGTGCGTTTTTACGGGAC
GGGGTAG

Upstream 100 bases:

>100_bases
ATCGTCTGCGCGGTGGTCGGCGGATCGCAGCGTTGCGCAACCTCCTCAAGCGTCAGCCCCTTGGCGCGGCGGACGGTTCG
GATGCTGTTGATCACGGCCT

Downstream 100 bases:

>100_bases
CCCGGAGAGCGTCATTGCGAGGAGCGAAGCGACGAAGCAATCTCCAGTGGGCGTCCGGTCGGTGCGATAGCTGGAGATTG
CTTCGCTGCGCTCGCAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MPFDNQIGFFFPTQSSNVKSSVRIKETDMIPRRLESRIHPDDRLDPGKTGPQLMRHVTVNAAESPIAWLASRGLLTPAQL
LAGERLRADYERAGLAARVTMRWDAAPPGKSRGGARAADASLARIDAHRRFHGALDAAGPGLADICWRVICAGEGIGGAE
KALGWPARSGKLVLGLALDRLVRFYGTG

Sequences:

>Translated_188_residues
MPFDNQIGFFFPTQSSNVKSSVRIKETDMIPRRLESRIHPDDRLDPGKTGPQLMRHVTVNAAESPIAWLASRGLLTPAQL
LAGERLRADYERAGLAARVTMRWDAAPPGKSRGGARAADASLARIDAHRRFHGALDAAGPGLADICWRVICAGEGIGGAE
KALGWPARSGKLVLGLALDRLVRFYGTG
>Mature_187_residues
PFDNQIGFFFPTQSSNVKSSVRIKETDMIPRRLESRIHPDDRLDPGKTGPQLMRHVTVNAAESPIAWLASRGLLTPAQLL
AGERLRADYERAGLAARVTMRWDAAPPGKSRGGARAADASLARIDAHRRFHGALDAAGPGLADICWRVICAGEGIGGAEK
ALGWPARSGKLVLGLALDRLVRFYGTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20263; Mature: 20132

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFDNQIGFFFPTQSSNVKSSVRIKETDMIPRRLESRIHPDDRLDPGKTGPQLMRHVTVN
CCCCCCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC
AAESPIAWLASRGLLTPAQLLAGERLRADYERAGLAARVTMRWDAAPPGKSRGGARAADA
CCCCHHHHHHHCCCCCHHHHHHCHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCCCHHHH
SLARIDAHRRFHGALDAAGPGLADICWRVICAGEGIGGAEKALGWPARSGKLVLGLALDR
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCEEEHHHHHH
LVRFYGTG
HHHHHCCC
>Mature Secondary Structure 
PFDNQIGFFFPTQSSNVKSSVRIKETDMIPRRLESRIHPDDRLDPGKTGPQLMRHVTVN
CCCCCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC
AAESPIAWLASRGLLTPAQLLAGERLRADYERAGLAARVTMRWDAAPPGKSRGGARAADA
CCCCHHHHHHHCCCCCHHHHHHCHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCCCHHHH
SLARIDAHRRFHGALDAAGPGLADICWRVICAGEGIGGAEKALGWPARSGKLVLGLALDR
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCEEEHHHHHH
LVRFYGTG
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA