| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487089
Identifier: 103487089
GI number: 103487089
Start: 1681104
End: 1681742
Strand: Reverse
Name: 103487089
Synonym: Sala_1604
Alternate gene names: NA
Gene position: 1681742-1681104 (Counterclockwise)
Preceding gene: 103487091
Following gene: 103487087
Centisome position: 50.27
GC content: 64.16
Gene sequence:
>639_bases ATGACCAATCCGCGGGCGCAGGCCCAACAAACCAAAGCCCCGCTGGTCCGCCGACTGCGCGAGGGGGTGAAACGCTTTTT CGGGCCGTGGGGCATGTTCGTGCGCGGGTTCATCAAGCATCCGGTCATGGTCGGGTCGATCGTGCCGTCGTCGCCGACGC TGATCCGCCACATGCTGAAACCCATCGACTGGAAAAACACCAGGCTGTTCGTCGAATATGGTCCCGGCGTCGGCACCTTC TGCCGCCCGGTGCTCGAACACCTGGCCGGCGACGCGACCCTGATCGCGATCGACACGAACGAGGATTTTGTCGATTATCT GCGGAGGGACATTCGCGACAGCCGTTTCATCGCGGTCCATGGTTCGGCCGCCGACGTCGAGGACATTGTTCGCGCGCACG GGTTCGACCATGCCGATTATGTGCTTTCCGGCCTGCCATTCTCGACCCTGCCTGCCGGCGTCGGTCCGGCGATTGCCGCG GCGACCCACCGCGTGCTGCGCCCCGGCGGCGCCTTCCTCGTCTATCAGTTCCGTGCCCGCGCGCGCGATTTCCTTGCCGC GCATTTCGCCCGCATCGACAATGCGTTCGAGTGGGTGAATGTGCCGCCCTGTTTCCTCTTCTGGGCCTGGAAGGATTAG
Upstream 100 bases:
>100_bases CACCGTCGTCGGGCTGTCCAGAGTCAAGACAGACTCTTTCCTTGCGCGACGCCCCTGATTTTGCCACGCATTTGATCGAC CCAACAACGCGAAAGCCATC
Downstream 100 bases:
>100_bases GGGCTAGACATCGGGATCGGGGTCACCGAGGCCGAAGTTGAGTTTGCGCGACACCGTATAATCGGCGACGCCGACGACGA ACCAGGCGAGTGTCCAGCGC
Product: methyltransferase type 12
Products: S-adenosyl-L-homocysteine; phosphatidyl-N-methylethanolamine
Alternate protein names: Ribosomal RNA Adenine Dimethylase; Phospholipid N-Methyltransferase; Methyltransferase; Ribosomal RNA Adenine Dimethylase Domain-Containing Protein; Ribosomal RNA Adenine Dimethylase Domain Protein; Phospholipid N-Methyltransferase-Like Protein; Ribosomal RNA Adenine Methylase Transferase-Like Protein; Ribosomal RNA Adenine Methylase Transferase; Generic Methyltransferase; Dimethyladenosine Transferase; Conserved Protein
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MTNPRAQAQQTKAPLVRRLREGVKRFFGPWGMFVRGFIKHPVMVGSIVPSSPTLIRHMLKPIDWKNTRLFVEYGPGVGTF CRPVLEHLAGDATLIAIDTNEDFVDYLRRDIRDSRFIAVHGSAADVEDIVRAHGFDHADYVLSGLPFSTLPAGVGPAIAA ATHRVLRPGGAFLVYQFRARARDFLAAHFARIDNAFEWVNVPPCFLFWAWKD
Sequences:
>Translated_212_residues MTNPRAQAQQTKAPLVRRLREGVKRFFGPWGMFVRGFIKHPVMVGSIVPSSPTLIRHMLKPIDWKNTRLFVEYGPGVGTF CRPVLEHLAGDATLIAIDTNEDFVDYLRRDIRDSRFIAVHGSAADVEDIVRAHGFDHADYVLSGLPFSTLPAGVGPAIAA ATHRVLRPGGAFLVYQFRARARDFLAAHFARIDNAFEWVNVPPCFLFWAWKD >Mature_211_residues TNPRAQAQQTKAPLVRRLREGVKRFFGPWGMFVRGFIKHPVMVGSIVPSSPTLIRHMLKPIDWKNTRLFVEYGPGVGTFC RPVLEHLAGDATLIAIDTNEDFVDYLRRDIRDSRFIAVHGSAADVEDIVRAHGFDHADYVLSGLPFSTLPAGVGPAIAAA THRVLRPGGAFLVYQFRARARDFLAAHFARIDNAFEWVNVPPCFLFWAWKD
Specific function: Unknown
COG id: COG3963
COG function: function code I; Phospholipid N-methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.17
Molecular weight: Translated: 23828; Mature: 23697
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPRAQAQQTKAPLVRRLREGVKRFFGPWGMFVRGFIKHPVMVGSIVPSSPTLIRHMLK CCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHC PIDWKNTRLFVEYGPGVGTFCRPVLEHLAGDATLIAIDTNEDFVDYLRRDIRDSRFIAVH CCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCEEEEEE GSAADVEDIVRAHGFDHADYVLSGLPFSTLPAGVGPAIAAATHRVLRPGGAFLVYQFRAR CCCCCHHHHHHHCCCCCHHHHHHCCCHHHCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHH ARDFLAAHFARIDNAFEWVNVPPCFLFWAWKD HHHHHHHHHHHHHCCHHCCCCCCEEEEEEECC >Mature Secondary Structure TNPRAQAQQTKAPLVRRLREGVKRFFGPWGMFVRGFIKHPVMVGSIVPSSPTLIRHMLK CCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHC PIDWKNTRLFVEYGPGVGTFCRPVLEHLAGDATLIAIDTNEDFVDYLRRDIRDSRFIAVH CCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCEEEEEE GSAADVEDIVRAHGFDHADYVLSGLPFSTLPAGVGPAIAAATHRVLRPGGAFLVYQFRAR CCCCCHHHHHHHCCCCCHHHHHHCCCHHHCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHH ARDFLAAHFARIDNAFEWVNVPPCFLFWAWKD HHHHHHHHHHHHHCCHHCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-adenosyl-L-methionine; phosphatidylethanolamine
Specific reaction: S-adenosyl-L-methionine + phosphatidylethanolamine = S-adenosyl-L-homocysteine + phosphatidyl-N-methylethanolamine
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA