Click here to switch to the map view.

The map label for this gene is hslV [H]

Identifier: 103487079

GI number: 103487079

Start: 1670334

End: 1670900

Strand: Direct

Name: hslV [H]

Synonym: Sala_1594

Alternate gene names: 103487079

Gene position: 1670334-1670900 (Clockwise)

Preceding gene: 103487078

Following gene: 103487080

Centisome position: 49.93

GC content: 65.78

Gene sequence:

>567_bases
ATGACCCATCCCCACGCGCAAAGTGCCGCGCCCTGGCACGGAACCACCATTCTTTCGGCCCGCAACGAAGGCAAGGTCGT
CGTCATCGGCGACGGGCAGGTGTCGATGGGCCAGACGGTGATGAAGCCCAACGCCCGCAAGGTCCGCCGCCTGCACGACG
GCAGCGTGATCGGCGGCTTCGCGGGCGCGACCGCCGACGCTTTCACGCTGTTCGAGCGGCTCGAGGCCAAGCTGGAGCGC
CACAACGGCCAGCTTCTCCGCGCCGCGGTCGAACTGGCGAAGGACTGGCGCACCGACAAATATCTGCGCAACCTGGAGGC
GATGATGATCGTCGCCGACAGGGAAGTCACGCTCGTCATCACCGGCAACGGCGACGTGCTCGAACCCACGGGCGGCATCG
TCGCGATCGGCTCGGGCGGCAATTTCGCGCTGTCGGCGGCCCGCGCGCTCGCCGATTACGAAAAAGACCCCGAGGTGCTG
GCGAAAAAGGCGATGGCCGTCGCCGCCGAGATCTGCGTCTATACCAACGACCAGTTCACGCTCGAAACCATCGAAATCCA
GGCGTAA

Upstream 100 bases:

>100_bases
AGGTCAAGGCGATCGTCGAAGCGCTCGCCAAGCGCTCGCCCGGCTGAAGGCGCTCGCCCGCCCCTTGCGGCGCCACCCGC
CATCGCCCATATCGCGCGGC

Downstream 100 bases:

>100_bases
TCCCATGAACAAAGATTTGACCCCGAAGGCGATCGTCGCCGCACTGGACACGCATATCATCGGCCAGGATGCGGCGAAGC
GCGCGGTCGCGGTGGCGCTG

Product: ATP-dependent protease peptidase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MTHPHAQSAAPWHGTTILSARNEGKVVVIGDGQVSMGQTVMKPNARKVRRLHDGSVIGGFAGATADAFTLFERLEAKLER
HNGQLLRAAVELAKDWRTDKYLRNLEAMMIVADREVTLVITGNGDVLEPTGGIVAIGSGGNFALSAARALADYEKDPEVL
AKKAMAVAAEICVYTNDQFTLETIEIQA

Sequences:

>Translated_188_residues
MTHPHAQSAAPWHGTTILSARNEGKVVVIGDGQVSMGQTVMKPNARKVRRLHDGSVIGGFAGATADAFTLFERLEAKLER
HNGQLLRAAVELAKDWRTDKYLRNLEAMMIVADREVTLVITGNGDVLEPTGGIVAIGSGGNFALSAARALADYEKDPEVL
AKKAMAVAAEICVYTNDQFTLETIEIQA
>Mature_187_residues
THPHAQSAAPWHGTTILSARNEGKVVVIGDGQVSMGQTVMKPNARKVRRLHDGSVIGGFAGATADAFTLFERLEAKLERH
NGQLLRAAVELAKDWRTDKYLRNLEAMMIVADREVTLVITGNGDVLEPTGGIVAIGSGGNFALSAARALADYEKDPEVLA
KKAMAVAAEICVYTNDQFTLETIEIQA

Specific function: Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery [H]

COG id: COG5405

COG function: function code O; ATP-dependent protease HslVU (ClpYQ), peptidase subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase T1B family. HslV subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790367, Length=175, Percent_Identity=56.5714285714286, Blast_Score=200, Evalue=4e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022281
- InterPro:   IPR001353 [H]

Pfam domain/function: PF00227 Proteasome [H]

EC number: 3.4.25.-

Molecular weight: Translated: 20200; Mature: 20069

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHPHAQSAAPWHGTTILSARNEGKVVVIGDGQVSMGQTVMKPNARKVRRLHDGSVIGGF
CCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCEEECCCHHHHHHHCCCCEEECC
AGATADAFTLFERLEAKLERHNGQLLRAAVELAKDWRTDKYLRNLEAMMIVADREVTLVI
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCEEEEEEECCEEEEEE
TGNGDVLEPTGGIVAIGSGGNFALSAARALADYEKDPEVLAKKAMAVAAEICVYTNDQFT
ECCCCEECCCCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEECCCEE
LETIEIQA
EEEEEEEC
>Mature Secondary Structure 
THPHAQSAAPWHGTTILSARNEGKVVVIGDGQVSMGQTVMKPNARKVRRLHDGSVIGGF
CCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCEEECCCHHHHHHHCCCCEEECC
AGATADAFTLFERLEAKLERHNGQLLRAAVELAKDWRTDKYLRNLEAMMIVADREVTLVI
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCEEEEEEECCEEEEEE
TGNGDVLEPTGGIVAIGSGGNFALSAARALADYEKDPEVLAKKAMAVAAEICVYTNDQFT
ECCCCEECCCCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEECCCEE
LETIEIQA
EEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA