The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487054

Identifier: 103487054

GI number: 103487054

Start: 1640935

End: 1642302

Strand: Direct

Name: 103487054

Synonym: Sala_1569

Alternate gene names: NA

Gene position: 1640935-1642302 (Clockwise)

Preceding gene: 103487053

Following gene: 103487055

Centisome position: 49.05

GC content: 61.99

Gene sequence:

>1368_bases
ATGACAATTGTTCCGATCATCACGACCCTTGCAGAATATCAGACACGATTCTGGGCGCTCGTCGGGGAGGATTTGCGCGC
GCGCGGCTTTGCGCCACATTTCGTGTCGTTCGACGACCGCTCGTGCGACATGCTGAACAGCCGGGGTTTCGCAGTCACCG
CCGCCAATGATGTCGCGCGGCCGCCGGCGAGTGAGCTCGAAGCGGTGCTTGACCGTGCGGGCGTGACGAACCTCGCCTAC
TGGACGTCGCACGAACGCTTCGCGTTCGTGCGGTCGGATGATGAGGCGATGAGGGCGAAACTCGCGCGCAGCATCGTCGC
GGCACAATCGGCCATTGCCGACGCGCAGCGAAACGGCCAGCCGGTCATGGTCCAGGAGGTCGGCGGCTTCCTGTCGGTCA
TCGGATCGTGGTTTGCGGCGCGTAGCGCCGGAATCCGCCACTTTTTCATCGAACCCAGCTTTTTTCGCGGTCGGCTGCTG
TTCCGAGAAGGCGATTTTGCCGCCCCCGTGATACCGGCGGACGCACGCGCCGATCATGGGGCTGACTTTTCGGCATATCT
GCAAAAAACGCTGGCCGACGGGCAGATCGTCATCCCGAAAAAGGATGCCCACCATTATAATGCAGCGTGGAAAAAGGTGC
TCAATCTCAGGAATGCGCGGCGCTTTGCCGAAAAGGCCTATGACAAGTATATTCTCGGCAAGCGGCAGGAGTTCGGCTTC
ATCGGGCAGCACGCCGCAACGCATGTGAAGGCGCTCGTGAACTCGCGTAAGCTTGCAGGCCATTATACGCCGCTCGATGA
TATCGATGATTTCCTGTATTTTCCGCTGCATGTGCCGGGCGATATTGCGCTGACGCTCCGGTCGCCCGAATATCTGGATC
AGCTGGCGCTCGTCGACTATATCTGCCGTCACCTTCCCGACGGAGTGCGGCTGGCGATCAAGGAGCATCCCGCGATGGTC
GGCATGATGCAGCCGGACCGGCTCAAGGCCATGCTCCGGCGCTACCCGCGCCTGGCGCTGATCGACCCCGGCACCAACAA
TTATGCGGTCATGCGGCGGGCGAAGGGGGTTGTGACGATCAATAGCAAGACGGGCGCGGAAGCGGGCCTCATCGGTTTGC
CCGTCATCGTGCTCGGCGATGCATTCTATCGCGAGGCCCCTTTCGCCCACGCCCTCGACAATCTGGTCGACCTGCCCGCG
GCGATGCAAAAGCTGGTTGATGGCGAAGCCAGCTGTTCTGCCGGCCCGGCCCGGCTCGACTGGTTCGCGGGTGCCTGGGA
ACTCAGCCGACCTGGCGAGCTTTATGTGACGGGCGCCGATGAGGTGCGGACCTTCACCGACACGCTGACGTCATATCTGC
GCGCCTGA

Upstream 100 bases:

>100_bases
AAAATATTTCATCGCGCGCGGCGCATCGTCGGTCCGCGCCTTTCCGGCGACCGGGAGAGCGCGTCCCGGTCGCCCTTCGC
CTTATTGAGTTTACGATCCC

Downstream 100 bases:

>100_bases
AAAGGCGCGATCCCATTGATTTCTTCCGGCTGACACAAGGCATCATGTCCGACAATCTCGTTTCAATCATCACCCCCGCC
TATAAGGCCGCCGACATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 455; Mature: 454

Protein sequence:

>455_residues
MTIVPIITTLAEYQTRFWALVGEDLRARGFAPHFVSFDDRSCDMLNSRGFAVTAANDVARPPASELEAVLDRAGVTNLAY
WTSHERFAFVRSDDEAMRAKLARSIVAAQSAIADAQRNGQPVMVQEVGGFLSVIGSWFAARSAGIRHFFIEPSFFRGRLL
FREGDFAAPVIPADARADHGADFSAYLQKTLADGQIVIPKKDAHHYNAAWKKVLNLRNARRFAEKAYDKYILGKRQEFGF
IGQHAATHVKALVNSRKLAGHYTPLDDIDDFLYFPLHVPGDIALTLRSPEYLDQLALVDYICRHLPDGVRLAIKEHPAMV
GMMQPDRLKAMLRRYPRLALIDPGTNNYAVMRRAKGVVTINSKTGAEAGLIGLPVIVLGDAFYREAPFAHALDNLVDLPA
AMQKLVDGEASCSAGPARLDWFAGAWELSRPGELYVTGADEVRTFTDTLTSYLRA

Sequences:

>Translated_455_residues
MTIVPIITTLAEYQTRFWALVGEDLRARGFAPHFVSFDDRSCDMLNSRGFAVTAANDVARPPASELEAVLDRAGVTNLAY
WTSHERFAFVRSDDEAMRAKLARSIVAAQSAIADAQRNGQPVMVQEVGGFLSVIGSWFAARSAGIRHFFIEPSFFRGRLL
FREGDFAAPVIPADARADHGADFSAYLQKTLADGQIVIPKKDAHHYNAAWKKVLNLRNARRFAEKAYDKYILGKRQEFGF
IGQHAATHVKALVNSRKLAGHYTPLDDIDDFLYFPLHVPGDIALTLRSPEYLDQLALVDYICRHLPDGVRLAIKEHPAMV
GMMQPDRLKAMLRRYPRLALIDPGTNNYAVMRRAKGVVTINSKTGAEAGLIGLPVIVLGDAFYREAPFAHALDNLVDLPA
AMQKLVDGEASCSAGPARLDWFAGAWELSRPGELYVTGADEVRTFTDTLTSYLRA
>Mature_454_residues
TIVPIITTLAEYQTRFWALVGEDLRARGFAPHFVSFDDRSCDMLNSRGFAVTAANDVARPPASELEAVLDRAGVTNLAYW
TSHERFAFVRSDDEAMRAKLARSIVAAQSAIADAQRNGQPVMVQEVGGFLSVIGSWFAARSAGIRHFFIEPSFFRGRLLF
REGDFAAPVIPADARADHGADFSAYLQKTLADGQIVIPKKDAHHYNAAWKKVLNLRNARRFAEKAYDKYILGKRQEFGFI
GQHAATHVKALVNSRKLAGHYTPLDDIDDFLYFPLHVPGDIALTLRSPEYLDQLALVDYICRHLPDGVRLAIKEHPAMVG
MMQPDRLKAMLRRYPRLALIDPGTNNYAVMRRAKGVVTINSKTGAEAGLIGLPVIVLGDAFYREAPFAHALDNLVDLPAA
MQKLVDGEASCSAGPARLDWFAGAWELSRPGELYVTGADEVRTFTDTLTSYLRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50368; Mature: 50237

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIVPIITTLAEYQTRFWALVGEDLRARGFAPHFVSFDDRSCDMLNSRGFAVTAANDVAR
CEEHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEECCCCCCCHHHCCCCEEEEECCCCCC
PPASELEAVLDRAGVTNLAYWTSHERFAFVRSDDEAMRAKLARSIVAAQSAIADAQRNGQ
CCHHHHHHHHHHCCCCCEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PVMVQEVGGFLSVIGSWFAARSAGIRHFFIEPSFFRGRLLFREGDFAAPVIPADARADHG
CEEHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHCCEEEEECCCCCCCCCCCCCCCCCC
ADFSAYLQKTLADGQIVIPKKDAHHYNAAWKKVLNLRNARRFAEKAYDKYILGKRQEFGF
CCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
IGQHAATHVKALVNSRKLAGHYTPLDDIDDFLYFPLHVPGDIALTLRSPEYLDQLALVDY
HHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHEEEEEECCCCEEEEECCHHHHHHHHHHHH
ICRHLPDGVRLAIKEHPAMVGMMQPDRLKAMLRRYPRLALIDPGTNNYAVMRRAKGVVTI
HHHHCCCCEEEEEECCCCEEECCCCHHHHHHHHHCCCEEEECCCCCCHHHEEECCCEEEE
NSKTGAEAGLIGLPVIVLGDAFYREAPFAHALDNLVDLPAAMQKLVDGEASCSAGPARLD
CCCCCCCCCHHHCHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
WFAGAWELSRPGELYVTGADEVRTFTDTLTSYLRA
HCCCCEECCCCCEEEEECHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TIVPIITTLAEYQTRFWALVGEDLRARGFAPHFVSFDDRSCDMLNSRGFAVTAANDVAR
EEHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEECCCCCCCHHHCCCCEEEEECCCCCC
PPASELEAVLDRAGVTNLAYWTSHERFAFVRSDDEAMRAKLARSIVAAQSAIADAQRNGQ
CCHHHHHHHHHHCCCCCEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PVMVQEVGGFLSVIGSWFAARSAGIRHFFIEPSFFRGRLLFREGDFAAPVIPADARADHG
CEEHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHCCEEEEECCCCCCCCCCCCCCCCCC
ADFSAYLQKTLADGQIVIPKKDAHHYNAAWKKVLNLRNARRFAEKAYDKYILGKRQEFGF
CCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
IGQHAATHVKALVNSRKLAGHYTPLDDIDDFLYFPLHVPGDIALTLRSPEYLDQLALVDY
HHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHEEEEEECCCCEEEEECCHHHHHHHHHHHH
ICRHLPDGVRLAIKEHPAMVGMMQPDRLKAMLRRYPRLALIDPGTNNYAVMRRAKGVVTI
HHHHCCCCEEEEEECCCCEEECCCCHHHHHHHHHCCCEEEECCCCCCHHHEEECCCEEEE
NSKTGAEAGLIGLPVIVLGDAFYREAPFAHALDNLVDLPAAMQKLVDGEASCSAGPARLD
CCCCCCCCCHHHCHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
WFAGAWELSRPGELYVTGADEVRTFTDTLTSYLRA
HCCCCEECCCCCEEEEECHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA