Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is tuaG [H]

Identifier: 103487055

GI number: 103487055

Start: 1642347

End: 1643105

Strand: Direct

Name: tuaG [H]

Synonym: Sala_1570

Alternate gene names: 103487055

Gene position: 1642347-1643105 (Clockwise)

Preceding gene: 103487054

Following gene: 103487075

Centisome position: 49.1

GC content: 60.08

Gene sequence:

>759_bases
ATGTCCGACAATCTCGTTTCAATCATCACCCCCGCCTATAAGGCCGCCGACATCATTGCGGAGACGATTTGTTCGGTCCA
GTCGCAAACCCATCGTGAGTGGGAAATGCTGATTGCCGAGGATTGCGGTCCTGACGAAACGCGCGCGATCGTTCGCGAGT
TCGCCCGCGCCGACCCCAGGGTCAGGCTGCTCCAAATGCCGGTCAATGGCGGGCCGGCAGCCGCGCGCAATCTGGCGCTG
TCCACGGCAAAGGGCCGGTGGCTTGCCTTTCTCGACAGCGACGACCTGTGGCTTCCCGAAAAGCTGGAGCGCCAACTGGC
CTTTCATCGCACCCGCGACGACGCCGTGATCAGCTTTACCGGTTTCCGGCGCATCAACGCCGAGGGAAGCGAGACAGGGC
GATACATCGGCGTGCCGCCTGTGATGGATTACAGGGCGCTGCTGGGAAACACGGCGATCGCCACCTCGACCGTCATCGTC
GACCGGCAACAGTCGGGCGAGTTCAGAATGCAGAAGACCTATTATGACGATTTCGCATGCTGGCTGGCGCTGCTGCGTAA
GGGAAAAGTTGCAATCGGGCTGGACGAGGACCTGATGCGCTATCGCGTCATGGCGCAATCGGTCAGCCGGAACAAGGGCA
ACAGCGCAAGGCAGGTCTGGCTTGCCTATCGCAATATCGAGAAACTGTCGCCCTTGGCCGCCGCATGGTATTTTGCCCAA
TATTCGGCACGCGCCTTCCTGAAATATCGCAGATTCTGA

Upstream 100 bases:

>100_bases
GCGCCGATGAGGTGCGGACCTTCACCGACACGCTGACGTCATATCTGCGCGCCTGAAAAGGCGCGATCCCATTGATTTCT
TCCGGCTGACACAAGGCATC

Downstream 100 bases:

>100_bases
CCAGTTATCCAAGATCAGGGAATCAGAAGTGCTCGTTCGATCACGTCTGCTGCGGGATCTGCTCTGAAAAAGGCCCGGCG
CGGTTCCGGAAAAACGCGCG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MSDNLVSIITPAYKAADIIAETICSVQSQTHREWEMLIAEDCGPDETRAIVREFARADPRVRLLQMPVNGGPAAARNLAL
STAKGRWLAFLDSDDLWLPEKLERQLAFHRTRDDAVISFTGFRRINAEGSETGRYIGVPPVMDYRALLGNTAIATSTVIV
DRQQSGEFRMQKTYYDDFACWLALLRKGKVAIGLDEDLMRYRVMAQSVSRNKGNSARQVWLAYRNIEKLSPLAAAWYFAQ
YSARAFLKYRRF

Sequences:

>Translated_252_residues
MSDNLVSIITPAYKAADIIAETICSVQSQTHREWEMLIAEDCGPDETRAIVREFARADPRVRLLQMPVNGGPAAARNLAL
STAKGRWLAFLDSDDLWLPEKLERQLAFHRTRDDAVISFTGFRRINAEGSETGRYIGVPPVMDYRALLGNTAIATSTVIV
DRQQSGEFRMQKTYYDDFACWLALLRKGKVAIGLDEDLMRYRVMAQSVSRNKGNSARQVWLAYRNIEKLSPLAAAWYFAQ
YSARAFLKYRRF
>Mature_251_residues
SDNLVSIITPAYKAADIIAETICSVQSQTHREWEMLIAEDCGPDETRAIVREFARADPRVRLLQMPVNGGPAAARNLALS
TAKGRWLAFLDSDDLWLPEKLERQLAFHRTRDDAVISFTGFRRINAEGSETGRYIGVPPVMDYRALLGNTAIATSTVIVD
RQQSGEFRMQKTYYDDFACWLALLRKGKVAIGLDEDLMRYRVMAQSVSRNKGNSARQVWLAYRNIEKLSPLAAAWYFAQY
SARAFLKYRRF

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788372, Length=108, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1790044, Length=102, Percent_Identity=35.2941176470588, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 28654; Mature: 28523

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNLVSIITPAYKAADIIAETICSVQSQTHREWEMLIAEDCGPDETRAIVREFARADPR
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCC
VRLLQMPVNGGPAAARNLALSTAKGRWLAFLDSDDLWLPEKLERQLAFHRTRDDAVISFT
EEEEEECCCCCCHHHHHHEEEECCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEE
GFRRINAEGSETGRYIGVPPVMDYRALLGNTAIATSTVIVDRQQSGEFRMQKTYYDDFAC
CEEEECCCCCCCCCEECCCCHHHHHHHHCCCHHHEEEEEEECCCCCCEEEHHHHHHHHHH
WLALLRKGKVAIGLDEDLMRYRVMAQSVSRNKGNSARQVWLAYRNIEKLSPLAAAWYFAQ
HHHHHHCCCEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YSARAFLKYRRF
HHHHHHHHHCCC
>Mature Secondary Structure 
SDNLVSIITPAYKAADIIAETICSVQSQTHREWEMLIAEDCGPDETRAIVREFARADPR
CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCC
VRLLQMPVNGGPAAARNLALSTAKGRWLAFLDSDDLWLPEKLERQLAFHRTRDDAVISFT
EEEEEECCCCCCHHHHHHEEEECCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEE
GFRRINAEGSETGRYIGVPPVMDYRALLGNTAIATSTVIVDRQQSGEFRMQKTYYDDFAC
CEEEECCCCCCCCCEECCCCHHHHHHHHCCCHHHEEEEEEECCCCCCEEEHHHHHHHHHH
WLALLRKGKVAIGLDEDLMRYRVMAQSVSRNKGNSARQVWLAYRNIEKLSPLAAAWYFAQ
HHHHHHCCCEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YSARAFLKYRRF
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10048024; 9384377 [H]