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The map label for this gene is yfbG [C]

Identifier: 103487051

GI number: 103487051

Start: 1636960

End: 1637919

Strand: Reverse

Name: yfbG [C]

Synonym: Sala_1566

Alternate gene names: 103487051

Gene position: 1637919-1636960 (Counterclockwise)

Preceding gene: 103487056

Following gene: 103487050

Centisome position: 48.96

GC content: 56.88

Gene sequence:

>960_bases
GTGCAGAAAACGAAATTTGGACGTCGGCGCGTCCTGGTTACAGGCGGGGCCGGTTTTCTGGGCTCGCACCTTGTGGACCG
CTTGCTGGCCCGCGGCGACGAAGTTCTTTGCGTCGATAATCTGTTCACAGGCGATAAGAGCAACCTCGACCATCTGGCGG
GAAATCCCCTGTTCGAATTCATGCGGCACGACGTTTGCTTTCCGCTGTTTGTCGAGGTTGACGCGATCTTCAATCTCGCA
TGTCCGGCATCGCCAATTCACTATCAGCACGATCCCGTGCAAACGACCAAAACGAGCGTCCACGGCGCGATCAACATGCT
GGGCCTTGCCAAGCGGCTGAAGGTGCCGATCTTTCAGGCATCGACGAGCGAAGTCTATGGTGACCCGACGATGCACCCGC
AGCAGGAAAGCTATTGGGGAAATGTCAATCCCATTGGTATTCGCAGTTGCTATGATGAAGGCAAGCGTTGCGCGGAAACG
CTGTTCTTCGATTATCATCGGCAGCACCAGCTGGACATAAAGATTGCCCGCATCTTCAATACCTATGGACCCCGGATGCA
CGCGGCCGACGGCCGCGTCGTTTCCAATTTCATCGTTCAGGCGCTGCACGGCGAAGACATCACGATTTACGGCGACGGCT
CACAGACCCGGTCATTCTGTTACGTTGACGATCTGATCTCGGCTTTCGTTGCGTTTATGGACGCCGGGCCGAACGTCCAC
GGACCTATAAATATCGGTAATCCTGCCGAGTTCACGATTCTCGAACTTGCGGAGAAGATATTGTCCAAGGTCGGCGGCGC
GTCGAAGCTCGTGCGTCAACCTCTGCCCCAGGACGACCCGTTGCAGCGGCAGCCCGACATCAGCCGGGCGAAGGCGCAAC
TGGGGTGGGAGCCGACGGTCGAACTTGATGAAGGTCTTGACCGCACGATCGCCTATTTCCGTCGCAAGCTGGAAATCTAG

Upstream 100 bases:

>100_bases
GTTGACGAATCGTCGTGCCGTAGCAGCCAGTTACCATCCTCCCGCTGGACAGCTTTCGGGCCATGCCATAGAGAGCCGCC
TTTCTCTTCGGGAGCTTGCT

Downstream 100 bases:

>100_bases
TCGGCAACCGGTGGTTACGGGCCGGGCACCCATGCTTTTCGCGGTCATCTGTCACTGGTAGGATACCCGCGGATTCATCC
CTGGCTGCCATCATCACGGG

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MQKTKFGRRRVLVTGGAGFLGSHLVDRLLARGDEVLCVDNLFTGDKSNLDHLAGNPLFEFMRHDVCFPLFVEVDAIFNLA
CPASPIHYQHDPVQTTKTSVHGAINMLGLAKRLKVPIFQASTSEVYGDPTMHPQQESYWGNVNPIGIRSCYDEGKRCAET
LFFDYHRQHQLDIKIARIFNTYGPRMHAADGRVVSNFIVQALHGEDITIYGDGSQTRSFCYVDDLISAFVAFMDAGPNVH
GPINIGNPAEFTILELAEKILSKVGGASKLVRQPLPQDDPLQRQPDISRAKAQLGWEPTVELDEGLDRTIAYFRRKLEI

Sequences:

>Translated_319_residues
MQKTKFGRRRVLVTGGAGFLGSHLVDRLLARGDEVLCVDNLFTGDKSNLDHLAGNPLFEFMRHDVCFPLFVEVDAIFNLA
CPASPIHYQHDPVQTTKTSVHGAINMLGLAKRLKVPIFQASTSEVYGDPTMHPQQESYWGNVNPIGIRSCYDEGKRCAET
LFFDYHRQHQLDIKIARIFNTYGPRMHAADGRVVSNFIVQALHGEDITIYGDGSQTRSFCYVDDLISAFVAFMDAGPNVH
GPINIGNPAEFTILELAEKILSKVGGASKLVRQPLPQDDPLQRQPDISRAKAQLGWEPTVELDEGLDRTIAYFRRKLEI
>Mature_319_residues
MQKTKFGRRRVLVTGGAGFLGSHLVDRLLARGDEVLCVDNLFTGDKSNLDHLAGNPLFEFMRHDVCFPLFVEVDAIFNLA
CPASPIHYQHDPVQTTKTSVHGAINMLGLAKRLKVPIFQASTSEVYGDPTMHPQQESYWGNVNPIGIRSCYDEGKRCAET
LFFDYHRQHQLDIKIARIFNTYGPRMHAADGRVVSNFIVQALHGEDITIYGDGSQTRSFCYVDDLISAFVAFMDAGPNVH
GPINIGNPAEFTILELAEKILSKVGGASKLVRQPLPQDDPLQRQPDISRAKAQLGWEPTVELDEGLDRTIAYFRRKLEI

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI42516563, Length=311, Percent_Identity=57.2347266881029, Blast_Score=389, Evalue=1e-108,
Organism=Homo sapiens, GI7657641, Length=329, Percent_Identity=27.9635258358663, Blast_Score=113, Evalue=2e-25,
Organism=Escherichia coli, GI1788589, Length=348, Percent_Identity=27.5862068965517, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI48994969, Length=336, Percent_Identity=27.3809523809524, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1788353, Length=337, Percent_Identity=24.9258160237389, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788365, Length=328, Percent_Identity=26.8292682926829, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1786974, Length=344, Percent_Identity=26.1627906976744, Blast_Score=77, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17539532, Length=312, Percent_Identity=56.7307692307692, Blast_Score=374, Evalue=1e-104,
Organism=Caenorhabditis elegans, GI115532424, Length=332, Percent_Identity=26.8072289156627, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17568069, Length=341, Percent_Identity=26.9794721407625, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21356223, Length=311, Percent_Identity=57.556270096463, Blast_Score=389, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 35640; Mature: 35640

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKTKFGRRRVLVTGGAGFLGSHLVDRLLARGDEVLCVDNLFTGDKSNLDHLAGNPLFEF
CCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHCCCHHHHH
MRHDVCFPLFVEVDAIFNLACPASPIHYQHDPVQTTKTSVHGAINMLGLAKRLKVPIFQA
HHHCCCCHHEEEHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEC
STSEVYGDPTMHPQQESYWGNVNPIGIRSCYDEGKRCAETLFFDYHRQHQLDIKIARIFN
CCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
TYGPRMHAADGRVVSNFIVQALHGEDITIYGDGSQTRSFCYVDDLISAFVAFMDAGPNVH
HCCCEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHCCCCCC
GPINIGNPAEFTILELAEKILSKVGGASKLVRQPLPQDDPLQRQPDISRAKAQLGWEPTV
CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCC
ELDEGLDRTIAYFRRKLEI
CHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MQKTKFGRRRVLVTGGAGFLGSHLVDRLLARGDEVLCVDNLFTGDKSNLDHLAGNPLFEF
CCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHCCCHHHHH
MRHDVCFPLFVEVDAIFNLACPASPIHYQHDPVQTTKTSVHGAINMLGLAKRLKVPIFQA
HHHCCCCHHEEEHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEC
STSEVYGDPTMHPQQESYWGNVNPIGIRSCYDEGKRCAETLFFDYHRQHQLDIKIARIFN
CCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
TYGPRMHAADGRVVSNFIVQALHGEDITIYGDGSQTRSFCYVDDLISAFVAFMDAGPNVH
HCCCEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHCCCCCC
GPINIGNPAEFTILELAEKILSKVGGASKLVRQPLPQDDPLQRQPDISRAKAQLGWEPTV
CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCC
ELDEGLDRTIAYFRRKLEI
CHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]