Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487042

Identifier: 103487042

GI number: 103487042

Start: 1622201

End: 1623061

Strand: Reverse

Name: 103487042

Synonym: Sala_1557

Alternate gene names: NA

Gene position: 1623061-1622201 (Counterclockwise)

Preceding gene: 103487043

Following gene: 103487041

Centisome position: 48.52

GC content: 65.62

Gene sequence:

>861_bases
TTGACTCCCGCCTCGCTCCAGACGCTGCCGCCGCGCGCCGGTATCGGGCTCAAGGCCCGGCATTATGCCGATGTGCTGGC
CGCGGCGGAGCGGGGCGCGGCGCCCGCCTGGGCCGAAGTCCACCCCCAAAACTACTTCGGCGCGGGCGGGCCGCCGCATC
GCTGGCTTACCGCGATCGCGGATATTGTTCCGATCAGCTTCCATTCGGTCGGCCTGTCGTTGGGCTCGGCAGCAGGCGTC
GACCGCGACGAACTCGACGCGCTTGCGCGTCTTTGCGACCGTTACCGGCCCGCGATGGTGTCCGACCATCTGAGCTGGAG
CAACACCGAGCGCGACAAGTTTCCCGACCTGCTTCCCATTCCCTACACCGATGCCGCGCTCGATCATTTCGTCCGCGAGG
TCGGCCGCGTGCAGGACCGGCTCGGCCGCCCGATCCTCATCGAAAATCCCTCGCGCTATCTGGCCTATGTGGGCGACGGC
TGGGACGAGGTTTCCTTTCTCCATGAACTTTGCTGCCGCAGCGGCTGCGGCCTGTTGCTCGATATCAACAATGTCGAGGT
GTCGGCTTTCAACCTGGACTTCGATCCGCTGTCATGGCTCGACACGATCGACCCCGCGTTCGTCGGCGAAATCCACGTCG
CGGGTCATGCGGTGAAGGACGACGGCGTCGGCGGCCGGATCGCCATCGACGATCATGGTTCCTCGGTGCGCGATAGCTGC
TGGACGCTGCTCGACCGCTTCCTTCGCCGCGCAGGGCCGTGCCCCGTTCTTGTCGAATGGGACAGCGATGTGCCCGAATA
CACCGTGTTGATGGCCGAGGCAGCAAGGGCCGATGCCTTGCTGGAGCCCGTTGATGCCTGA

Upstream 100 bases:

>100_bases
GCCTGGAAATATGTCGCCAAGGGCACATGCGAAAAGATGGGCGGAACGCTGACCGCGCACAAGGGCAACGCCAAGCCGGT
GCCGAAGAAGGGCTGATGCT

Downstream 100 bases:

>100_bases
CGGCGATCAGGCAGCGGTGGCGGCGACATTGCTTCACGGCCCGCGGCACCTGCCGCCCGGCCTGTTCGCGGGGACCGAGG
CGACGGTGCTGCGCGGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MTPASLQTLPPRAGIGLKARHYADVLAAAERGAAPAWAEVHPQNYFGAGGPPHRWLTAIADIVPISFHSVGLSLGSAAGV
DRDELDALARLCDRYRPAMVSDHLSWSNTERDKFPDLLPIPYTDAALDHFVREVGRVQDRLGRPILIENPSRYLAYVGDG
WDEVSFLHELCCRSGCGLLLDINNVEVSAFNLDFDPLSWLDTIDPAFVGEIHVAGHAVKDDGVGGRIAIDDHGSSVRDSC
WTLLDRFLRRAGPCPVLVEWDSDVPEYTVLMAEAARADALLEPVDA

Sequences:

>Translated_286_residues
MTPASLQTLPPRAGIGLKARHYADVLAAAERGAAPAWAEVHPQNYFGAGGPPHRWLTAIADIVPISFHSVGLSLGSAAGV
DRDELDALARLCDRYRPAMVSDHLSWSNTERDKFPDLLPIPYTDAALDHFVREVGRVQDRLGRPILIENPSRYLAYVGDG
WDEVSFLHELCCRSGCGLLLDINNVEVSAFNLDFDPLSWLDTIDPAFVGEIHVAGHAVKDDGVGGRIAIDDHGSSVRDSC
WTLLDRFLRRAGPCPVLVEWDSDVPEYTVLMAEAARADALLEPVDA
>Mature_285_residues
TPASLQTLPPRAGIGLKARHYADVLAAAERGAAPAWAEVHPQNYFGAGGPPHRWLTAIADIVPISFHSVGLSLGSAAGVD
RDELDALARLCDRYRPAMVSDHLSWSNTERDKFPDLLPIPYTDAALDHFVREVGRVQDRLGRPILIENPSRYLAYVGDGW
DEVSFLHELCCRSGCGLLLDINNVEVSAFNLDFDPLSWLDTIDPAFVGEIHVAGHAVKDDGVGGRIAIDDHGSSVRDSCW
TLLDRFLRRAGPCPVLVEWDSDVPEYTVLMAEAARADALLEPVDA

Specific function: Unknown

COG id: COG3220

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0276 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007801
- InterPro:   IPR013022 [H]

Pfam domain/function: PF05114 DUF692 [H]

EC number: NA

Molecular weight: Translated: 31213; Mature: 31082

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPASLQTLPPRAGIGLKARHYADVLAAAERGAAPAWAEVHPQNYFGAGGPPHRWLTAIA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHHHHH
DIVPISFHSVGLSLGSAAGVDRDELDALARLCDRYRPAMVSDHLSWSNTERDKFPDLLPI
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHCCCCCCCC
PYTDAALDHFVREVGRVQDRLGRPILIENPSRYLAYVGDGWDEVSFLHELCCRSGCGLLL
CCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCEEE
DINNVEVSAFNLDFDPLSWLDTIDPAFVGEIHVAGHAVKDDGVGGRIAIDDHGSSVRDSC
EECCEEEEEEECCCCCHHHHHHCCHHHHCEEEECCEEECCCCCCCEEEECCCCCHHHHHH
WTLLDRFLRRAGPCPVLVEWDSDVPEYTVLMAEAARADALLEPVDA
HHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TPASLQTLPPRAGIGLKARHYADVLAAAERGAAPAWAEVHPQNYFGAGGPPHRWLTAIA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHHHHH
DIVPISFHSVGLSLGSAAGVDRDELDALARLCDRYRPAMVSDHLSWSNTERDKFPDLLPI
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHCCCCCCCC
PYTDAALDHFVREVGRVQDRLGRPILIENPSRYLAYVGDGWDEVSFLHELCCRSGCGLLL
CCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCEEE
DINNVEVSAFNLDFDPLSWLDTIDPAFVGEIHVAGHAVKDDGVGGRIAIDDHGSSVRDSC
EECCEEEEEEECCCCCHHHHHHCCHHHHCEEEECCEEECCCCCCCEEEECCCCCHHHHHH
WTLLDRFLRRAGPCPVLVEWDSDVPEYTVLMAEAARADALLEPVDA
HHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA