Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487043

Identifier: 103487043

GI number: 103487043

Start: 1623066

End: 1623371

Strand: Reverse

Name: 103487043

Synonym: Sala_1558

Alternate gene names: NA

Gene position: 1623371-1623066 (Counterclockwise)

Preceding gene: 103487045

Following gene: 103487042

Centisome position: 48.53

GC content: 65.03

Gene sequence:

>306_bases
ATGACCAATTCGCTGAAACTGTCGCTCGCCGCCTCGGCGGTGCTCGCGCTCGCCGCGGGCAACGCCTTCACCGGCACCGC
CATCGCTGCCGAAGGCGCCAAGGGCGCCAAGGAAAAATGCTATGGCGTCGCGCTCAAGGGCAAGAATGACTGCGCCGCCG
GTCCGGGCACGAGTTGCGCCGGCACGTCGACCGTCGATTATCAGGGCAACGCCTGGAAATATGTCGCCAAGGGCACATGC
GAAAAGATGGGCGGAACGCTGACCGCGCACAAGGGCAACGCCAAGCCGGTGCCGAAGAAGGGCTGA

Upstream 100 bases:

>100_bases
TGCCAATTCCCGTTCCCGTCTTGCGTAACCTTTCGCCGTCTGGCGGCGAACCGGGAATGATGCCATCCTCCGCATCGAAC
TATTCACAAGGGAGATTCAC

Downstream 100 bases:

>100_bases
TGCTTTGACTCCCGCCTCGCTCCAGACGCTGCCGCCGCGCGCCGGTATCGGGCTCAAGGCCCGGCATTATGCCGATGTGC
TGGCCGCGGCGGAGCGGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MTNSLKLSLAASAVLALAAGNAFTGTAIAAEGAKGAKEKCYGVALKGKNDCAAGPGTSCAGTSTVDYQGNAWKYVAKGTC
EKMGGTLTAHKGNAKPVPKKG

Sequences:

>Translated_101_residues
MTNSLKLSLAASAVLALAAGNAFTGTAIAAEGAKGAKEKCYGVALKGKNDCAAGPGTSCAGTSTVDYQGNAWKYVAKGTC
EKMGGTLTAHKGNAKPVPKKG
>Mature_100_residues
TNSLKLSLAASAVLALAAGNAFTGTAIAAEGAKGAKEKCYGVALKGKNDCAAGPGTSCAGTSTVDYQGNAWKYVAKGTCE
KMGGTLTAHKGNAKPVPKKG

Specific function: Unknown

COG id: COG5572

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9950; Mature: 9819

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNSLKLSLAASAVLALAAGNAFTGTAIAAEGAKGAKEKCYGVALKGKNDCAAGPGTSCA
CCCCEEEHHHHHEEHHHHCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCC
GTSTVDYQGNAWKYVAKGTCEKMGGTLTAHKGNAKPVPKKG
CCCEEECCCCEEEEEECCCHHHCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure 
TNSLKLSLAASAVLALAAGNAFTGTAIAAEGAKGAKEKCYGVALKGKNDCAAGPGTSCA
CCCEEEHHHHHEEHHHHCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCC
GTSTVDYQGNAWKYVAKGTCEKMGGTLTAHKGNAKPVPKKG
CCCEEECCCCEEEEEECCCHHHCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA