| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is hisI
Identifier: 103487025
GI number: 103487025
Start: 1607054
End: 1607434
Strand: Reverse
Name: hisI
Synonym: Sala_1540
Alternate gene names: 103487025
Gene position: 1607434-1607054 (Counterclockwise)
Preceding gene: 103487029
Following gene: 103487024
Centisome position: 48.05
GC content: 68.24
Gene sequence:
>381_bases ATGGATGAGCAGCGCGATACGACCGACCGATTTCTCCCGCGTTTCGATGCCGCCGGGCTGGTGACGGCGATCGTCGTCGA CGCCGACACGCAGGCGCTGTTGATGGTCGCACATATGAATGCGGATGCGATCGAGGCGACGCGCGCGACGGGGCAGGCGC ATTTCTGGTCGCGTTCGCGCTCTGCGCTGTGGCGCAAGGGCGAGACGTCGGGCAACGGGCTGACGCTGGTCGAGATGCGC GTCGATTGCGATCAGGACGCGCTGCTGCTGCGCGTGAAGCCCGCGGGGCCCGCCTGTCACACCGGGCGCCGGTCGTGCTT CTATCGCCGCGTCGAGGCCGACGGCGGCCTGACCTTCCTTGCGGACGATGCGCAGGGTTAG
Upstream 100 bases:
>100_bases GAGGGCAAAGGCGATTGTCGCCCCCCTAATCACGATATTGTCACATCGGCGGTCACGCGCGGGGTGACAGCGGCTTCGAT CCTGCTCTAAAGCGGCGGGC
Downstream 100 bases:
>100_bases CGTTGCCCTCGCGCTGGCGGCGCTGCTGCTCGCGGCGTGCGAGCGCGGGGCGAACGGCGAGGAGGCGATCGACGCCGGAA ATCCGCTGGAGATTGCGGCG
Product: phosphoribosyl-AMP cyclohydrolase
Products: NA
Alternate protein names: PRA-CH
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MDEQRDTTDRFLPRFDAAGLVTAIVVDADTQALLMVAHMNADAIEATRATGQAHFWSRSRSALWRKGETSGNGLTLVEMR VDCDQDALLLRVKPAGPACHTGRRSCFYRRVEADGGLTFLADDAQG
Sequences:
>Translated_126_residues MDEQRDTTDRFLPRFDAAGLVTAIVVDADTQALLMVAHMNADAIEATRATGQAHFWSRSRSALWRKGETSGNGLTLVEMR VDCDQDALLLRVKPAGPACHTGRRSCFYRRVEADGGLTFLADDAQG >Mature_126_residues MDEQRDTTDRFLPRFDAAGLVTAIVVDADTQALLMVAHMNADAIEATRATGQAHFWSRSRSALWRKGETSGNGLTLVEMR VDCDQDALLLRVKPAGPACHTGRRSCFYRRVEADGGLTFLADDAQG
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0139
COG function: function code E; Phosphoribosyl-AMP cyclohydrolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PRA-CH family
Homologues:
Organism=Escherichia coli, GI2367128, Length=89, Percent_Identity=46.0674157303371, Blast_Score=93, Evalue=6e-21, Organism=Saccharomyces cerevisiae, GI6319819, Length=90, Percent_Identity=40, Blast_Score=64, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS3_SPHAL (Q1GSW9)
Other databases:
- EMBL: CP000356 - RefSeq: YP_616586.1 - ProteinModelPortal: Q1GSW9 - SMR: Q1GSW9 - GeneID: 4082439 - GenomeReviews: CP000356_GR - KEGG: sal:Sala_1540 - NMPDR: fig|317655.9.peg.1472 - HOGENOM: HBG294308 - OMA: LWLKGES - BioCyc: SALA317655:SALA_1540-MONOMER - BRENDA: 3.5.4.19 - GO: GO:0005737 - HAMAP: MF_01021 - InterPro: IPR002496 - ProDom: PD002610
Pfam domain/function: PF01502 PRA-CH
EC number: =3.5.4.19
Molecular weight: Translated: 13798; Mature: 13798
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEQRDTTDRFLPRFDAAGLVTAIVVDADTQALLMVAHMNADAIEATRATGQAHFWSRSR CCCCCCCHHHHCCCCCCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHCCCCCCHHCCCC SALWRKGETSGNGLTLVEMRVDCDQDALLLRVKPAGPACHTGRRSCFYRRVEADGGLTFL HHHCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEE ADDAQG ECCCCC >Mature Secondary Structure MDEQRDTTDRFLPRFDAAGLVTAIVVDADTQALLMVAHMNADAIEATRATGQAHFWSRSR CCCCCCCHHHHCCCCCCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHCCCCCCHHCCCC SALWRKGETSGNGLTLVEMRVDCDQDALLLRVKPAGPACHTGRRSCFYRRVEADGGLTFL HHHCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEE ADDAQG ECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA