The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is yhjE [H]

Identifier: 103486994

GI number: 103486994

Start: 1572460

End: 1573788

Strand: Direct

Name: yhjE [H]

Synonym: Sala_1509

Alternate gene names: 103486994

Gene position: 1572460-1573788 (Clockwise)

Preceding gene: 103486986

Following gene: 103486995

Centisome position: 47.01

GC content: 65.99

Gene sequence:

>1329_bases
ATGGCTGCCGACACCGTCCCGACGACCGAGGCCGAACGCGACGCTCGCGCCCTCCACGACCATGACGGCCACCGCATCGA
CCCCGCCGAAATCGCCATCGGCGTCATCATCGGCCGGACCTCAGAGTTTTTCGACTTCTTCGTCTATGCGATCGCTTCGG
TGCTGGTATTTCCCAAGCTCGTCTTTCCGCACCTCGATCCGCTGGCGGGCACACTCTGGTCCTTCGCGATCTTTGCCCTC
GCCTTTGTCGCGCGCCCGGTCGGAACGGTCATCTTCACCGCGATCGACCGCGGTTATGGCCGTGGCGCCAAGCTCACCAT
TGCGCTGTTCCTGCTTGGCGGATCGACCGCGGCGATCGCCTTCCTGCCCGGCTATGAATCGATCGGCATCGGCGCCGCGC
TGCTGCTCGCGCTGTTCCGCATGGGCCAGGGCGTCGCGCTCGGCGGCTCATGGGACGGCCTCGCCTCGCTGCTCGCATTG
AACGCCCCCGAATCGAAACGCGGCTGGTATGCGATGATCCCGCAGCTCGGCGCGCCGCTTGGCCTCATCGTCGCCAGCCT
GCTCTTCATGTTCCTGATCTCCGCGCTCCCGGCCGAAGACTTTCTCGCCTGGGGTTGGCGCTATCCTTTCTTCGTCGCCT
TTGCGATCAACGTCGTCGCGCTGTTCGCGCGGCTGCGCATCGTCGTGACCCCCGACTATGCCGAGCTGTTCGAAAACCGC
GCGCTTCAGCCCGCGCCGCTCCTCGAAACGGTACGGTCGGAATGGAAAACCATCGTCACCGGCGCCTTCGCCCCGCTCGC
CAGCTTCGCGATGTTCCACATGGTCACTGTCTATCCGCTGTCGTGGGTGTTCCTGTTCACCGACGAAACCCCCGCACGCT
TCCTGATGATCGAGGCGATCGCTGCGGTCGGCGGCGTGATCGCGATCATCGCCTCGGGCTATCTTGCCGACCGCTTCGGG
CGCCGCACCGTGCTTGCCGCGACGGCGGCGGCGATCGCGGCGTTCAGCGGCTTTGCCCCGCAATTGCTCGACGCGGGCCA
GGCGGGTGAGGCGAGCTTCATGATCCTCGGCTTCCTCCTGCTCGGCCTGTCGTTCGGGCAATCGTCGGGCGCGCTCTCAT
CGAACTTCACGCCGCGCCACCGCTACACCGGGTCGGCCTTCACCGCCGACCTCGCCTGGCTGTTCGGTGCTGGTTTCGCA
CCGATGGTGGCGCTCTGGCTGTCGAGCGAATTCGGGCTGATCGCCGCGGGTGCCTATCTGCTGTCGGGCGCGATCGTTAC
GCTCGTCGCGCTGTGGCTCAACCGCGAACTTGCACGCACGATCGATTGA

Upstream 100 bases:

>100_bases
ATCGCGCAGGGGCGTTTTCATTGGGGGCGCTTTTGCCCTATGACCGACTCGTGCCCGCGCGTCCCCACGTGGCGCGGGCG
CCAGCTCAAGGATCGATACC

Downstream 100 bases:

>100_bases
GCCTGAGCCCCGCGGAGCAGCTTCAAAAGCGAGACGGGGGACGGCTCTCTGACGCATGGCAGGCACCGCTGATCTGCCCG
GTCCGGGATCGGGTGGCAGG

Product: general substrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MAADTVPTTEAERDARALHDHDGHRIDPAEIAIGVIIGRTSEFFDFFVYAIASVLVFPKLVFPHLDPLAGTLWSFAIFAL
AFVARPVGTVIFTAIDRGYGRGAKLTIALFLLGGSTAAIAFLPGYESIGIGAALLLALFRMGQGVALGGSWDGLASLLAL
NAPESKRGWYAMIPQLGAPLGLIVASLLFMFLISALPAEDFLAWGWRYPFFVAFAINVVALFARLRIVVTPDYAELFENR
ALQPAPLLETVRSEWKTIVTGAFAPLASFAMFHMVTVYPLSWVFLFTDETPARFLMIEAIAAVGGVIAIIASGYLADRFG
RRTVLAATAAAIAAFSGFAPQLLDAGQAGEASFMILGFLLLGLSFGQSSGALSSNFTPRHRYTGSAFTADLAWLFGAGFA
PMVALWLSSEFGLIAAGAYLLSGAIVTLVALWLNRELARTID

Sequences:

>Translated_442_residues
MAADTVPTTEAERDARALHDHDGHRIDPAEIAIGVIIGRTSEFFDFFVYAIASVLVFPKLVFPHLDPLAGTLWSFAIFAL
AFVARPVGTVIFTAIDRGYGRGAKLTIALFLLGGSTAAIAFLPGYESIGIGAALLLALFRMGQGVALGGSWDGLASLLAL
NAPESKRGWYAMIPQLGAPLGLIVASLLFMFLISALPAEDFLAWGWRYPFFVAFAINVVALFARLRIVVTPDYAELFENR
ALQPAPLLETVRSEWKTIVTGAFAPLASFAMFHMVTVYPLSWVFLFTDETPARFLMIEAIAAVGGVIAIIASGYLADRFG
RRTVLAATAAAIAAFSGFAPQLLDAGQAGEASFMILGFLLLGLSFGQSSGALSSNFTPRHRYTGSAFTADLAWLFGAGFA
PMVALWLSSEFGLIAAGAYLLSGAIVTLVALWLNRELARTID
>Mature_441_residues
AADTVPTTEAERDARALHDHDGHRIDPAEIAIGVIIGRTSEFFDFFVYAIASVLVFPKLVFPHLDPLAGTLWSFAIFALA
FVARPVGTVIFTAIDRGYGRGAKLTIALFLLGGSTAAIAFLPGYESIGIGAALLLALFRMGQGVALGGSWDGLASLLALN
APESKRGWYAMIPQLGAPLGLIVASLLFMFLISALPAEDFLAWGWRYPFFVAFAINVVALFARLRIVVTPDYAELFENRA
LQPAPLLETVRSEWKTIVTGAFAPLASFAMFHMVTVYPLSWVFLFTDETPARFLMIEAIAAVGGVIAIIASGYLADRFGR
RTVLAATAAAIAAFSGFAPQLLDAGQAGEASFMILGFLLLGLSFGQSSGALSSNFTPRHRYTGSAFTADLAWLFGAGFAP
MVALWLSSEFGLIAAGAYLLSGAIVTLVALWLNRELARTID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Escherichia coli, GI1789941, Length=441, Percent_Identity=36.9614512471655, Blast_Score=221, Evalue=5e-59,
Organism=Escherichia coli, GI1788292, Length=424, Percent_Identity=28.7735849056604, Blast_Score=149, Evalue=5e-37,
Organism=Escherichia coli, GI1790550, Length=419, Percent_Identity=27.6849642004773, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1788942, Length=410, Percent_Identity=29.5121951219512, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004736
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005828
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1; PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 47207; Mature: 47075

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAADTVPTTEAERDARALHDHDGHRIDPAEIAIGVIIGRTSEFFDFFVYAIASVLVFPKL
CCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHH
VFPHLDPLAGTLWSFAIFALAFVARPVGTVIFTAIDRGYGRGAKLTIALFLLGGSTAAIA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCEEEE
FLPGYESIGIGAALLLALFRMGQGVALGGSWDGLASLLALNAPESKRGWYAMIPQLGAPL
EECCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCCCCEEECHHHCCCH
GLIVASLLFMFLISALPAEDFLAWGWRYPFFVAFAINVVALFARLRIVVTPDYAELFENR
HHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHCC
ALQPAPLLETVRSEWKTIVTGAFAPLASFAMFHMVTVYPLSWVFLFTDETPARFLMIEAI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHH
AAVGGVIAIIASGYLADRFGRRTVLAATAAAIAAFSGFAPQLLDAGQAGEASFMILGFLL
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHH
LGLSFGQSSGALSSNFTPRHRYTGSAFTADLAWLFGAGFAPMVALWLSSEFGLIAAGAYL
HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHH
LSGAIVTLVALWLNRELARTID
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AADTVPTTEAERDARALHDHDGHRIDPAEIAIGVIIGRTSEFFDFFVYAIASVLVFPKL
CCCCCCCCCHHHHHHHHHCCCCCCCCHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHH
VFPHLDPLAGTLWSFAIFALAFVARPVGTVIFTAIDRGYGRGAKLTIALFLLGGSTAAIA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCEEEE
FLPGYESIGIGAALLLALFRMGQGVALGGSWDGLASLLALNAPESKRGWYAMIPQLGAPL
EECCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCCCCEEECHHHCCCH
GLIVASLLFMFLISALPAEDFLAWGWRYPFFVAFAINVVALFARLRIVVTPDYAELFENR
HHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHCC
ALQPAPLLETVRSEWKTIVTGAFAPLASFAMFHMVTVYPLSWVFLFTDETPARFLMIEAI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHH
AAVGGVIAIIASGYLADRFGRRTVLAATAAAIAAFSGFAPQLLDAGQAGEASFMILGFLL
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHH
LGLSFGQSSGALSSNFTPRHRYTGSAFTADLAWLFGAGFAPMVALWLSSEFGLIAAGAYL
HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHH
LSGAIVTLVALWLNRELARTID
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]