| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is paaG [H]
Identifier: 103486972
GI number: 103486972
Start: 1551452
End: 1552255
Strand: Direct
Name: paaG [H]
Synonym: Sala_1487
Alternate gene names: 103486972
Gene position: 1551452-1552255 (Clockwise)
Preceding gene: 103486967
Following gene: 103486976
Centisome position: 46.38
GC content: 66.92
Gene sequence:
>804_bases ATGACCGACCTGCCCGCTTTCGACACGATCAGGCTCGACTTCGCCGATGCCGTCGCGACGATCACGCTCAACCGCCCCGA CCGGCTCAATTCGATGCCGCCGGAAATGGCCGACGAGATCCGCGCCGCGCTCGATCACCTGCCCGCCCTCGGCGCGCGCG CGCTGCTCATCACGGGCGAAGGTCGCGGCTTTTGTTCGGGCGCCGACCTCGCGGGCGACCGTTCGGGCGGCGCCGTCGGC GGTGGCGCACGCAGCCGCAATGCGCTGCGCGGCCATTACAACCCGATGTTGCTCGCGCTTGCCAACCTCGACATTCCCGT CGTCGTCGCGGTCAATGGCCCGGCGGCGGGCGTCGGGTGCAGTTTCGCGCTGTCGGGCGATTTCACCATCGCGGGCAAGA GCGCCTATTTCCTCCAGGCATTCGTGAACATCGGCCTTGTCCCCGATGGCGGTTCGTCGTGGCTGCTGCCGCGCCTGGTC GGTGTGCCGCGGGCGTTGCAGATGATGATGCTGGGCGAAAAGATCGGCGCCGATCAGGCCGCCGACTGGGGCATGATCTA CAAATGCGTCGACGATGCCGCGTTGATGGCCGAGGCCAAGACGCTGGCCGCACGCCTCGCCAATGGTCCGACGATCGCAC TCGGCACGATGCGCAAGCTGTTGCGCGATGGACTGTCGCAGGATTTCGCGACCACGCTCGACGCCGAAGCCAGGGGCCAG TTCATCGCGGGCGACAGCGCCGACGCGATGGAGGGCATCATGGCCTTTCAGCAGAAGCGCAAGACCGAGTTCAGAGGGAA ATAG
Upstream 100 bases:
>100_bases CACGCCGAGTCAACGCCGCGCCCCCTTGCACTCCTCCAGCAAATGCGTCACAACTTTACGTGAACGTAAAGGTAAAGCCC CAGCGAGAGGATATTTCCCC
Downstream 100 bases:
>100_bases CCCCGCACCGCCCGATCCCGTTCGTGTCGGGCGAAGTCGAGACACCCCGAAGGCAAGCGCAAAGCCGATTGGCATCTCGA CCTCGCTCGATGCGCTCGAT
Product: enoyl-CoA hydratase/isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTDLPAFDTIRLDFADAVATITLNRPDRLNSMPPEMADEIRAALDHLPALGARALLITGEGRGFCSGADLAGDRSGGAVG GGARSRNALRGHYNPMLLALANLDIPVVVAVNGPAAGVGCSFALSGDFTIAGKSAYFLQAFVNIGLVPDGGSSWLLPRLV GVPRALQMMMLGEKIGADQAADWGMIYKCVDDAALMAEAKTLAARLANGPTIALGTMRKLLRDGLSQDFATTLDAEARGQ FIAGDSADAMEGIMAFQQKRKTEFRGK
Sequences:
>Translated_267_residues MTDLPAFDTIRLDFADAVATITLNRPDRLNSMPPEMADEIRAALDHLPALGARALLITGEGRGFCSGADLAGDRSGGAVG GGARSRNALRGHYNPMLLALANLDIPVVVAVNGPAAGVGCSFALSGDFTIAGKSAYFLQAFVNIGLVPDGGSSWLLPRLV GVPRALQMMMLGEKIGADQAADWGMIYKCVDDAALMAEAKTLAARLANGPTIALGTMRKLLRDGLSQDFATTLDAEARGQ FIAGDSADAMEGIMAFQQKRKTEFRGK >Mature_266_residues TDLPAFDTIRLDFADAVATITLNRPDRLNSMPPEMADEIRAALDHLPALGARALLITGEGRGFCSGADLAGDRSGGAVGG GARSRNALRGHYNPMLLALANLDIPVVVAVNGPAAGVGCSFALSGDFTIAGKSAYFLQAFVNIGLVPDGGSSWLLPRLVG VPRALQMMMLGEKIGADQAADWGMIYKCVDDAALMAEAKTLAARLANGPTIALGTMRKLLRDGLSQDFATTLDAEARGQF IAGDSADAMEGIMAFQQKRKTEFRGK
Specific function: Could possibly oxidize fatty acids using specific components [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=257, Percent_Identity=28.7937743190661, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI45643119, Length=258, Percent_Identity=24.4186046511628, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI260275230, Length=258, Percent_Identity=24.4186046511628, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI260274832, Length=258, Percent_Identity=24.4186046511628, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI221136756, Length=242, Percent_Identity=25.6198347107438, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI221136753, Length=242, Percent_Identity=25.6198347107438, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI221307494, Length=242, Percent_Identity=25.6198347107438, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI116235487, Length=237, Percent_Identity=26.5822784810127, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI31542718, Length=252, Percent_Identity=27.7777777777778, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI25453481, Length=254, Percent_Identity=25.9842519685039, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI51538573, Length=254, Percent_Identity=25.9842519685039, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI4757968, Length=257, Percent_Identity=24.5136186770428, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI49355787, Length=257, Percent_Identity=24.5136186770428, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI4757966, Length=254, Percent_Identity=25.5905511811024, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI51538581, Length=254, Percent_Identity=25.5905511811024, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI68989263, Length=224, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI20127408, Length=179, Percent_Identity=28.4916201117318, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI1787660, Length=251, Percent_Identity=44.2231075697211, Blast_Score=176, Evalue=2e-45, Organism=Escherichia coli, GI221142681, Length=283, Percent_Identity=28.2685512367491, Blast_Score=100, Evalue=9e-23, Organism=Escherichia coli, GI1787659, Length=255, Percent_Identity=31.3725490196078, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1788597, Length=270, Percent_Identity=28.8888888888889, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788682, Length=197, Percent_Identity=26.3959390862944, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1790281, Length=205, Percent_Identity=27.8048780487805, Blast_Score=66, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17535521, Length=248, Percent_Identity=28.2258064516129, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI25145438, Length=247, Percent_Identity=28.7449392712551, Blast_Score=97, Evalue=9e-21, Organism=Caenorhabditis elegans, GI17554946, Length=253, Percent_Identity=27.6679841897233, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17549921, Length=221, Percent_Identity=24.8868778280543, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17536985, Length=262, Percent_Identity=25.9541984732824, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17560910, Length=248, Percent_Identity=22.9838709677419, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17540714, Length=225, Percent_Identity=26.2222222222222, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17540306, Length=258, Percent_Identity=26.7441860465116, Blast_Score=69, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6320241, Length=187, Percent_Identity=27.807486631016, Blast_Score=67, Evalue=4e-12, Organism=Drosophila melanogaster, GI20129971, Length=252, Percent_Identity=29.7619047619048, Blast_Score=105, Evalue=2e-23, Organism=Drosophila melanogaster, GI24653477, Length=252, Percent_Identity=29.7619047619048, Blast_Score=105, Evalue=2e-23, Organism=Drosophila melanogaster, GI24654903, Length=239, Percent_Identity=24.2677824267782, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI24653139, Length=265, Percent_Identity=27.9245283018868, Blast_Score=82, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR011968 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 27971; Mature: 27839
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLPAFDTIRLDFADAVATITLNRPDRLNSMPPEMADEIRAALDHLPALGARALLITGE CCCCCCCCEEEEEECCEEEEEEECCCHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEC GRGFCSGADLAGDRSGGAVGGGARSRNALRGHYNPMLLALANLDIPVVVAVNGPAAGVGC CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEEEECCCCEEEEEECCCCCCCCE SFALSGDFTIAGKSAYFLQAFVNIGLVPDGGSSWLLPRLVGVPRALQMMMLGEKIGADQA EEEECCCEEEECCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCC ADWGMIYKCVDDAALMAEAKTLAARLANGPTIALGTMRKLLRDGLSQDFATTLDAEARGQ CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCHHHHHHCCHHHCCC FIAGDSADAMEGIMAFQQKRKTEFRGK EEECCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TDLPAFDTIRLDFADAVATITLNRPDRLNSMPPEMADEIRAALDHLPALGARALLITGE CCCCCCCEEEEEECCEEEEEEECCCHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEC GRGFCSGADLAGDRSGGAVGGGARSRNALRGHYNPMLLALANLDIPVVVAVNGPAAGVGC CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEEEECCCCEEEEEECCCCCCCCE SFALSGDFTIAGKSAYFLQAFVNIGLVPDGGSSWLLPRLVGVPRALQMMMLGEKIGADQA EEEECCCEEEECCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCC ADWGMIYKCVDDAALMAEAKTLAARLANGPTIALGTMRKLLRDGLSQDFATTLDAEARGQ CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCHHHHHHCCHHHCCC FIAGDSADAMEGIMAFQQKRKTEFRGK EEECCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9097039; 9278503; 10766858 [H]