| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486967
Identifier: 103486967
GI number: 103486967
Start: 1540387
End: 1540581
Strand: Direct
Name: 103486967
Synonym: Sala_1482
Alternate gene names: NA
Gene position: 1540387-1540581 (Clockwise)
Preceding gene: 103486966
Following gene: 103486972
Centisome position: 46.05
GC content: 68.21
Gene sequence:
>195_bases GTGTCGGCCACCACCGAATTCTACCTCGCCCAGGCGCAGCGTTGCACCGCAGAGGCCGACGCGTCCGGGCTCGACCGGGT CCGCGAGCGCAATCTGCGCGCCGCTGCGGCGTGGCAGGCGATGGCCGACAAGCTGCTCCACACCGAAAAATTGCGCGCCG AAAAGGTGCGCGTTGCCGATGCCATGCCCGAATGA
Upstream 100 bases:
>100_bases CCCGACGCTGTCGCGGCGCGAATTGCGGCGCCTGATCGCCGATATGGTCGACTGATCCGCGCCGCCTGTTTTCCGGCCCC ATTTTCAGGAGCAAAGCCCC
Downstream 100 bases:
>100_bases TCGGGCATCCAATCGGCTAGGGTCCTGAACCTAGTTGGCGCAGGCGGCCGCCCGTGCGAGCAGCCATTCGCGCTCACGCT CATTGGCCGACAGCGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MSATTEFYLAQAQRCTAEADASGLDRVRERNLRAAAAWQAMADKLLHTEKLRAEKVRVADAMPE
Sequences:
>Translated_64_residues MSATTEFYLAQAQRCTAEADASGLDRVRERNLRAAAAWQAMADKLLHTEKLRAEKVRVADAMPE >Mature_63_residues SATTEFYLAQAQRCTAEADASGLDRVRERNLRAAAAWQAMADKLLHTEKLRAEKVRVADAMPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7135; Mature: 7004
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATTEFYLAQAQRCTAEADASGLDRVRERNLRAAAAWQAMADKLLHTEKLRAEKVRVAD CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC AMPE CCCC >Mature Secondary Structure SATTEFYLAQAQRCTAEADASGLDRVRERNLRAAAAWQAMADKLLHTEKLRAEKVRVAD CCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC AMPE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA